data_3KZ0 # _model_server_result.job_id yeFgMlYpeDf90550Um0aUg _model_server_result.datetime_utc '2025-05-24 23:58:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kz0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":3}' # _entry.id 3KZ0 # _exptl.entry_id 3KZ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KZ0 _cell.length_a 64.325 _cell.length_b 121.523 _cell.length_c 46.379 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KZ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,M,O 1 1 B,D,I,J,K,L,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 117 A CYS 286 1_555 B SG CYS 117 B CYS 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc1 E ZN ZN . A ZN 1 1_555 A NE2 HIS 55 A HIS 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc2 E ZN ZN . A ZN 1 1_555 M O HOH . A HOH 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc3 E ZN ZN . A ZN 1 1_555 C OE2 GLU 16 C GLU 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc4 E ZN ZN . A ZN 1 1_555 C OE1 GLU 16 C GLU 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc5 G ZN ZN . A ZN 2 1_555 A OD1 ASP 72 A ASP 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc6 G ZN ZN . A ZN 2 1_555 B OE2 GLU 123 B GLU 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc7 F ZN ZN . A ZN 4 1_555 A OD2 ASP 135 A ASP 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc8 A OE2 GLU 123 A GLU 292 1_555 L ZN ZN . B ZN 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc9 L ZN ZN . B ZN 1 1_555 B OE2 GLU 71 B GLU 240 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc10 L ZN ZN . B ZN 1 1_555 B OD1 ASP 72 B ASP 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc11 L ZN ZN . B ZN 1 1_555 B OD2 ASP 72 B ASP 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc12 I ZN ZN . B ZN 2 1_555 N O HOH . B HOH 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc13 I ZN ZN . B ZN 2 1_555 B NE2 HIS 55 B HIS 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc14 I ZN ZN . B ZN 2 1_555 D OE2 GLU 16 D GLU 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc15 I ZN ZN . B ZN 2 1_555 D OE1 GLU 16 D GLU 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.695 ? metalc ? metalc16 I ZN ZN . B ZN 2 1_555 P O HOH . D HOH 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc17 J ZN ZN . B ZN 3 1_555 N O HOH . B HOH 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? metalc ? metalc18 J ZN ZN . B ZN 3 1_555 N O HOH . B HOH 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc19 J ZN ZN . B ZN 3 1_555 B OD2 ASP 135 B ASP 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3KZ0 _atom_sites.fract_transf_matrix[1][1] 0.015546 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008229 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021561 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 1 1 ZN ZN . F 3 ZN A 1 4 4 ZN ZN . G 3 ZN A 1 2 2 ZN ZN . H 4 SO4 A 1 328 328 SO4 SO4 . I 3 ZN B 1 2 2 ZN ZN . J 3 ZN B 1 3 3 ZN ZN . K 3 ZN B 1 5 5 ZN ZN . L 3 ZN B 1 1 1 ZN ZN . M 5 HOH A 1 5 5 HOH HOH . M 5 HOH A 2 7 7 HOH HOH . M 5 HOH A 3 14 14 HOH HOH . M 5 HOH A 4 22 22 HOH HOH . M 5 HOH A 5 24 24 HOH HOH . M 5 HOH A 6 25 25 HOH HOH . M 5 HOH A 7 27 27 HOH HOH . M 5 HOH A 8 33 33 HOH HOH . M 5 HOH A 9 34 34 HOH HOH . M 5 HOH A 10 35 35 HOH HOH . M 5 HOH A 11 39 39 HOH HOH . M 5 HOH A 12 45 45 HOH HOH . M 5 HOH A 13 46 46 HOH HOH . M 5 HOH A 14 49 49 HOH HOH . M 5 HOH A 15 53 53 HOH HOH . M 5 HOH A 16 61 61 HOH HOH . M 5 HOH A 17 69 69 HOH HOH . M 5 HOH A 18 71 71 HOH HOH . M 5 HOH A 19 73 73 HOH HOH . M 5 HOH A 20 76 76 HOH HOH . M 5 HOH A 21 78 78 HOH HOH . M 5 HOH A 22 84 84 HOH HOH . M 5 HOH A 23 329 329 HOH HOH . M 5 HOH A 24 330 24 HOH HOH . M 5 HOH A 25 331 4 HOH HOH . N 5 HOH B 1 7 7 HOH HOH . N 5 HOH B 2 8 8 HOH HOH . N 5 HOH B 3 9 9 HOH HOH . N 5 HOH B 4 11 11 HOH HOH . N 5 HOH B 5 13 13 HOH HOH . N 5 HOH B 6 15 15 HOH HOH . N 5 HOH B 7 16 16 HOH HOH . N 5 HOH B 8 19 19 HOH HOH . N 5 HOH B 9 21 21 HOH HOH . N 5 HOH B 10 29 29 HOH HOH . N 5 HOH B 11 30 30 HOH HOH . N 5 HOH B 12 31 31 HOH HOH . N 5 HOH B 13 37 37 HOH HOH . N 5 HOH B 14 40 40 HOH HOH . N 5 HOH B 15 44 44 HOH HOH . N 5 HOH B 16 47 47 HOH HOH . N 5 HOH B 17 48 48 HOH HOH . N 5 HOH B 18 50 50 HOH HOH . N 5 HOH B 19 52 52 HOH HOH . N 5 HOH B 20 54 54 HOH HOH . N 5 HOH B 21 55 55 HOH HOH . N 5 HOH B 22 56 56 HOH HOH . N 5 HOH B 23 60 60 HOH HOH . N 5 HOH B 24 65 65 HOH HOH . N 5 HOH B 25 75 75 HOH HOH . N 5 HOH B 26 79 79 HOH HOH . N 5 HOH B 27 83 83 HOH HOH . N 5 HOH B 28 328 3 HOH HOH . N 5 HOH B 29 329 8 HOH HOH . N 5 HOH B 30 330 330 HOH HOH . O 5 HOH C 1 25 25 HOH HOH . O 5 HOH C 2 26 6 HOH HOH . O 5 HOH C 3 27 27 HOH HOH . O 5 HOH C 4 28 28 HOH HOH . O 5 HOH C 5 32 32 HOH HOH . O 5 HOH C 6 36 36 HOH HOH . O 5 HOH C 7 51 51 HOH HOH . O 5 HOH C 8 57 57 HOH HOH . O 5 HOH C 9 58 58 HOH HOH . O 5 HOH C 10 72 72 HOH HOH . O 5 HOH C 11 81 81 HOH HOH . P 5 HOH D 1 24 24 HOH HOH . P 5 HOH D 2 25 25 HOH HOH . P 5 HOH D 3 26 26 HOH HOH . P 5 HOH D 4 27 1 HOH HOH . P 5 HOH D 5 28 2 HOH HOH . P 5 HOH D 6 29 9 HOH HOH . P 5 HOH D 7 80 80 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x -34.395 _atom_site.Cartn_y -20.213 _atom_site.Cartn_z 0.708 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 3 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #