data_3L13
#
_model_server_result.job_id            BgUT-HaIOfFDNmyRYPibCQ 
_model_server_result.datetime_utc      '2024-11-23 08:36:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3l13 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1}' 
#
_entry.id    3L13 
#
_exptl.entry_id    3L13 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              503.637 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[3-(6-{[4-(methylsulfonyl)piperazin-1-yl]methyl}-4-morpholin-4-ylthieno[3,2-d]pyrimidin-2-yl)phenyl]methanol' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.63 
_cell.angle_gamma         90 
_cell.entry_id            3L13 
_cell.length_a            144.359 
_cell.length_b            67.741 
_cell.length_c            107.151 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3L13 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C23 H29 N5 O4 S2' 
_chem_comp.formula_weight    503.637 
_chem_comp.id                JZW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[3-(6-{[4-(methylsulfonyl)piperazin-1-yl]methyl}-4-morpholin-4-ylthieno[3,2-d]pyrimidin-2-yl)phenyl]methanol' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 JZW doub 171 n y 
C1 C3 JZW sing 172 n y 
N1 C3 JZW doub 173 n y 
N1 C5 JZW sing 174 n y 
O1 C9 JZW sing 175 n n 
O1 C10 JZW sing 176 n n 
S1 C2 JZW sing 177 n y 
S1 C4 JZW sing 178 n y 
C2 C12 JZW sing 179 n n 
N2 C5 JZW doub 180 n y 
N2 C6 JZW sing 181 n y 
O2 S2 JZW doub 182 n n 
S2 O3 JZW doub 183 n n 
S2 N5 JZW sing 184 n n 
S2 C17 JZW sing 185 n n 
C3 C4 JZW sing 186 n y 
N3 C6 JZW sing 187 n n 
N3 C8 JZW sing 188 n n 
N3 C11 JZW sing 189 n n 
C4 C6 JZW doub 190 n y 
N4 C12 JZW sing 191 n n 
N4 C13 JZW sing 192 n n 
N4 C16 JZW sing 193 n n 
O4 C23 JZW sing 194 n n 
C5 C7 JZW sing 195 n y 
N5 C14 JZW sing 196 n n 
N5 C15 JZW sing 197 n n 
C7 C18 JZW doub 198 n y 
C7 C22 JZW sing 199 n y 
C8 C9 JZW sing 200 n n 
C10 C11 JZW sing 201 n n 
C13 C14 JZW sing 202 n n 
C15 C16 JZW sing 203 n n 
C18 C19 JZW sing 204 n y 
C19 C20 JZW doub 205 n y 
C20 C21 JZW sing 206 n y 
C21 C22 JZW doub 207 n y 
C21 C23 JZW sing 208 n n 
C1 H1 JZW sing 209 n n 
O4 HO4 JZW sing 210 n n 
C8 H8 JZW sing 211 n n 
C8 H8A JZW sing 212 n n 
C9 H9 JZW sing 213 n n 
C9 H9A JZW sing 214 n n 
C10 H10 JZW sing 215 n n 
C10 H10A JZW sing 216 n n 
C11 H11 JZW sing 217 n n 
C11 H11A JZW sing 218 n n 
C12 H12 JZW sing 219 n n 
C12 H12A JZW sing 220 n n 
C13 H13 JZW sing 221 n n 
C13 H13A JZW sing 222 n n 
C14 H14 JZW sing 223 n n 
C14 H14A JZW sing 224 n n 
C15 H15 JZW sing 225 n n 
C15 H15A JZW sing 226 n n 
C16 H16 JZW sing 227 n n 
C16 H16A JZW sing 228 n n 
C17 H17 JZW sing 229 n n 
C17 H17A JZW sing 230 n n 
C17 H17B JZW sing 231 n n 
C18 H18 JZW sing 232 n n 
C19 H19 JZW sing 233 n n 
C20 H20 JZW sing 234 n n 
C22 H22 JZW sing 235 n n 
C23 H23 JZW sing 236 n n 
C23 H23A JZW sing 237 n n 
#
_atom_sites.entry_id                     3L13 
_atom_sites.fract_transf_matrix[1][1]    0.006927 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000683 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014762 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009378 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           JZW 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      1 
_pdbx_nonpoly_scheme.auth_seq_num     1 
_pdbx_nonpoly_scheme.pdb_mon_id       JZW 
_pdbx_nonpoly_scheme.auth_mon_id      JZW 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 JZW . . . B 2 22.758 64.939 20.994 1 80.98 ? C1 JZW 1 A 1 
HETATM 2 N N1 JZW . . . B 2 24.227 63.136 21.02 1 84.59 ? N1 JZW 1 A 1 
HETATM 3 O O1 JZW . . . B 2 19.415 59.732 24.477 1 80.33 ? O1 JZW 1 A 1 
HETATM 4 S S1 JZW . . . B 2 20.681 63.949 22.001 1 81.49 ? S1 JZW 1 A 1 
HETATM 5 C C2 JZW . . . B 2 21.504 65.23 21.321 1 81.34 ? C2 JZW 1 A 1 
HETATM 6 N N2 JZW . . . B 2 23.303 61.068 21.959 1 80.76 ? N2 JZW 1 A 1 
HETATM 7 O O2 JZW . . . B 2 18.457 66.896 15.548 1 86.41 ? O2 JZW 1 A 1 
HETATM 8 S S2 JZW . . . B 2 17.851 67.728 16.559 1 88.65 ? S2 JZW 1 A 1 
HETATM 9 C C3 JZW . . . B 2 23.037 63.67 21.272 1 83.54 ? C3 JZW 1 A 1 
HETATM 10 N N3 JZW . . . B 2 21.196 60.926 22.758 1 83.36 ? N3 JZW 1 A 1 
HETATM 11 O O3 JZW . . . B 2 16.518 67.233 16.8 1 85.39 ? O3 JZW 1 A 1 
HETATM 12 C C4 JZW . . . B 2 22.036 62.985 21.83 1 83.8 ? C4 JZW 1 A 1 
HETATM 13 N N4 JZW . . . B 2 20.078 66.929 20.039 1 85.18 ? N4 JZW 1 A 1 
HETATM 14 O O4 JZW . . . B 2 27.765 58.415 23.981 1 77.39 ? O4 JZW 1 A 1 
HETATM 15 C C5 JZW . . . B 2 24.417 61.748 21.356 1 80.17 ? C5 JZW 1 A 1 
HETATM 16 N N5 JZW . . . B 2 18.665 67.569 17.849 1 85.79 ? N5 JZW 1 A 1 
HETATM 17 C C6 JZW . . . B 2 22.145 61.677 22.179 1 83.04 ? C6 JZW 1 A 1 
HETATM 18 C C7 JZW . . . B 2 25.694 61.051 21.16 1 78.92 ? C7 JZW 1 A 1 
HETATM 19 C C8 JZW . . . B 2 19.759 60.961 22.481 1 83.84 ? C8 JZW 1 A 1 
HETATM 20 C C9 JZW . . . B 2 19.072 60.951 23.837 1 82.88 ? C9 JZW 1 A 1 
HETATM 21 C C10 JZW . . . B 2 20.797 59.691 24.79 1 80.88 ? C10 JZW 1 A 1 
HETATM 22 C C11 JZW . . . B 2 21.615 59.743 23.516 1 81.67 ? C11 JZW 1 A 1 
HETATM 23 C C12 JZW . . . B 2 20.93 66.619 21.169 1 84.26 ? C12 JZW 1 A 1 
HETATM 24 C C13 JZW . . . B 2 19.785 68.345 19.859 1 85.81 ? C13 JZW 1 A 1 
HETATM 25 C C14 JZW . . . B 2 19.543 68.616 18.373 1 85.47 ? C14 JZW 1 A 1 
HETATM 26 C C15 JZW . . . B 2 19.041 66.201 18.146 1 84.83 ? C15 JZW 1 A 1 
HETATM 27 C C16 JZW . . . B 2 19.005 66.042 19.652 1 85.76 ? C16 JZW 1 A 1 
HETATM 28 C C17 JZW . . . B 2 17.758 69.302 15.998 1 84.91 ? C17 JZW 1 A 1 
HETATM 29 C C18 JZW . . . B 2 26.641 61.514 20.266 1 80.42 ? C18 JZW 1 A 1 
HETATM 30 C C19 JZW . . . B 2 27.839 60.836 20.135 1 80.22 ? C19 JZW 1 A 1 
HETATM 31 C C20 JZW . . . B 2 28.099 59.717 20.909 1 79.54 ? C20 JZW 1 A 1 
HETATM 32 C C21 JZW . . . B 2 27.154 59.267 21.819 1 79.46 ? C21 JZW 1 A 1 
HETATM 33 C C22 JZW . . . B 2 25.954 59.937 21.946 1 79.2 ? C22 JZW 1 A 1 
HETATM 34 C C23 JZW . . . B 2 27.41 58.043 22.663 1 79.42 ? C23 JZW 1 A 1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           34 
#