data_3KYT
#
_model_server_result.job_id            z0W-a6Rddpf3qUz0H-HPTQ 
_model_server_result.datetime_utc      '2024-11-13 18:05:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3kyt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1001}' 
#
_entry.id    3KYT 
#
_exptl.entry_id    3KYT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              402.653 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            20-HYDROXYCHOLESTEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3KYT 
_cell.length_a            53.978 
_cell.length_b            53.978 
_cell.length_c            162.583 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3KYT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C27 H46 O2' 
_chem_comp.formula_weight    402.653 
_chem_comp.id                HC2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              20-HYDROXYCHOLESTEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     (3BETA,20R)-CHOLEST-5-ENE-3,20-DIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 HC2 sing 129 n n 
C1 C10 HC2 sing 130 n n 
C1 H11 HC2 sing 131 n n 
C1 H12 HC2 sing 132 n n 
C2 C3 HC2 sing 133 n n 
C2 H21 HC2 sing 134 n n 
C2 H22 HC2 sing 135 n n 
C3 C4 HC2 sing 136 n n 
C3 O1 HC2 sing 137 n n 
C3 H3 HC2 sing 138 n n 
C4 C5 HC2 sing 139 n n 
C4 H41 HC2 sing 140 n n 
C4 H42 HC2 sing 141 n n 
C5 C6 HC2 doub 142 n n 
C5 C10 HC2 sing 143 n n 
C6 C7 HC2 sing 144 n n 
C6 H6 HC2 sing 145 n n 
C7 C8 HC2 sing 146 n n 
C7 H71 HC2 sing 147 n n 
C7 H72 HC2 sing 148 n n 
C8 C9 HC2 sing 149 n n 
C8 C14 HC2 sing 150 n n 
C8 H8 HC2 sing 151 n n 
C9 C10 HC2 sing 152 n n 
C9 C11 HC2 sing 153 n n 
C9 H9 HC2 sing 154 n n 
C10 C19 HC2 sing 155 n n 
C11 C12 HC2 sing 156 n n 
C11 H111 HC2 sing 157 n n 
C11 H112 HC2 sing 158 n n 
C12 C13 HC2 sing 159 n n 
C12 H121 HC2 sing 160 n n 
C12 H122 HC2 sing 161 n n 
C13 C14 HC2 sing 162 n n 
C13 C17 HC2 sing 163 n n 
C13 C18 HC2 sing 164 n n 
C14 C15 HC2 sing 165 n n 
C14 H14 HC2 sing 166 n n 
C15 C16 HC2 sing 167 n n 
C15 H151 HC2 sing 168 n n 
C15 H152 HC2 sing 169 n n 
C16 C17 HC2 sing 170 n n 
C16 H161 HC2 sing 171 n n 
C16 H162 HC2 sing 172 n n 
C17 C20 HC2 sing 173 n n 
C17 H17 HC2 sing 174 n n 
C18 H181 HC2 sing 175 n n 
C18 H182 HC2 sing 176 n n 
C18 H183 HC2 sing 177 n n 
C19 H191 HC2 sing 178 n n 
C19 H192 HC2 sing 179 n n 
C19 H193 HC2 sing 180 n n 
C20 C21 HC2 sing 181 n n 
C20 C22 HC2 sing 182 n n 
C20 O2 HC2 sing 183 n n 
C21 H211 HC2 sing 184 n n 
C21 H212 HC2 sing 185 n n 
C21 H213 HC2 sing 186 n n 
C22 C23 HC2 sing 187 n n 
C22 H221 HC2 sing 188 n n 
C22 H222 HC2 sing 189 n n 
C23 C24 HC2 sing 190 n n 
C23 H231 HC2 sing 191 n n 
C23 H232 HC2 sing 192 n n 
C24 C25 HC2 sing 193 n n 
C24 H241 HC2 sing 194 n n 
C24 H242 HC2 sing 195 n n 
C25 C26 HC2 sing 196 n n 
C25 C27 HC2 sing 197 n n 
C25 H25 HC2 sing 198 n n 
C26 H261 HC2 sing 199 n n 
C26 H262 HC2 sing 200 n n 
C26 H263 HC2 sing 201 n n 
C27 H271 HC2 sing 202 n n 
C27 H272 HC2 sing 203 n n 
C27 H273 HC2 sing 204 n n 
O1 HO1 HC2 sing 205 n n 
O2 HO2 HC2 sing 206 n n 
#
_atom_sites.entry_id                     3KYT 
_atom_sites.fract_transf_matrix[1][1]    0.018526 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018526 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006151 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 HC2 A 1 1001 1001 HC2 HC2 . 
D 4 HOH A 1 1 1 HOH HOH . 
D 4 HOH A 2 2 2 HOH HOH . 
D 4 HOH A 3 3 3 HOH HOH . 
D 4 HOH A 4 4 4 HOH HOH . 
D 4 HOH A 5 5 5 HOH HOH . 
D 4 HOH A 6 6 6 HOH HOH . 
D 4 HOH A 7 7 7 HOH HOH . 
D 4 HOH A 8 8 8 HOH HOH . 
D 4 HOH A 9 9 9 HOH HOH . 
D 4 HOH A 10 10 10 HOH HOH . 
D 4 HOH A 11 11 11 HOH HOH . 
D 4 HOH A 12 12 12 HOH HOH . 
D 4 HOH A 13 13 13 HOH HOH . 
D 4 HOH A 14 14 14 HOH HOH . 
D 4 HOH A 15 15 15 HOH HOH . 
D 4 HOH A 16 16 16 HOH HOH . 
D 4 HOH A 17 18 18 HOH HOH . 
D 4 HOH A 18 19 19 HOH HOH . 
D 4 HOH A 19 20 20 HOH HOH . 
D 4 HOH A 20 21 21 HOH HOH . 
D 4 HOH A 21 23 23 HOH HOH . 
D 4 HOH A 22 24 24 HOH HOH . 
D 4 HOH A 23 25 25 HOH HOH . 
D 4 HOH A 24 26 26 HOH HOH . 
D 4 HOH A 25 27 27 HOH HOH . 
D 4 HOH A 26 28 28 HOH HOH . 
D 4 HOH A 27 29 29 HOH HOH . 
D 4 HOH A 28 30 30 HOH HOH . 
D 4 HOH A 29 31 31 HOH HOH . 
D 4 HOH A 30 32 32 HOH HOH . 
D 4 HOH A 31 33 33 HOH HOH . 
D 4 HOH A 32 34 34 HOH HOH . 
D 4 HOH A 33 35 35 HOH HOH . 
D 4 HOH A 34 36 36 HOH HOH . 
D 4 HOH A 35 37 37 HOH HOH . 
D 4 HOH A 36 38 38 HOH HOH . 
D 4 HOH A 37 39 39 HOH HOH . 
D 4 HOH A 38 40 40 HOH HOH . 
D 4 HOH A 39 41 41 HOH HOH . 
D 4 HOH A 40 42 42 HOH HOH . 
D 4 HOH A 41 43 43 HOH HOH . 
D 4 HOH A 42 44 44 HOH HOH . 
D 4 HOH A 43 45 45 HOH HOH . 
D 4 HOH A 44 46 46 HOH HOH . 
D 4 HOH A 45 47 47 HOH HOH . 
D 4 HOH A 46 48 48 HOH HOH . 
D 4 HOH A 47 50 50 HOH HOH . 
D 4 HOH A 48 51 51 HOH HOH . 
D 4 HOH A 49 52 52 HOH HOH . 
D 4 HOH A 50 53 53 HOH HOH . 
D 4 HOH A 51 54 54 HOH HOH . 
D 4 HOH A 52 55 55 HOH HOH . 
D 4 HOH A 53 56 56 HOH HOH . 
D 4 HOH A 54 57 57 HOH HOH . 
D 4 HOH A 55 58 58 HOH HOH . 
D 4 HOH A 56 59 59 HOH HOH . 
D 4 HOH A 57 60 60 HOH HOH . 
D 4 HOH A 58 61 61 HOH HOH . 
D 4 HOH A 59 63 63 HOH HOH . 
D 4 HOH A 60 64 64 HOH HOH . 
D 4 HOH A 61 65 65 HOH HOH . 
D 4 HOH A 62 66 66 HOH HOH . 
D 4 HOH A 63 67 67 HOH HOH . 
D 4 HOH A 64 68 68 HOH HOH . 
D 4 HOH A 65 69 69 HOH HOH . 
D 4 HOH A 66 70 70 HOH HOH . 
D 4 HOH A 67 72 72 HOH HOH . 
D 4 HOH A 68 73 73 HOH HOH . 
D 4 HOH A 69 74 74 HOH HOH . 
D 4 HOH A 70 75 75 HOH HOH . 
D 4 HOH A 71 76 76 HOH HOH . 
D 4 HOH A 72 77 77 HOH HOH . 
D 4 HOH A 73 78 78 HOH HOH . 
D 4 HOH A 74 79 79 HOH HOH . 
D 4 HOH A 75 80 80 HOH HOH . 
D 4 HOH A 76 81 81 HOH HOH . 
D 4 HOH A 77 82 82 HOH HOH . 
D 4 HOH A 78 83 83 HOH HOH . 
D 4 HOH A 79 84 84 HOH HOH . 
D 4 HOH A 80 85 85 HOH HOH . 
D 4 HOH A 81 86 86 HOH HOH . 
D 4 HOH A 82 87 87 HOH HOH . 
D 4 HOH A 83 88 88 HOH HOH . 
D 4 HOH A 84 89 89 HOH HOH . 
D 4 HOH A 85 90 90 HOH HOH . 
D 4 HOH A 86 91 91 HOH HOH . 
D 4 HOH A 87 92 92 HOH HOH . 
D 4 HOH A 88 93 93 HOH HOH . 
D 4 HOH A 89 94 94 HOH HOH . 
D 4 HOH A 90 95 95 HOH HOH . 
D 4 HOH A 91 96 96 HOH HOH . 
D 4 HOH A 92 97 97 HOH HOH . 
D 4 HOH A 93 98 98 HOH HOH . 
D 4 HOH A 94 99 99 HOH HOH . 
D 4 HOH A 95 101 101 HOH HOH . 
D 4 HOH A 96 102 102 HOH HOH . 
D 4 HOH A 97 103 103 HOH HOH . 
D 4 HOH A 98 104 104 HOH HOH . 
D 4 HOH A 99 105 105 HOH HOH . 
D 4 HOH A 100 106 106 HOH HOH . 
E 4 HOH C 1 17 17 HOH HOH . 
E 4 HOH C 2 22 22 HOH HOH . 
E 4 HOH C 3 49 49 HOH HOH . 
E 4 HOH C 4 71 71 HOH HOH . 
E 4 HOH C 5 100 100 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 HC2 . . . C 3 -24.934 -0.158 -18.836 1 22.55 ? C1 HC2 1001 A 1 
HETATM 2 C C2 HC2 . . . C 3 -24.695 -1.69 -18.886 1 25.09 ? C2 HC2 1001 A 1 
HETATM 3 C C3 HC2 . . . C 3 -24.267 -2.337 -17.553 1 24.48 ? C3 HC2 1001 A 1 
HETATM 4 C C4 HC2 . . . C 3 -25.129 -1.837 -16.379 1 22.31 ? C4 HC2 1001 A 1 
HETATM 5 C C5 HC2 . . . C 3 -25.005 -0.328 -16.331 1 20.56 ? C5 HC2 1001 A 1 
HETATM 6 C C6 HC2 . . . C 3 -24.48 0.243 -15.221 1 21.37 ? C6 HC2 1001 A 1 
HETATM 7 C C7 HC2 . . . C 3 -24.602 1.733 -14.876 1 23.62 ? C7 HC2 1001 A 1 
HETATM 8 C C8 HC2 . . . C 3 -25.347 2.515 -15.954 1 27.6 ? C8 HC2 1001 A 1 
HETATM 9 C C9 HC2 . . . C 3 -25.045 1.933 -17.366 1 25.41 ? C9 HC2 1001 A 1 
HETATM 10 C C10 HC2 . . . C 3 -25.494 0.468 -17.538 1 22.92 ? C10 HC2 1001 A 1 
HETATM 11 C C11 HC2 . . . C 3 -25.643 2.8 -18.493 1 27.26 ? C11 HC2 1001 A 1 
HETATM 12 C C12 HC2 . . . C 3 -25.476 4.319 -18.355 1 31.98 ? C12 HC2 1001 A 1 
HETATM 13 C C13 HC2 . . . C 3 -25.804 4.837 -16.94 1 31.72 ? C13 HC2 1001 A 1 
HETATM 14 C C14 HC2 . . . C 3 -24.993 4.005 -15.955 1 30.2 ? C14 HC2 1001 A 1 
HETATM 15 C C15 HC2 . . . C 3 -24.954 4.802 -14.648 1 30.97 ? C15 HC2 1001 A 1 
HETATM 16 C C16 HC2 . . . C 3 -24.972 6.244 -15.137 1 31.89 ? C16 HC2 1001 A 1 
HETATM 17 C C17 HC2 . . . C 3 -25.159 6.191 -16.669 1 33.04 ? C17 HC2 1001 A 1 
HETATM 18 C C18 HC2 . . . C 3 -27.313 4.732 -16.673 1 32.62 ? C18 HC2 1001 A 1 
HETATM 19 C C19 HC2 . . . C 3 -27.036 0.399 -17.593 1 18.75 ? C19 HC2 1001 A 1 
HETATM 20 C C20 HC2 . . . C 3 -25.789 7.464 -17.307 1 36.08 ? C20 HC2 1001 A 1 
HETATM 21 C C21 HC2 . . . C 3 -25.961 7.377 -18.831 1 31.27 ? C21 HC2 1001 A 1 
HETATM 22 C C22 HC2 . . . C 3 -24.896 8.704 -17.059 1 39 ? C22 HC2 1001 A 1 
HETATM 23 C C23 HC2 . . . C 3 -23.408 8.485 -17.407 1 40.48 ? C23 HC2 1001 A 1 
HETATM 24 C C24 HC2 . . . C 3 -22.541 9.7 -17.083 1 42.17 ? C24 HC2 1001 A 1 
HETATM 25 C C25 HC2 . . . C 3 -22.295 9.849 -15.574 1 44.22 ? C25 HC2 1001 A 1 
HETATM 26 C C26 HC2 . . . C 3 -21.125 9.027 -15.009 1 43.07 ? C26 HC2 1001 A 1 
HETATM 27 C C27 HC2 . . . C 3 -22.143 11.321 -15.24 1 45.11 ? C27 HC2 1001 A 1 
HETATM 28 O O1 HC2 . . . C 3 -24.319 -3.773 -17.601 1 21.61 ? O1 HC2 1001 A 1 
HETATM 29 O O2 HC2 . . . C 3 -27.056 7.693 -16.64 1 36.37 ? O2 HC2 1001 A 1 
#
_model_server_stats.io_time_ms              41 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           225 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           29 
#