data_3KZI
#
_model_server_result.job_id            ZU6MDZJaiM2KP6oB8sWB_g 
_model_server_result.datetime_utc      '2024-12-21 15:43:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3kzi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Y","auth_seq_id":367}' 
#
_entry.id    3KZI 
#
_exptl.entry_id    3KZI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              195.237 
_entity.id                          23 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3KZI 
_cell.length_a            119.89 
_cell.length_b            224.69 
_cell.length_c            337.28 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3KZI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    nonadecameric 
_pdbx_struct_assembly.oligomeric_count      19 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC,IC,JC,KC,LC,MC,NC,OC,PC,QC,RC,SC,TC,UC,VC,WC,XC,YC,ZC,AD,BD 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      23 
_struct_asym.id                             Y 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 M SG CYS 19 O CYS 45 1_555 M SG CYS 44 O CYS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
metalc ? metalc1 A OD2 ASP 170 A ASP 170 1_555 Z MN4 OEC . A OEC 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? 
metalc ? metalc2 A OD1 ASP 170 A ASP 170 1_555 Z CA1 OEC . A OEC 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.94 ? 
metalc ? metalc3 A OE2 GLU 189 A GLU 189 1_555 Z MN1 OEC . A OEC 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.727 ? 
metalc ? metalc4 A OE1 GLU 189 A GLU 189 1_555 Z CA1 OEC . A OEC 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? 
metalc ? metalc5 A NE2 HIS 215 A HIS 215 1_555 T FE FE2 . A FE2 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? 
metalc ? metalc6 A NE2 HIS 272 A HIS 272 1_555 T FE FE2 . A FE2 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? 
metalc ? metalc7 A NE2 HIS 332 A HIS 332 1_555 Z MN1 OEC . A OEC 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
metalc ? metalc8 A OE1 GLU 333 A GLU 333 1_555 Z MN3 OEC . A OEC 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc9 A OD1 ASP 342 A ASP 342 1_555 Z MN2 OEC . A OEC 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? 
metalc ? metalc10 A OD2 ASP 342 A ASP 342 1_555 Z MN1 OEC . A OEC 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? 
metalc ? metalc11 A O ALA 344 A ALA 344 1_555 Z CA1 OEC . A OEC 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? 
metalc ? metalc12 A O ALA 344 A ALA 344 1_555 Z MN2 OEC . A OEC 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? 
metalc ? metalc13 T FE FE2 . A FE2 361 1_555 D NE2 HIS 214 D HIS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? 
metalc ? metalc14 T FE FE2 . A FE2 361 1_555 D NE2 HIS 268 D HIS 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? 
metalc ? metalc15 T FE FE2 . A FE2 361 1_555 ZB O3 BCT . D BCT 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? 
metalc ? metalc16 T FE FE2 . A FE2 361 1_555 ZB O2 BCT . D BCT 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? 
metalc ? metalc17 Z MN3 OEC . A OEC 368 1_555 C OE2 GLU 342 C GLU 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc18 Z MN2 OEC . A OEC 368 1_555 C OE1 GLU 342 C GLU 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? 
metalc ? metalc19 C OD1 ASN 27 C ASN 39 1_555 PB MG CLA . C CLA 486 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.653 ? 
metalc ? metalc20 E NE2 HIS 22 E HIS 23 1_555 KC FE HEM . F HEM 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? 
metalc ? metalc21 F O ARG 44 F ARG 45 1_555 MC CA CA . F CA 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.161 ? 
metalc ? metalc22 J OD2 ASP 10 K ASP 19 1_555 TC CA CA . K CA 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? 
metalc ? metalc23 J OD1 ASP 14 K ASP 23 1_555 TC CA CA . K CA 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.953 ? 
metalc ? metalc24 J OD2 ASP 14 K ASP 23 1_555 TC CA CA . K CA 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.98 ? 
metalc ? metalc25 M OE1 GLU 114 O GLU 140 1_555 WC CA CA . O CA 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.844 ? 
metalc ? metalc26 P NE2 HIS 41 V HIS 67 1_555 ZC FE HEM . V HEM 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
metalc ? metalc27 P NE2 HIS 92 V HIS 118 1_555 ZC FE HEM . V HEM 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
#
_chem_comp.formula           'C6 H13 N O4 S' 
_chem_comp.formula_weight    195.237 
_chem_comp.id                MES 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C2 MES sing 1053 n n 
O1 C6 MES sing 1054 n n 
C2 C3 MES sing 1055 n n 
C2 H21 MES sing 1056 n n 
C2 H22 MES sing 1057 n n 
C3 N4 MES sing 1058 n n 
C3 H31 MES sing 1059 n n 
C3 H32 MES sing 1060 n n 
N4 C5 MES sing 1061 n n 
N4 C7 MES sing 1062 n n 
N4 HN4 MES sing 1063 n n 
C5 C6 MES sing 1064 n n 
C5 H51 MES sing 1065 n n 
C5 H52 MES sing 1066 n n 
C6 H61 MES sing 1067 n n 
C6 H62 MES sing 1068 n n 
C7 C8 MES sing 1069 n n 
C7 H71 MES sing 1070 n n 
C7 H72 MES sing 1071 n n 
C8 S MES sing 1072 n n 
C8 H81 MES sing 1073 n n 
C8 H82 MES sing 1074 n n 
S O1S MES doub 1075 n n 
S O2S MES doub 1076 n n 
S O3S MES sing 1077 n n 
#
_atom_sites.entry_id                     3KZI 
_atom_sites.fract_transf_matrix[1][1]    0.008341 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004451 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002965 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
T 20 FE2 A 1 361 361 FE2 FE2 . 
U 21 CLA A 1 362 362 CLA CLA . 
V 21 CLA A 1 363 363 CLA CLA . 
W 22 PHO A 1 365 365 PHO PHO . 
X 21 CLA A 1 366 366 CLA CLA . 
Y 23 MES A 1 367 367 MES MES . 
Z 24 OEC A 1 368 368 OEC OEC . 
AA 25 BCR A 1 369 369 BCR BCR . 
BA 26 LHG A 1 371 371 LHG LHG . 
CA 27 LMG A 1 373 373 LMG LMG . 
DA 28 DGD A 1 375 375 DGD DGD . 
EA 29 LMT A 1 376 376 LMT LMT . 
FA 21 CLA A 1 364 364 CLA CLA . 
GA 21 CLA B 1 511 511 CLA CLA . 
HA 21 CLA B 1 512 512 CLA CLA . 
IA 21 CLA B 1 513 513 CLA CLA . 
JA 21 CLA B 1 514 514 CLA CLA . 
KA 21 CLA B 1 515 515 CLA CLA . 
LA 21 CLA B 1 516 516 CLA CLA . 
MA 21 CLA B 1 517 517 CLA CLA . 
NA 21 CLA B 1 518 518 CLA CLA . 
OA 21 CLA B 1 519 519 CLA CLA . 
PA 21 CLA B 1 520 520 CLA CLA . 
QA 21 CLA B 1 521 521 CLA CLA . 
RA 21 CLA B 1 522 522 CLA CLA . 
SA 21 CLA B 1 523 523 CLA CLA . 
TA 21 CLA B 1 524 524 CLA CLA . 
UA 21 CLA B 1 525 525 CLA CLA . 
VA 21 CLA B 1 526 526 CLA CLA . 
WA 25 BCR B 1 527 527 BCR BCR . 
XA 25 BCR B 1 529 529 BCR BCR . 
YA 25 BCR B 1 530 530 BCR BCR . 
ZA 27 LMG B 1 531 531 LMG LMG . 
AB 28 DGD B 1 533 533 DGD DGD . 
BB 29 LMT B 1 535 535 LMT LMT . 
CB 28 DGD B 1 528 208 DGD DGD . 
DB 28 DGD C 1 474 370 DGD DGD . 
EB 30 SQD C 1 475 372 SQD SQD . 
FB 26 LHG C 1 476 374 LHG LHG . 
GB 21 CLA C 1 477 474 CLA CLA . 
HB 21 CLA C 1 478 475 CLA CLA . 
IB 21 CLA C 1 479 476 CLA CLA . 
JB 21 CLA C 1 480 477 CLA CLA . 
KB 21 CLA C 1 481 478 CLA CLA . 
LB 21 CLA C 1 482 479 CLA CLA . 
MB 21 CLA C 1 483 480 CLA CLA . 
