data_3KZY # _model_server_result.job_id 7aHFLrsDFAZKgvg9wCybzQ _model_server_result.datetime_utc '2025-03-04 21:29:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kzy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":200}' # _entry.id 3KZY # _exptl.entry_id 3KZY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KZY _cell.length_a 112.535 _cell.length_b 112.535 _cell.length_c 64.823 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KZY _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 8 A CYS 5 1_555 C ZN ZN . A ZN 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc2 A SG CYS 27 A CYS 24 1_555 C ZN ZN . A ZN 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc3 A NE2 HIS 32 A HIS 29 1_555 C ZN ZN . A ZN 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc4 A ND1 HIS 88 A HIS 85 1_555 C ZN ZN . A ZN 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc5 B SG CYS 8 B CYS 5 1_555 D ZN ZN . B ZN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc6 B SG CYS 27 B CYS 24 1_555 D ZN ZN . B ZN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc7 B NE2 HIS 32 B HIS 29 1_555 D ZN ZN . B ZN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc8 B ND1 HIS 88 B HIS 85 1_555 D ZN ZN . B ZN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3KZY _atom_sites.fract_transf_matrix[1][1] 0.008886 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008886 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015427 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 180 180 ZN ZN . D 2 ZN B 1 200 200 ZN ZN . E 3 HOH A 1 181 1 HOH HOH . E 3 HOH A 2 182 2 HOH HOH . E 3 HOH A 3 183 183 HOH HOH . E 3 HOH A 4 184 184 HOH HOH . E 3 HOH A 5 185 185 HOH HOH . E 3 HOH A 6 186 6 HOH HOH . E 3 HOH A 7 187 187 HOH HOH . E 3 HOH A 8 188 188 HOH HOH . E 3 HOH A 9 189 7 HOH HOH . E 3 HOH A 10 190 190 HOH HOH . E 3 HOH A 11 191 10 HOH HOH . E 3 HOH A 12 192 11 HOH HOH . E 3 HOH A 13 193 193 HOH HOH . E 3 HOH A 14 194 194 HOH HOH . E 3 HOH A 15 195 195 HOH HOH . E 3 HOH A 16 196 196 HOH HOH . E 3 HOH A 17 197 13 HOH HOH . E 3 HOH A 18 198 198 HOH HOH . E 3 HOH A 19 199 199 HOH HOH . E 3 HOH A 20 200 17 HOH HOH . E 3 HOH A 21 201 201 HOH HOH . E 3 HOH A 22 202 202 HOH HOH . E 3 HOH A 23 203 203 HOH HOH . E 3 HOH A 24 204 19 HOH HOH . E 3 HOH A 25 205 205 HOH HOH . E 3 HOH A 26 206 206 HOH HOH . E 3 HOH A 27 207 22 HOH HOH . E 3 HOH A 28 208 208 HOH HOH . E 3 HOH A 29 209 209 HOH HOH . E 3 HOH A 30 210 210 HOH HOH . E 3 HOH A 31 211 26 HOH HOH . E 3 HOH A 32 212 212 HOH HOH . E 3 HOH A 33 213 27 HOH HOH . E 3 HOH A 34 214 214 HOH HOH . E 3 HOH A 35 215 28 HOH HOH . E 3 HOH A 36 216 31 HOH HOH . E 3 HOH A 37 217 217 HOH HOH . E 3 HOH A 38 218 218 HOH HOH . E 3 HOH A 39 219 219 HOH HOH . E 3 HOH A 40 220 220 HOH HOH . E 3 HOH A 41 221 221 HOH HOH . E 3 HOH A 42 222 222 HOH HOH . E 3 HOH A 43 223 223 HOH HOH . E 3 HOH A 44 224 224 HOH HOH . E 3 HOH A 45 225 225 HOH HOH . E 3 HOH A 46 226 35 HOH HOH . E 3 HOH A 47 227 36 HOH HOH . E 3 HOH A 48 228 37 HOH HOH . E 3 HOH A 49 229 38 HOH HOH . E 3 HOH A 50 230 39 HOH HOH . E 3 HOH A 51 231 231 HOH HOH . E 3 HOH A 52 232 232 HOH HOH . E 3 HOH A 53 233 233 HOH HOH . E 3 HOH A 54 234 234 HOH HOH . E 3 HOH A 55 235 235 HOH HOH . E 3 HOH A 56 236 42 HOH HOH . E 3 HOH A 57 237 44 HOH HOH . E 3 HOH A 58 238 238 HOH HOH . E 3 HOH A 59 239 45 HOH HOH . E 3 HOH A 60 240 47 HOH HOH . E 3 HOH A 61 241 51 HOH HOH . E 3 HOH A 62 242 242 HOH HOH . E 3 HOH A 63 243 52 HOH HOH . E 3 HOH A 64 244 244 HOH HOH . E 3 HOH A 65 245 53 HOH HOH . E 3 HOH A 66 246 246 HOH HOH . E 3 HOH A 67 247 54 HOH HOH . E 3 HOH A 68 248 55 HOH HOH . E 3 HOH A 69 249 249 HOH HOH . E 3 HOH A 70 250 250 HOH HOH . E 3 HOH A 71 251 251 HOH HOH . E 3 HOH A 72 252 60 HOH HOH . E 3 HOH A 73 253 61 HOH HOH . E 3 HOH A 74 254 62 HOH HOH . E 3 HOH A 75 255 64 HOH HOH . E 3 HOH A 76 256 65 HOH HOH . E 3 HOH A 77 257 66 HOH HOH . E 3 HOH A 78 258 68 HOH HOH . E 3 HOH A 79 259 73 HOH HOH . E 3 HOH A 80 260 81 HOH HOH . E 3 HOH A 81 261 82 HOH HOH . E 3 HOH A 82 262 85 HOH HOH . E 3 HOH A 83 263 87 HOH HOH . E 3 HOH A 84 264 89 HOH HOH . E 3 HOH A 85 265 91 HOH HOH . E 3 HOH A 86 266 92 HOH HOH . E 3 HOH A 87 267 93 HOH HOH . E 3 HOH A 88 268 94 HOH HOH . E 3 HOH A 89 269 97 HOH HOH . E 3 HOH A 90 270 98 HOH HOH . E 3 HOH A 91 271 99 HOH HOH . E 3 HOH A 92 272 100 HOH HOH . E 3 HOH A 93 273 101 HOH HOH . E 3 HOH A 94 274 103 HOH HOH . E 3 HOH A 95 275 105 HOH HOH . E 3 HOH A 96 276 106 HOH HOH . E 3 HOH A 97 277 107 HOH HOH . E 3 HOH A 98 278 108 HOH HOH . E 3 HOH A 99 279 109 HOH HOH . E 3 HOH A 100 280 111 HOH HOH . E 3 HOH A 101 281 112 HOH HOH . E 3 HOH A 102 282 114 HOH HOH . E 3 HOH A 103 283 115 HOH HOH . E 3 HOH A 104 284 116 HOH HOH . E 3 HOH A 105 285 119 HOH HOH . E 3 HOH A 106 286 123 HOH HOH . E 3 HOH A 107 287 124 HOH HOH . E 3 HOH A 108 288 126 HOH HOH . E 3 HOH A 109 289 127 HOH HOH . E 3 HOH A 110 290 128 HOH HOH . E 3 HOH A 111 291 130 HOH HOH . E 3 HOH A 112 292 132 HOH HOH . E 3 HOH A 113 293 138 HOH HOH . E 3 HOH A 114 294 140 HOH HOH . E 3 HOH A 115 295 141 HOH HOH . E 3 HOH A 116 296 143 HOH HOH . E 3 HOH A 117 297 144 HOH HOH . E 3 HOH A 118 298 145 HOH HOH . E 3 HOH A 119 299 149 HOH HOH . E 3 HOH A 120 300 150 HOH HOH . E 3 HOH A 121 301 151 HOH HOH . E 3 HOH A 122 302 153 HOH HOH . E 3 HOH A 123 303 154 HOH HOH . E 3 HOH A 124 304 155 HOH HOH . E 3 HOH A 125 305 156 HOH HOH . E 3 HOH A 126 306 157 HOH HOH . E 3 HOH A 127 307 158 HOH HOH . E 3 HOH A 128 308 159 HOH HOH . E 3 HOH A 129 309 161 HOH HOH . E 3 HOH A 130 310 162 HOH HOH . E 3 HOH A 131 311 164 HOH HOH . E 3 HOH A 132 312 165 HOH HOH . E 3 HOH A 133 313 166 HOH HOH . E 3 HOH A 134 314 168 HOH HOH . E 3 HOH A 135 315 171 HOH HOH . E 3 HOH A 136 316 174 HOH HOH . E 3 HOH A 137 317 175 HOH HOH . E 3 HOH A 138 318 176 HOH HOH . E 3 HOH A 139 319 177 HOH HOH . E 3 HOH A 140 320 178 HOH HOH . E 3 HOH A 141 321 179 HOH HOH . F 3 HOH B 1 180 180 HOH HOH . F 3 HOH B 2 181 181 HOH HOH . F 3 HOH B 3 182 182 HOH HOH . F 3 HOH B 4 183 3 HOH HOH . F 3 HOH B 5 184 4 HOH HOH . F 3 HOH B 6 185 5 HOH HOH . F 3 HOH B 7 186 186 HOH HOH . F 3 HOH B 8 187 8 HOH HOH . F 3 HOH B 9 188 9 HOH HOH . F 3 HOH B 10 189 189 HOH HOH . F 3 HOH B 11 190 12 HOH HOH . F 3 HOH B 12 191 191 HOH HOH . F 3 HOH B 13 192 192 HOH HOH . F 3 HOH B 14 193 14 HOH HOH . F 3 HOH B 15 194 15 HOH HOH . F 3 HOH B 16 195 16 HOH HOH . F 3 HOH B 17 196 18 