data_3L01 # _model_server_result.job_id ASV4pIHqn6Dj82EfGU1Elg _model_server_result.datetime_utc '2024-11-25 10:10:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3l01 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":5605}' # _entry.id 3L01 # _exptl.entry_id 3L01 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3L01 _cell.length_a 103.604 _cell.length_b 119.017 _cell.length_c 141.101 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3L01 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,I,J,K,L,U 1 1 B,D,M,N,O,P,Q,R,S,T,V 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 M N N ? 3 N N N ? 3 O N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 GLC GLC C1 O1 . O4 HO4 . sing 2 ? 2 3 2 GLC GLC C1 O1 . O4 HO4 . sing 3 ? 2 4 3 GLC GLC C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C GLC 1 C 1 GLC C 5360 MTT 2 n C GLC 2 C 2 GLC C 5360 MTT 2 n C GLC 3 C 3 GLC C 5360 MTT 2 n C GLC 4 C 4 GLC C 5360 MTT 2 n D GLC 1 D 1 GLC C 5361 MTT 2 n D GLC 2 D 2 GLC C 5361 MTT 2 n D GLC 3 D 3 GLC C 5361 MTT 2 n D GLC 4 D 4 GLC C 5361 MTT # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 223 A CYS 221 1_555 A SG CYS 352 A CYS 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? disulf ? disulf2 B SG CYS 223 B CYS 221 1_555 B SG CYS 352 B CYS 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? covale ? covale1 C O4 GLC . C GLC 1 1_555 C C1 GLC . C GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 sing covale ? covale2 C O4 GLC . C GLC 2 1_555 C C1 GLC . C GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 sing covale ? covale3 C O4 GLC . C GLC 3 1_555 C C1 GLC . C GLC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.419 sing covale ? covale4 D O4 GLC . D GLC 1 1_555 D C1 GLC . D GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.465 sing covale ? covale5 D O4 GLC . D GLC 2 1_555 D C1 GLC . D GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 sing covale ? covale6 D O4 GLC . D GLC 3 1_555 D C1 GLC . D GLC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 sing metalc ? metalc1 A OE2 GLU 341 A GLU 339 1_555 E K K . A K 5600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.036 ? metalc ? metalc2 B OE2 GLU 341 B GLU 339 1_555 M K K . B K 5601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.898 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3L01 _atom_sites.fract_transf_matrix[1][1] 0.009652 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008402 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007087 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 K A 1 5600 5600 K K . F 3 K A 1 5602 5602 K K . G 3 K A 1 5607 5607 K K . H 4 CL A 1 5700 5700 CL CL . I 4 CL A 1 5703 5703 CL CL . J 4 CL A 1 5704 5704 CL CL . K 5 GOL A 1 6500 6500 GOL GOL . L 5 GOL A 1 6502 6502 GOL GOL . M 3 K B 1 5601 5601 K K . N 3 K B 1 5605 5605 K K . O 3 K B 1 5606 5606 K K . P 4 CL B 1 5701 5701 CL CL . Q 4 CL B 1 5702 5702 CL CL . R 4 CL B 1 5705 5705 CL CL . S 5 GOL B 1 6501 6501 GOL GOL . T 5 GOL B 1 6503 6503 GOL GOL . U 6 HOH A 1 427 1 HOH HOH . U 6 HOH A 2 428 2 HOH