NB 21 CLA C 1 484 481 CLA CLA . 
OB 21 CLA C 1 485 482 CLA CLA . 
PB 21 CLA C 1 486 484 CLA CLA . 
QB 21 CLA C 1 487 485 CLA CLA . 
RB 21 CLA C 1 488 486 CLA CLA . 
SB 25 BCR C 1 489 487 BCR BCR . 
TB 25 BCR C 1 490 488 BCR BCR . 
UB 28 DGD C 1 491 489 DGD DGD . 
VB 28 DGD C 1 492 490 DGD DGD . 
WB 28 DGD C 1 493 491 DGD DGD . 
XB 27 LMG C 1 494 493 LMG LMG . 
YB 29 LMT D 1 536 536 LMT LMT . 
ZB 31 BCT D 1 353 353 BCT BCT . 
AC 21 CLA D 1 354 354 CLA CLA . 
BC 22 PHO D 1 355 355 PHO PHO . 
CC 21 CLA D 1 356 356 CLA CLA . 
DC 32 PL9 D 1 357 357 PL9 PL9 . 
EC 25 BCR D 1 358 358 BCR BCR . 
FC 27 LMG D 1 359 359 LMG LMG . 
GC 27 LMG D 1 360 360 LMG LMG . 
HC 30 SQD D 1 361 361 SQD SQD . 
IC 28 DGD D 1 362 362 DGD DGD . 
JC 29 LMT D 1 363 363 LMT LMT . 
KC 33 HEM F 1 85 85 HEM HEM . 
LC 30 SQD F 1 224 224 SQD SQD . 
MC 34 CA F 1 225 225 CA CA . 
NC 27 LMG I 1 220 220 LMG LMG . 
OC 29 LMT I 1 274 274 LMT LMT . 
PC 27 LMG J 1 492 492 LMG LMG . 
QC 25 BCR J 1 115 115 BCR BCR . 
RC 25 BCR J 1 112 112 BCR BCR . 
SC 21 CLA K 1 483 483 CLA CLA . 
TC 34 CA K 1 56 56 CA CA . 
UC 30 SQD L 1 213 213 SQD SQD . 
VC 27 LMG M 1 217 217 LMG LMG . 
WC 34 CA O 1 273 273 CA CA . 
XC 29 LMT O 1 274 227 LMT LMT . 
YC 29 LMT T 1 226 226 LMT LMT . 
ZC 33 HEM V 1 164 164 HEM HEM . 
AD 25 BCR X 1 107 107 BCR BCR . 
BD 25 BCR Z 1 116 116 BCR BCR . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 MES . . . Y 23 28.096 -34.882 -34.379 1 137.06 ? O1 MES 367 A 1 
HETATM 2 C C2 MES . . . Y 23 27.362 -36.031 -33.93 1 136.58 ? C2 MES 367 A 1 
HETATM 3 C C3 MES . . . Y 23 26.072 -35.577 -33.244 1 139.4 ? C3 MES 367 A 1 
HETATM 4 N N4 MES . . . Y 23 26.403 -34.725 -32.093 1 144.13 ? N4 MES 367 A 1 
HETATM 5 C C5 MES . . . Y 23 27.2 -33.576 -32.546 1 140.71 ? C5 MES 367 A 1 
HETATM 6 C C6 MES . . . Y 23 28.463 -34.077 -33.249 1 137.74 ? C6 MES 367 A 1 
HETATM 7 C C7 MES . . . Y 23 25.164 -34.245 -31.464 1 147.11 ? C7 MES 367 A 1 
HETATM 8 C C8 MES . . . Y 23 25.496 -33.567 -30.134 1 149.96 ? C8 MES 367 A 1 
HETATM 9 S S MES . . . Y 23 24.028 -32.843 -29.314 1 152.76 ? S MES 367 A 1 
HETATM 10 O O1S MES . . . Y 23 22.787 -33.277 -30.036 1 152.09 ? O1S MES 367 A 1 
HETATM 11 O O2S MES . . . Y 23 24.126 -31.347 -29.342 1 152.46 ? O2S MES 367 A 1 
HETATM 12 O O3S MES . . . Y 23 23.968 -33.313 -27.891 1 153.56 ? O3S MES 367 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    48 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           12 
#