HOH HOH . F 3 HOH B 18 197 197 HOH HOH . F 3 HOH B 19 198 20 HOH HOH . F 3 HOH B 20 199 21 HOH HOH . F 3 HOH B 21 201 23 HOH HOH . F 3 HOH B 22 202 24 HOH HOH . F 3 HOH B 23 203 25 HOH HOH . F 3 HOH B 24 204 204 HOH HOH . F 3 HOH B 25 205 29 HOH HOH . F 3 HOH B 26 206 30 HOH HOH . F 3 HOH B 27 207 207 HOH HOH . F 3 HOH B 28 208 32 HOH HOH . F 3 HOH B 29 209 33 HOH HOH . F 3 HOH B 30 210 34 HOH HOH . F 3 HOH B 31 211 211 HOH HOH . F 3 HOH B 32 212 40 HOH HOH . F 3 HOH B 33 213 213 HOH HOH . F 3 HOH B 34 214 41 HOH HOH . F 3 HOH B 35 215 215 HOH HOH . F 3 HOH B 36 216 216 HOH HOH . F 3 HOH B 37 217 43 HOH HOH . F 3 HOH B 38 218 46 HOH HOH . F 3 HOH B 39 219 48 HOH HOH . F 3 HOH B 40 220 49 HOH HOH . F 3 HOH B 41 221 50 HOH HOH . F 3 HOH B 42 222 56 HOH HOH . F 3 HOH B 43 223 57 HOH HOH . F 3 HOH B 44 224 58 HOH HOH . F 3 HOH B 45 225 59 HOH HOH . F 3 HOH B 46 226 226 HOH HOH . F 3 HOH B 47 227 227 HOH HOH . F 3 HOH B 48 228 228 HOH HOH . F 3 HOH B 49 229 229 HOH HOH . F 3 HOH B 50 230 230 HOH HOH . F 3 HOH B 51 231 63 HOH HOH . F 3 HOH B 52 232 67 HOH HOH . F 3 HOH B 53 233 69 HOH HOH . F 3 HOH B 54 234 70 HOH HOH . F 3 HOH B 55 235 71 HOH HOH . F 3 HOH B 56 236 236 HOH HOH . F 3 HOH B 57 237 237 HOH HOH . F 3 HOH B 58 238 72 HOH HOH . F 3 HOH B 59 239 239 HOH HOH . F 3 HOH B 60 240 240 HOH HOH . F 3 HOH B 61 241 241 HOH HOH . F 3 HOH B 62 242 74 HOH HOH . F 3 HOH B 63 243 243 HOH HOH . F 3 HOH B 64 244 75 HOH HOH . F 3 HOH B 65 245 245 HOH HOH . F 3 HOH B 66 246 76 HOH HOH . F 3 HOH B 67 247 247 HOH HOH . F 3 HOH B 68 248 248 HOH HOH . F 3 HOH B 69 249 77 HOH HOH . F 3 HOH B 70 250 78 HOH HOH . F 3 HOH B 71 251 79 HOH HOH . F 3 HOH B 72 252 80 HOH HOH . F 3 HOH B 73 253 83 HOH HOH . F 3 HOH B 74 254 84 HOH HOH . F 3 HOH B 75 255 86 HOH HOH . F 3 HOH B 76 256 88 HOH HOH . F 3 HOH B 77 257 90 HOH HOH . F 3 HOH B 78 258 95 HOH HOH . F 3 HOH B 79 259 96 HOH HOH . F 3 HOH B 80 260 102 HOH HOH . F 3 HOH B 81 261 104 HOH HOH . F 3 HOH B 82 262 110 HOH HOH . F 3 HOH B 83 263 113 HOH HOH . F 3 HOH B 84 264 117 HOH HOH . F 3 HOH B 85 265 118 HOH HOH . F 3 HOH B 86 266 120 HOH HOH . F 3 HOH B 87 267 121 HOH HOH . F 3 HOH B 88 268 122 HOH HOH . F 3 HOH B 89 269 125 HOH HOH . F 3 HOH B 90 270 129 HOH HOH . F 3 HOH B 91 271 131 HOH HOH . F 3 HOH B 92 272 133 HOH HOH . F 3 HOH B 93 273 134 HOH HOH . F 3 HOH B 94 274 135 HOH HOH . F 3 HOH B 95 275 136 HOH HOH . F 3 HOH B 96 276 137 HOH HOH . F 3 HOH B 97 277 139 HOH HOH . F 3 HOH B 98 278 142 HOH HOH . F 3 HOH B 99 279 146 HOH HOH . F 3 HOH B 100 280 147 HOH HOH . F 3 HOH B 101 281 148 HOH HOH . F 3 HOH B 102 282 152 HOH HOH . F 3 HOH B 103 283 160 HOH HOH . F 3 HOH B 104 284 163 HOH HOH . F 3 HOH B 105 285 167 HOH HOH . F 3 HOH B 106 286 169 HOH HOH . F 3 HOH B 107 287 170 HOH HOH . F 3 HOH B 108 288 172 HOH HOH . F 3 HOH B 109 289 173 HOH HOH . F 3 HOH B 110 290 200 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 31.24 _atom_site.Cartn_y -12.526 _atom_site.Cartn_z 23.186 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.04 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 200 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 685 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #