data_3KYN
#
_model_server_result.job_id            dUaGczPHgP11vMHpco64mA 
_model_server_result.datetime_utc      '2025-07-31 03:44:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3kyn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":100}' 
#
_entry.id    3KYN 
#
_exptl.entry_id    3KYN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.933 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COBALT (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3KYN 
_cell.length_a            76.874 
_cell.length_b            76.874 
_cell.length_c            151.851 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3KYN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc1 B O MET 1 B MET 0 1_555 D CO CO . B CO 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? 
metalc ? metalc2 B N MET 1 B MET 0 1_555 D CO CO . B CO 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
#
_chem_comp.formula           'Co 2' 
_chem_comp.formula_weight    58.933 
_chem_comp.id                CO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COBALT (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3KYN 
_atom_sites.fract_transf_matrix[1][1]    0.013008 
_atom_sites.fract_transf_matrix[1][2]    0.00751 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015021 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006585 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 CO B 1 100 1 CO CO . 
E 5 CL B 1 101 1 CL CL . 
F 5 CL B 1 102 2 CL CL . 
G 6 HOH A 1 276 2 HOH HOH . 
G 6 HOH A 2 277 3 HOH HOH . 
G 6 HOH A 3 278 4 HOH HOH . 
G 6 HOH A 4 279 5 HOH HOH . 
G 6 HOH A 5 280 9 HOH HOH . 
G 6 HOH A 6 281 12 HOH HOH . 
G 6 HOH A 7 282 13 HOH HOH . 
G 6 HOH A 8 283 14 HOH HOH . 
G 6 HOH A 9 284 15 HOH HOH . 
G 6 HOH A 10 285 16 HOH HOH . 
G 6 HOH A 11 286 19 HOH HOH . 
G 6 HOH A 12 287 20 HOH HOH . 
G 6 HOH A 13 288 22 HOH HOH . 
G 6 HOH A 14 289 23 HOH HOH . 
G 6 HOH A 15 290 25 HOH HOH . 
G 6 HOH A 16 291 29 HOH HOH . 
G 6 HOH A 17 292 30 HOH HOH . 
G 6 HOH A 18 293 31 HOH HOH . 
G 6 HOH A 19 294 33 HOH HOH . 
G 6 HOH A 20 295 34 HOH HOH . 
G 6 HOH A 21 296 35 HOH HOH . 
G 6 HOH A 22 297 36 HOH HOH . 
G 6 HOH A 23 298 38 HOH HOH . 
G 6 HOH A 24 299 39 HOH HOH . 
G 6 HOH A 25 300 40 HOH HOH . 
G 6 HOH A 26 301 41 HOH HOH . 
G 6 HOH A 27 302 42 HOH HOH . 
G 6 HOH A 28 303 43 HOH HOH . 
G 6 HOH A 29 304 45 HOH HOH . 
G 6 HOH A 30 305 46 HOH HOH . 
G 6 HOH A 31 306 47 HOH HOH . 
G 6 HOH A 32 307 48 HOH HOH . 
G 6 HOH A 33 308 49 HOH HOH . 
G 6 HOH A 34 309 50 HOH HOH . 
G 6 HOH A 35 310 51 HOH HOH . 
G 6 HOH A 36 311 52 HOH HOH . 
G 6 HOH A 37 312 54 HOH HOH . 
G 6 HOH A 38 313 56 HOH HOH . 
G 6 HOH A 39 314 57 HOH HOH . 
G 6 HOH A 40 315 58 HOH HOH . 
G 6 HOH A 41 316 60 HOH HOH . 
G 6 HOH A 42 317 61 HOH HOH . 
G 6 HOH A 43 318 62 HOH HOH . 
G 6 HOH A 44 319 65 HOH HOH . 
G 6 HOH A 45 320 67 HOH HOH . 
G 6 HOH A 46 321 68 HOH HOH . 
G 6 HOH A 47 322 70 HOH HOH . 
G 6 HOH A 48 323 71 HOH HOH . 
G 6 HOH A 49 324 72 HOH HOH . 
G 6 HOH A 50 325 73 HOH HOH . 
G 6 HOH A 51 326 74 HOH HOH . 
G 6 HOH A 52 327 75 HOH HOH . 
G 6 HOH A 53 328 76 HOH HOH . 
G 6 HOH A 54 329 79 HOH HOH . 
G 6 HOH A 55 330 80 HOH HOH . 
G 6 HOH A 56 331 81 HOH HOH . 
G 6 HOH A 57 332 82 HOH HOH . 
G 6 HOH A 58 333 83 HOH HOH . 
G 6 HOH A 59 334 84 HOH HOH . 
G 6 HOH A 60 335 87 HOH HOH . 
G 6 HOH A 61 336 88 HOH HOH . 
G 6 HOH A 62 337 89 HOH HOH . 
G 6 HOH A 63 338 90 HOH HOH . 
G 6 HOH A 64 339 91 HOH HOH . 
G 6 HOH A 65 340 92 HOH HOH . 
G 6 HOH A 66 341 93 HOH HOH . 
G 6 HOH A 67 342 99 HOH HOH . 
G 6 HOH A 68 343 100 HOH HOH . 
G 6 HOH A 69 344 101 HOH HOH . 
G 6 HOH A 70 345 103 HOH HOH . 
G 6 HOH A 71 346 104 HOH HOH . 
G 6 HOH A 72 347 108 HOH HOH . 
G 6 HOH A 73 348 109 HOH HOH . 
G 6 HOH A 74 349 110 HOH HOH . 
G 6 HOH A 75 350 111 HOH HOH . 
G 6 HOH A 76 351 6 HOH HOH . 
G 6 HOH A 77 352 53 HOH HOH . 
H 6 HOH B 1 103 1 HOH HOH . 
H 6 HOH B 2 104 7 HOH HOH . 
H 6 HOH B 3 105 10 HOH HOH . 
H 6 HOH B 4 106 106 HOH HOH . 
H 6 HOH B 5 107 11 HOH HOH . 
H 6 HOH B 6 108 17 HOH HOH . 
H 6 HOH B 7 109 18 HOH HOH . 
H 6 HOH B 8 110 21 HOH HOH . 
H 6 HOH B 9 111 24 HOH HOH . 
H 6 HOH B 10 112 112 HOH HOH . 
H 6 HOH B 11 113 113 HOH HOH . 
H 6 HOH B 12 114 26 HOH HOH . 
H 6 HOH B 13 115 27 HOH HOH . 
H 6 HOH B 14 116 28 HOH HOH . 
H 6 HOH B 15 117 32 HOH HOH . 
H 6 HOH B 16 118 37 HOH HOH . 
H 6 HOH B 17 119 44 HOH HOH . 
H 6 HOH B 18 120 55 HOH HOH . 
H 6 HOH B 19 121 59 HOH HOH . 
H 6 HOH B 20 122 63 HOH HOH . 
H 6 HOH B 21 123 64 HOH HOH . 
H 6 HOH B 22 124 66 HOH HOH . 
H 6 HOH B 23 125 69 HOH HOH . 
H 6 HOH B 24 126 77 HOH HOH . 
H 6 HOH B 25 127 85 HOH HOH . 
H 6 HOH B 26 128 86 HOH HOH . 
H 6 HOH B 27 129 94 HOH HOH . 
H 6 HOH B 28 130 95 HOH HOH . 
H 6 HOH B 29 131 96 HOH HOH . 
H 6 HOH B 30 132 97 HOH HOH . 
H 6 HOH B 31 133 98 HOH HOH . 
H 6 HOH B 32 134 102 HOH HOH . 
I 6 HOH P 1 11 8 HOH HOH . 
I 6 HOH P 2 78 78 HOH HOH . 
I 6 HOH P 3 105 105 HOH HOH . 
I 6 HOH P 4 107 107 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CO 
_atom_site.label_atom_id         CO 
_atom_site.label_comp_id         CO 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               5.47 
_atom_site.Cartn_y               40.858 
_atom_site.Cartn_z               59.29 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        42.4 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CO 
_atom_site.auth_comp_id          CO 
_atom_site.auth_seq_id           100 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              42 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           341 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#