HOH . U 6 HOH A 3 429 4 HOH HOH . U 6 HOH A 4 430 7 HOH HOH . U 6 HOH A 5 431 8 HOH HOH . U 6 HOH A 6 432 11 HOH HOH . U 6 HOH A 7 433 12 HOH HOH . U 6 HOH A 8 434 15 HOH HOH . U 6 HOH A 9 435 16 HOH HOH . U 6 HOH A 10 436 17 HOH HOH . U 6 HOH A 11 437 18 HOH HOH . U 6 HOH A 12 438 20 HOH HOH . U 6 HOH A 13 439 22 HOH HOH . U 6 HOH A 14 440 24 HOH HOH . U 6 HOH A 15 441 26 HOH HOH . U 6 HOH A 16 442 27 HOH HOH . U 6 HOH A 17 443 28 HOH HOH . U 6 HOH A 18 444 34 HOH HOH . U 6 HOH A 19 445 35 HOH HOH . U 6 HOH A 20 446 38 HOH HOH . U 6 HOH A 21 447 41 HOH HOH . U 6 HOH A 22 448 43 HOH HOH . U 6 HOH A 23 449 48 HOH HOH . U 6 HOH A 24 450 51 HOH HOH . U 6 HOH A 25 451 52 HOH HOH . U 6 HOH A 26 452 53 HOH HOH . U 6 HOH A 27 453 55 HOH HOH . U 6 HOH A 28 454 56 HOH HOH . U 6 HOH A 29 455 60 HOH HOH . U 6 HOH A 30 456 63 HOH HOH . U 6 HOH A 31 457 65 HOH HOH . U 6 HOH A 32 458 67 HOH HOH . U 6 HOH A 33 459 68 HOH HOH . U 6 HOH A 34 460 70 HOH HOH . U 6 HOH A 35 461 71 HOH HOH . U 6 HOH A 36 462 76 HOH HOH . U 6 HOH A 37 463 77 HOH HOH . U 6 HOH A 38 464 79 HOH HOH . U 6 HOH A 39 465 80 HOH HOH . U 6 HOH A 40 466 81 HOH HOH . U 6 HOH A 41 467 83 HOH HOH . U 6 HOH A 42 468 86 HOH HOH . U 6 HOH A 43 469 89 HOH HOH . U 6 HOH A 44 470 90 HOH HOH . U 6 HOH A 45 471 91 HOH HOH . U 6 HOH A 46 472 94 HOH HOH . U 6 HOH A 47 473 95 HOH HOH . U 6 HOH A 48 474 96 HOH HOH . V 6 HOH B 1 427 3 HOH HOH . V 6 HOH B 2 428 5 HOH HOH . V 6 HOH B 3 429 6 HOH HOH . V 6 HOH B 4 430 9 HOH HOH . V 6 HOH B 5 431 10 HOH HOH . V 6 HOH B 6 432 13 HOH HOH . V 6 HOH B 7 433 14 HOH HOH . V 6 HOH B 8 434 19 HOH HOH . V 6 HOH B 9 435 21 HOH HOH . V 6 HOH B 10 436 23 HOH HOH . V 6 HOH B 11 437 25 HOH HOH . V 6 HOH B 12 438 29 HOH HOH . V 6 HOH B 13 439 30 HOH HOH . V 6 HOH B 14 440 31 HOH HOH . V 6 HOH B 15 441 32 HOH HOH . V 6 HOH B 16 442 33 HOH HOH . V 6 HOH B 17 443 36 HOH HOH . V 6 HOH B 18 444 37 HOH HOH . V 6 HOH B 19 445 39 HOH HOH . V 6 HOH B 20 446 40 HOH HOH . V 6 HOH B 21 447 42 HOH HOH . V 6 HOH B 22 448 44 HOH HOH . V 6 HOH B 23 449 45 HOH HOH . V 6 HOH B 24 450 46 HOH HOH . V 6 HOH B 25 451 47 HOH HOH . V 6 HOH B 26 452 49 HOH HOH . V 6 HOH B 27 453 50 HOH HOH . V 6 HOH B 28 454 54 HOH HOH . V 6 HOH B 29 455 57 HOH HOH . V 6 HOH B 30 456 58 HOH HOH . V 6 HOH B 31 457 59 HOH HOH . V 6 HOH B 32 458 61 HOH HOH . V 6 HOH B 33 459 62 HOH HOH . V 6 HOH B 34 460 64 HOH HOH . V 6 HOH B 35 461 66 HOH HOH . V 6 HOH B 36 462 69 HOH HOH . V 6 HOH B 37 463 72 HOH HOH . V 6 HOH B 38 464 73 HOH HOH . V 6 HOH B 39 465 74 HOH HOH . V 6 HOH B 40 466 75 HOH HOH . V 6 HOH B 41 467 78 HOH HOH . V 6 HOH B 42 468 82 HOH HOH . V 6 HOH B 43 469 84 HOH HOH . V 6 HOH B 44 470 85 HOH HOH . V 6 HOH B 45 471 87 HOH HOH . V 6 HOH B 46 472 88 HOH HOH . V 6 HOH B 47 473 92 HOH HOH . V 6 HOH B 48 474 93 HOH HOH . V 6 HOH B 49 475 97 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 3 _atom_site.Cartn_x 27.933 _atom_site.Cartn_y 5.272 _atom_site.Cartn_z 46.811 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 5605 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #