data_3L02 # _model_server_result.job_id oGx78T1RkHbyJEEEQFwBRQ _model_server_result.datetime_utc '2024-12-26 15:48:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3l02 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":346}' # _entry.id 3L02 # _exptl.entry_id 3L02 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 141.02 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHORIC ACID MONO(FORMAMIDE)ESTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3L02 _cell.length_a 129.421 _cell.length_b 129.421 _cell.length_c 129.421 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3L02 _symmetry.cell_setting ? _symmetry.Int_Tables_number 199 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_665 -z+3/2,-x+1,y+1/2 0 0 -1 -1 0 0 0 1 0 194.1315 129.421 64.7105 3 'crystal symmetry operation' 10_646 -y+1,z-1/2,-x+3/2 0 -1 0 0 0 1 -1 0 0 129.421 -64.7105 194.1315 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id C _struct_conn.ptnr1_label_comp_id KCX _struct_conn.ptnr1_label_seq_id 322 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id KCX _struct_conn.ptnr1_auth_seq_id 302 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id ALA _struct_conn.ptnr2_label_seq_id 323 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id ALA _struct_conn.ptnr2_auth_seq_id 303 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.327 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C H4 N O5 P' _chem_comp.formula_weight 141.02 _chem_comp.id CP _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHORIC ACID MONO(FORMAMIDE)ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C CP sing 70 n n N HN1 CP sing 71 n n N HN2 CP sing 72 n n C O CP doub 73 n n C O4P CP sing 74 n n O4P P CP sing 75 n n P O1P CP doub 76 n n P O2P CP sing 77 n n P O3P CP sing 78 n n O2P HOP2 CP sing 79 n n O3P HOP3 CP sing 80 n n # _atom_sites.entry_id 3L02 _atom_sites.fract_transf_matrix[1][1] 0.007727 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007727 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007727 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SN0 A 1 345 345 SN0 SN0 . C 3 CP A 1 346 346 CP CP . D 4 SO4 A 1 349 349 SO4 SO4 . E 4 SO4 A 1 350 350 SO4 SO4 . F 5 HOH A 1 340 1 HOH TIP . F 5 HOH A 2 341 2 HOH TIP . F 5 HOH A 3 342 3 HOH TIP . F 5 HOH A 4 343 4 HOH TIP . F 5 HOH A 5 344 5 HOH TIP . F 5 HOH A 6 347 6 HOH TIP . F 5 HOH A 7 348 7 HOH TIP . F 5 HOH A 8 351 8 HOH TIP . F 5 HOH A 9 352 9 HOH TIP . F 5 HOH A 10 353 10 HOH TIP . F 5 HOH A 11 354 11 HOH TIP . F 5 HOH A 12 355 12 HOH TIP . F 5 HOH A 13 356 13 HOH TIP . F 5 HOH A 14 357 14 HOH TIP . F 5 HOH A 15 358 15 HOH TIP . F 5 HOH A 16 359 16 HOH TIP . F 5 HOH A 17 360 17 HOH TIP . F 5 HOH A 18 361 18 HOH TIP . F 5 HOH A 19 362 19 HOH TIP . F 5 HOH A 20 363 20 HOH TIP . F 5 HOH A 21 364 21 HOH TIP . F 5 HOH A 22 365 22 HOH TIP . F 5 HOH A 23 366 23 HOH TIP . F 5 HOH A 24 367 24 HOH TIP . F 5 HOH A 25 368 25 HOH TIP . F 5 HOH A 26 369 26 HOH TIP . F 5 HOH A 27 370 27 HOH TIP . F 5 HOH A 28 371 28 HOH TIP . F 5 HOH A 29 372 29 HOH TIP . F 5 HOH A 30 373 30 HOH TIP . F 5 HOH A 31 374 31 HOH TIP . F 5 HOH A 32 375 32 HOH TIP . F 5 HOH A 33 376 33 HOH TIP . F 5 HOH A 34 377 34 HOH TIP . F 5 HOH A 35 378 35 HOH TIP . F 5 HOH A 36 379 36 HOH TIP . F 5 HOH A 37 380 37 HOH TIP . F 5 HOH A 38 381 38 HOH TIP . F 5 HOH A 39 382 39 HOH TIP . F 5 HOH A 40 383 40 HOH TIP . F 5 HOH A 41 384 41 HOH TIP . F 5 HOH A 42 385 42 HOH TIP . F 5 HOH A 43 386 43 HOH TIP . F 5 HOH A 44 387 44 HOH TIP . F 5 HOH A 45 388 45 HOH TIP . F 5 HOH A 46 389 46 HOH TIP . F 5 HOH A 47 390 47 HOH TIP . F 5 HOH A 48 391 48 HOH TIP . F 5 HOH A 49 392 49 HOH TIP . F 5 HOH A 50 393 50 HOH TIP . F 5 HOH A 51 394 51 HOH TIP . F 5 HOH A 52 395 52 HOH TIP . F 5 HOH A 53 396 53 HOH TIP . F 5 HOH A 54 397 54 HOH TIP . F 5 HOH A 55 398 55 HOH TIP . F 5 HOH A 56 399 56 HOH TIP . F 5 HOH A 57 400 57 HOH TIP . F 5 HOH A 58 401 58 HOH TIP . F 5 HOH A 59 402 59 HOH TIP . F 5 HOH A 60 403 60 HOH TIP . F 5 HOH A 61 404 61 HOH TIP . F 5 HOH A 62 405 62 HOH TIP . F 5 HOH A 63 406 63 HOH TIP . F 5 HOH A 64 407 64 HOH TIP . F 5 HOH A 65 408 65 HOH TIP . F 5 HOH A 66 409 66 HOH TIP . F 5 HOH A 67 410 67 HOH TIP . F 5 HOH A 68 411 68 HOH TIP . F 5 HOH A 69 412 69 HOH TIP . F 5 HOH A 70 413 70 HOH TIP . F 5 HOH A 71 414 71 HOH TIP . F 5 HOH A 72 415 72 HOH TIP . F 5 HOH A 73 416 73 HOH TIP . F 5 HOH A 74 417 74 HOH TIP . F 5 HOH A 75 418 75 HOH TIP . F 5 HOH A 76 419 76 HOH TIP . F 5 HOH A 77 420 77 HOH TIP . F 5 HOH A 78 421 78 HOH TIP . F 5 HOH A 79 422 79 HOH TIP . F 5 HOH A 80 423 80 HOH TIP . F 5 HOH A 81 424 81 HOH TIP . F 5 HOH A 82 425 82 HOH TIP . F 5 HOH A 83 426 83 HOH TIP . F 5 HOH A 84 427 84 HOH TIP . F 5 HOH A 85 428 85 HOH TIP . F 5 HOH A 86 429 86 HOH TIP . F 5 HOH A 87 430 87 HOH TIP . F 5 HOH A 88 431 88 HOH TIP . F 5 HOH A 89 432 89 HOH TIP . F 5 HOH A 90 433 90 HOH TIP . F 5 HOH A 91 434 91 HOH TIP . F 5 HOH A 92 435 92 HOH TIP . F 5 HOH A 93 436 93 HOH TIP . F 5 HOH A 94 437 94 HOH TIP . F 5 HOH A 95 438 95 HOH TIP . F 5 HOH A 96 439 96 HOH TIP . F 5 HOH A 97 440 97 HOH TIP . F 5 HOH A 98 441 98 HOH TIP . F 5 HOH A 99 442 99 HOH TIP . F 5 HOH A 100 443 100 HOH TIP . F 5 HOH A 101 444 101 HOH TIP . F 5 HOH A 102 445 102 HOH TIP . F 5 HOH A 103 446 103 HOH TIP . F 5 HOH A 104 447 104 HOH TIP . F 5 HOH A 105 448 105 HOH TIP . F 5 HOH A 106 449 106 HOH TIP . F 5 HOH A 107 450 107 HOH TIP . F 5 HOH A 108 451 108 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N CP . . . C 3 106.96 46.336 87.322 1 27.73 ? N CP 346 A 1 HETATM 2 C C CP . . . C 3 106.305 45.186 87.447 1 23.85 ? C CP 346 A 1 HETATM 3 O O CP . . . C 3 105.251 44.959 86.866 1 26.59 ? O CP 346 A 1 HETATM 4 O O4P CP . . . C 3 106.921 44.247 88.305 1 28.15 ? O4P CP 346 A 1 HETATM 5 P P CP . . . C 3 106.39 42.703 88.317 1 24.94 ? P CP 346 A 1 HETATM 6 O O1P CP . . . C 3 106.885 41.912 87.053 1 26.94 ? O1P CP 346 A 1 HETATM 7 O O2P CP . . . C 3 104.786 42.745 88.439 1 27.74 ? O2P CP 346 A 1 HETATM 8 O O3P CP . . . C 3 107.103 42.024 89.594 1 28.84 ? O3P CP 346 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #