data_3KZN # _model_server_result.job_id ZRum2ZQq6JEqGX3GpVSeLw _model_server_result.datetime_utc '2024-11-05 08:24:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kzn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":346}' # _entry.id 3KZN # _exptl.entry_id 3KZN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KZN _cell.length_a 130.198 _cell.length_b 130.198 _cell.length_c 130.198 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KZN _symmetry.cell_setting ? _symmetry.Int_Tables_number 199 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_665 -z+3/2,-x+1,y+1/2 0 0 -1 -1 0 0 0 1 0 195.297 130.198 65.099 3 'crystal symmetry operation' 10_646 -y+1,z-1/2,-x+3/2 0 -1 0 0 0 1 -1 0 0 130.198 -65.099 195.297 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id C _struct_conn.ptnr1_label_comp_id KCX _struct_conn.ptnr1_label_seq_id 322 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id KCX _struct_conn.ptnr1_auth_seq_id 302 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id ALA _struct_conn.ptnr2_label_seq_id 323 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id ALA _struct_conn.ptnr2_auth_seq_id 303 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.329 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 154 n n C1 C2 GOL sing 155 n n C1 H11 GOL sing 156 n n C1 H12 GOL sing 157 n n O1 HO1 GOL sing 158 n n C2 O2 GOL sing 159 n n C2 C3 GOL sing 160 n n C2 H2 GOL sing 161 n n O2 HO2 GOL sing 162 n n C3 O3 GOL sing 163 n n C3 H31 GOL sing 164 n n C3 H32 GOL sing 165 n n O3 HO3 GOL sing 166 n n # _atom_sites.entry_id 3KZN _atom_sites.fract_transf_matrix[1][1] 0.007681 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007681 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007681 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AOR A 1 345 345 AOR AOR . C 3 GOL A 1 346 346 GOL GOL . D 3 GOL A 1 347 347 GOL GOL . E 4 SO4 A 1 349 349 SO4 SO4 . F 4 SO4 A 1 350 350 SO4 SO4 . G 5 HOH A 1 340 1 HOH TIP . G 5 HOH A 2 341 2 HOH TIP . G 5 HOH A 3 342 3 HOH TIP . G 5 HOH A 4 343 4 HOH TIP . G 5 HOH A 5 344 5 HOH TIP . G 5 HOH A 6 348 6 HOH TIP . G 5 HOH A 7 351 7 HOH TIP . G 5 HOH A 8 352 8 HOH TIP . G 5 HOH A 9 353 9 HOH TIP . G 5 HOH A 10 354 10 HOH TIP . G 5 HOH A 11 355 11 HOH TIP . G 5 HOH A 12 356 12 HOH TIP . G 5 HOH A 13 357 13 HOH TIP . G 5 HOH A 14 358 14 HOH TIP . G 5 HOH A 15 359 15 HOH TIP . G 5 HOH A 16 360 16 HOH TIP . G 5 HOH A 17 361 17 HOH TIP . G 5 HOH A 18 362 18 HOH TIP . G 5 HOH A 19 363 19 HOH TIP . G 5 HOH A 20 364 20 HOH TIP . G 5 HOH A 21 365 22 HOH TIP . G 5 HOH A 22 366 21 HOH TIP . G 5 HOH A 23 367 23 HOH TIP . G 5 HOH A 24 368 24 HOH TIP . G 5 HOH A 25 369 25 HOH TIP . G 5 HOH A 26 370 26 HOH TIP . G 5 HOH A 27 371 27 HOH TIP . G 5 HOH A 28 372 28 HOH TIP . G 5 HOH A 29 373 29 HOH TIP . G 5 HOH A 30 374 30 HOH TIP . G 5 HOH A 31 375 31 HOH TIP . G 5 HOH A 32 376 32 HOH TIP . G 5 HOH A 33 377 33 HOH TIP . G 5 HOH A 34 378 34 HOH TIP . G 5 HOH A 35 379 35 HOH TIP . G 5 HOH A 36 380 36 HOH TIP . G 5 HOH A 37 381 37 HOH TIP . G 5 HOH A 38 382 38 HOH TIP . G 5 HOH A 39 383 39 HOH TIP . G 5 HOH A 40 384 40 HOH TIP . G 5 HOH A 41 385 41 HOH TIP . G 5 HOH A 42 386 42 HOH TIP . G 5 HOH A 43 387 43 HOH TIP . G 5 HOH A 44 388 44 HOH TIP . G 5 HOH A 45 389 45 HOH TIP . G 5 HOH A 46 390 46 HOH TIP . G 5 HOH A 47 391 47 HOH TIP . G 5 HOH A 48 392 48 HOH TIP . G 5 HOH A 49 393 49 HOH TIP . G 5 HOH A 50 394 50 HOH TIP . G 5 HOH A 51 395 51 HOH TIP . G 5 HOH A 52 396 52 HOH TIP . G 5 HOH A 53 397 53 HOH TIP . G 5 HOH A 54 398 54 HOH TIP . G 5 HOH A 55 399 55 HOH TIP . G 5 HOH A 56 400 56 HOH TIP . G 5 HOH A 57 401 57 HOH TIP . G 5 HOH A 58 402 58 HOH TIP . G 5 HOH A 59 403 59 HOH TIP . G 5 HOH A 60 404 60 HOH TIP . G 5 HOH A 61 405 61 HOH TIP . G 5 HOH A 62 406 62 HOH TIP . G 5 HOH A 63 407 63 HOH TIP . G 5 HOH A 64 408 64 HOH TIP . G 5 HOH A 65 409 65 HOH TIP . G 5 HOH A 66 410 66 HOH TIP . G 5 HOH A 67 411 67 HOH TIP . G 5 HOH A 68 412 68 HOH TIP . G 5 HOH A 69 413 69 HOH TIP . G 5 HOH A 70 414 70 HOH TIP . G 5 HOH A 71 415 71 HOH TIP . G 5 HOH A 72 416 72 HOH TIP . G 5 HOH A 73 417 73 HOH TIP . G 5 HOH A 74 418 74 HOH TIP . G 5 HOH A 75 419 75 HOH TIP . G 5 HOH A 76 420 76 HOH TIP . G 5 HOH A 77 421 77 HOH TIP . G 5 HOH A 78 422 78 HOH TIP . G 5 HOH A 79 423 79 HOH TIP . G 5 HOH A 80 424 80 HOH TIP . G 5 HOH A 81 425 81 HOH TIP . G 5 HOH A 82 426 82 HOH TIP . G 5 HOH A 83 427 83 HOH TIP . G 5 HOH A 84 428 84 HOH TIP . G 5 HOH A 85 429 85 HOH TIP . G 5 HOH A 86 430 86 HOH TIP . G 5 HOH A 87 431 87 HOH TIP . G 5 HOH A 88 432 88 HOH TIP . G 5 HOH A 89 433 89 HOH TIP . G 5 HOH A 90 434 90 HOH TIP . G 5 HOH A 91 435 91 HOH TIP . G 5 HOH A 92 436 92 HOH TIP . G 5 HOH A 93 437 93 HOH TIP . G 5 HOH A 94 438 94 HOH TIP . G 5 HOH A 95 439 95 HOH TIP . G 5 HOH A 96 440 96 HOH TIP . G 5 HOH A 97 441 97 HOH TIP . G 5 HOH A 98 442 98 HOH TIP . G 5 HOH A 99 443 99 HOH TIP . G 5 HOH A 100 444 100 HOH TIP . G 5 HOH A 101 445 101 HOH TIP . G 5 HOH A 102 446 102 HOH TIP . G 5 HOH A 103 447 103 HOH TIP . G 5 HOH A 104 448 104 HOH TIP . G 5 HOH A 105 449 105 HOH TIP . G 5 HOH A 106 450 106 HOH TIP . G 5 HOH A 107 451 107 HOH TIP . G 5 HOH A 108 452 108 HOH TIP . G 5 HOH A 109 453 109 HOH TIP . G 5 HOH A 110 454 110 HOH TIP . G 5 HOH A 111 455 111 HOH TIP . G 5 HOH A 112 456 112 HOH TIP . G 5 HOH A 113 457 113 HOH TIP . G 5 HOH A 114 458 114 HOH TIP . G 5 HOH A 115 459 115 HOH TIP . G 5 HOH A 116 460 116 HOH TIP . G 5 HOH A 117 461 117 HOH TIP . G 5 HOH A 118 462 118 HOH TIP . G 5 HOH A 119 463 119 HOH TIP . G 5 HOH A 120 464 120 HOH TIP . G 5 HOH A 121 465 121 HOH TIP . G 5 HOH A 122 466 122 HOH TIP . G 5 HOH A 123 467 123 HOH TIP . G 5 HOH A 124 468 124 HOH TIP . G 5 HOH A 125 469 125 HOH TIP . G 5 HOH A 126 470 126 HOH TIP . G 5 HOH A 127 471 127 HOH TIP . G 5 HOH A 128 472 128 HOH TIP . G 5 HOH A 129 473 129 HOH TIP . G 5 HOH A 130 474 130 HOH TIP . G 5 HOH A 131 475 131 HOH TIP . G 5 HOH A 132 476 132 HOH TIP . G 5 HOH A 133 477 133 HOH TIP . G 5 HOH A 134 478 134 HOH TIP . G 5 HOH A 135 479 135 HOH TIP . G 5 HOH A 136 480 136 HOH TIP . G 5 HOH A 137 481 137 HOH TIP . G 5 HOH A 138 482 138 HOH TIP . G 5 HOH A 139 483 139 HOH TIP . G 5 HOH A 140 484 140 HOH TIP . G 5 HOH A 141 485 141 HOH TIP . G 5 HOH A 142 486 142 HOH TIP . G 5 HOH A 143 487 143 HOH TIP . G 5 HOH A 144 488 144 HOH TIP . G 5 HOH A 145 489 145 HOH TIP . G 5 HOH A 146 490 146 HOH TIP . G 5 HOH A 147 491 147 HOH TIP . G 5 HOH A 148 492 148 HOH TIP . G 5 HOH A 149 493 149 HOH TIP . G 5 HOH A 150 494 150 HOH TIP . G 5 HOH A 151 495 151 HOH TIP . G 5 HOH A 152 496 152 HOH TIP . G 5 HOH A 153 497 153 HOH TIP . G 5 HOH A 154 498 154 HOH TIP . G 5 HOH A 155 499 155 HOH TIP . G 5 HOH A 156 500 156 HOH TIP . G 5 HOH A 157 501 157 HOH TIP . G 5 HOH A 158 502 158 HOH TIP . G 5 HOH A 159 503 159 HOH TIP . G 5 HOH A 160 504 160 HOH TIP . G 5 HOH A 161 505 161 HOH TIP . G 5 HOH A 162 506 162 HOH TIP . G 5 HOH A 163 507 163 HOH TIP . G 5 HOH A 164 508 164 HOH TIP . G 5 HOH A 165 509 165 HOH TIP . G 5 HOH A 166 510 166 HOH TIP . G 5 HOH A 167 511 167 HOH TIP . G 5 HOH A 168 512 168 HOH TIP . G 5 HOH A 169 513 169 HOH TIP . G 5 HOH A 170 514 170 HOH TIP . G 5 HOH A 171 515 171 HOH TIP . G 5 HOH A 172 516 172 HOH TIP . G 5 HOH A 173 517 173 HOH TIP . G 5 HOH A 174 518 174 HOH TIP . G 5 HOH A 175 519 175 HOH TIP . G 5 HOH A 176 520 176 HOH TIP . G 5 HOH A 177 521 177 HOH TIP . G 5 HOH A 178 522 178 HOH TIP . G 5 HOH A 179 523 179 HOH TIP . G 5 HOH A 180 524 180 HOH TIP . G 5 HOH A 181 525 181 HOH TIP . G 5 HOH A 182 526 182 HOH TIP . G 5 HOH A 183 527 183 HOH TIP . G 5 HOH A 184 528 184 HOH TIP . G 5 HOH A 185 529 185 HOH TIP . G 5 HOH A 186 530 186 HOH TIP . G 5 HOH A 187 531 187 HOH TIP . G 5 HOH A 188 532 188 HOH TIP . G 5 HOH A 189 533 189 HOH TIP . G 5 HOH A 190 534 190 HOH TIP . G 5 HOH A 191 535 191 HOH TIP . G 5 HOH A 192 536 192 HOH TIP . G 5 HOH A 193 537 193 HOH TIP . G 5 HOH A 194 538 194 HOH TIP . G 5 HOH A 195 539 195 HOH TIP . G 5 HOH A 196 540 196 HOH TIP . G 5 HOH A 197 541 197 HOH TIP . G 5 HOH A 198 542 198 HOH TIP . G 5 HOH A 199 543 199 HOH TIP . G 5 HOH A 200 544 200 HOH TIP . G 5 HOH A 201 545 201 HOH TIP . G 5 HOH A 202 546 202 HOH TIP . G 5 HOH A 203 547 203 HOH TIP . G 5 HOH A 204 548 204 HOH TIP . G 5 HOH A 205 549 205 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 108.377 40.922 88.103 1 32.96 ? C1 GOL 346 A 1 HETATM 2 O O1 GOL . . . C 3 108.902 41.725 87.057 1 33.32 ? O1 GOL 346 A 1 HETATM 3 C C2 GOL . . . C 3 108.729 41.562 89.427 1 32.5 ? C2 GOL 346 A 1 HETATM 4 O O2 GOL . . . C 3 110.142 41.616 89.478 1 35.65 ? O2 GOL 346 A 1 HETATM 5 C C3 GOL . . . C 3 108.362 40.684 90.593 1 27.27 ? C3 GOL 346 A 1 HETATM 6 O O3 GOL . . . C 3 108.387 41.485 91.762 1 24.31 ? O3 GOL 346 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 6 #