data_3L2X
#
_model_server_result.job_id            n9DySNBU_tRSzC49-Ug1Aw 
_model_server_result.datetime_utc      '2024-10-20 07:35:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3l2x 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":169}' 
#
_entry.id    3L2X 
#
_exptl.entry_id    3L2X 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              154.251 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-HYDROXYETHYL DISULFIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3L2X 
_cell.length_a            60.113 
_cell.length_b            60.113 
_cell.length_c            96.655 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3L2X 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 115 A CYS 115 1_555 B SD RXR . A RXR 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
covale ? covale2 A SG CYS 119 A CYS 119 1_555 B S10 RXR . A RXR 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
#
_chem_comp.formula           'C4 H10 O2 S2' 
_chem_comp.formula_weight    154.251 
_chem_comp.id                HED 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-HYDROXYETHYL DISULFIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 HED sing 140 n n 
C1 C2 HED sing 141 n n 
C1 H11 HED sing 142 n n 
C1 H12 HED sing 143 n n 
O1 HO1 HED sing 144 n n 
C2 S3 HED sing 145 n n 
C2 H21 HED sing 146 n n 
C2 H22 HED sing 147 n n 
S3 S4 HED sing 148 n n 
S4 C5 HED sing 149 n n 
C5 C6 HED sing 150 n n 
C5 H51 HED sing 151 n n 
C5 H52 HED sing 152 n n 
C6 O6 HED sing 153 n n 
C6 H61 HED sing 154 n n 
C6 H62 HED sing 155 n n 
O6 HO6 HED sing 156 n n 
#
_atom_sites.entry_id                     3L2X 
_atom_sites.fract_transf_matrix[1][1]    0.016635 
_atom_sites.fract_transf_matrix[1][2]    0.009604 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019209 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010346 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 RXR A 1 166 166 RXR RXR . 
C 3 AZI A 1 165 165 AZI AZI . 
D 4 CL A 1 167 167 CL CL . 
E 4 CL A 1 168 168 CL CL . 
F 5 HED A 1 169 169 HED HED . 
G 6 BME A 1 170 170 BME BME . 
H 7 HOH A 1 171 171 HOH HOH . 
H 7 HOH A 2 172 172 HOH HOH . 
H 7 HOH A 3 173 173 HOH HOH . 
H 7 HOH A 4 174 174 HOH HOH . 
H 7 HOH A 5 175 175 HOH HOH . 
H 7 HOH A 6 176 176 HOH HOH . 
H 7 HOH A 7 177 177 HOH HOH . 
H 7 HOH A 8 178 178 HOH HOH . 
H 7 HOH A 9 179 179 HOH HOH . 
H 7 HOH A 10 180 180 HOH HOH . 
H 7 HOH A 11 181 181 HOH HOH . 
H 7 HOH A 12 182 182 HOH HOH . 
H 7 HOH A 13 183 183 HOH HOH . 
H 7 HOH A 14 184 184 HOH HOH . 
H 7 HOH A 15 185 185 HOH HOH . 
H 7 HOH A 16 186 186 HOH HOH . 
H 7 HOH A 17 187 187 HOH HOH . 
H 7 HOH A 18 188 188 HOH HOH . 
H 7 HOH A 19 189 189 HOH HOH . 
H 7 HOH A 20 190 190 HOH HOH . 
H 7 HOH A 21 191 191 HOH HOH . 
H 7 HOH A 22 192 192 HOH HOH . 
H 7 HOH A 23 193 193 HOH HOH . 
H 7 HOH A 24 194 194 HOH HOH . 
H 7 HOH A 25 195 195 HOH HOH . 
H 7 HOH A 26 196 196 HOH HOH . 
H 7 HOH A 27 197 197 HOH HOH . 
H 7 HOH A 28 198 198 HOH HOH . 
H 7 HOH A 29 199 199 HOH HOH . 
H 7 HOH A 30 200 200 HOH HOH . 
H 7 HOH A 31 201 201 HOH HOH . 
H 7 HOH A 32 202 202 HOH HOH . 
H 7 HOH A 33 203 203 HOH HOH . 
H 7 HOH A 34 204 204 HOH HOH . 
H 7 HOH A 35 205 205 HOH HOH . 
H 7 HOH A 36 206 206 HOH HOH . 
H 7 HOH A 37 207 207 HOH HOH . 
H 7 HOH A 38 208 208 HOH HOH . 
H 7 HOH A 39 209 209 HOH HOH . 
H 7 HOH A 40 210 210 HOH HOH . 
H 7 HOH A 41 211 211 HOH HOH . 
H 7 HOH A 42 212 212 HOH HOH . 
H 7 HOH A 43 213 213 HOH HOH . 
H 7 HOH A 44 214 214 HOH HOH . 
H 7 HOH A 45 215 215 HOH HOH . 
H 7 HOH A 46 216 216 HOH HOH . 
H 7 HOH A 47 217 217 HOH HOH . 
H 7 HOH A 48 218 218 HOH HOH . 
H 7 HOH A 49 219 219 HOH HOH . 
H 7 HOH A 50 220 220 HOH HOH . 
H 7 HOH A 51 221 221 HOH HOH . 
H 7 HOH A 52 222 222 HOH HOH . 
H 7 HOH A 53 223 223 HOH HOH . 
H 7 HOH A 54 224 224 HOH HOH . 
H 7 HOH A 55 225 225 HOH HOH . 
H 7 HOH A 56 226 226 HOH HOH . 
H 7 HOH A 57 227 227 HOH HOH . 
H 7 HOH A 58 228 228 HOH HOH . 
H 7 HOH A 59 229 229 HOH HOH . 
H 7 HOH A 60 230 230 HOH HOH . 
H 7 HOH A 61 231 231 HOH HOH . 
H 7 HOH A 62 232 232 HOH HOH . 
H 7 HOH A 63 233 233 HOH HOH . 
H 7 HOH A 64 234 234 HOH HOH . 
H 7 HOH A 65 235 235 HOH HOH . 
H 7 HOH A 66 236 236 HOH HOH . 
H 7 HOH A 67 237 237 HOH HOH . 
H 7 HOH A 68 238 238 HOH HOH . 
H 7 HOH A 69 239 239 HOH HOH . 
H 7 HOH A 70 240 240 HOH HOH . 
H 7 HOH A 71 241 241 HOH HOH . 
H 7 HOH A 72 242 242 HOH HOH . 
H 7 HOH A 73 243 243 HOH HOH . 
H 7 HOH A 74 244 244 HOH HOH . 
H 7 HOH A 75 245 245 HOH HOH . 
H 7 HOH A 76 246 246 HOH HOH . 
H 7 HOH A 77 247 247 HOH HOH . 
H 7 HOH A 78 248 248 HOH HOH . 
H 7 HOH A 79 249 249 HOH HOH . 
H 7 HOH A 80 250 250 HOH HOH . 
H 7 HOH A 81 251 251 HOH HOH . 
H 7 HOH A 82 252 252 HOH HOH . 
H 7 HOH A 83 253 253 HOH HOH . 
H 7 HOH A 84 254 254 HOH HOH . 
H 7 HOH A 85 255 255 HOH HOH . 
H 7 HOH A 86 256 256 HOH HOH . 
H 7 HOH A 87 257 257 HOH HOH . 
H 7 HOH A 88 258 258 HOH HOH . 
H 7 HOH A 89 259 259 HOH HOH . 
H 7 HOH A 90 260 260 HOH HOH . 
H 7 HOH A 91 261 261 HOH HOH . 
H 7 HOH A 92 262 262 HOH HOH . 
H 7 HOH A 93 263 263 HOH HOH . 
H 7 HOH A 94 264 264 HOH HOH . 
H 7 HOH A 95 265 265 HOH HOH . 
H 7 HOH A 96 266 266 HOH HOH . 
H 7 HOH A 97 267 267 HOH HOH . 
H 7 HOH A 98 268 268 HOH HOH . 
H 7 HOH A 99 269 269 HOH HOH . 
H 7 HOH A 100 270 270 HOH HOH . 
H 7 HOH A 101 271 271 HOH HOH . 
H 7 HOH A 102 272 272 HOH HOH . 
H 7 HOH A 103 273 273 HOH HOH . 
H 7 HOH A 104 274 274 HOH HOH . 
H 7 HOH A 105 275 275 HOH HOH . 
H 7 HOH A 106 276 276 HOH HOH . 
H 7 HOH A 107 277 277 HOH HOH . 
H 7 HOH A 108 278 278 HOH HOH . 
H 7 HOH A 109 279 279 HOH HOH . 
H 7 HOH A 110 280 280 HOH HOH . 
H 7 HOH A 111 281 281 HOH HOH . 
H 7 HOH A 112 282 282 HOH HOH . 
H 7 HOH A 113 283 283 HOH HOH . 
H 7 HOH A 114 284 284 HOH HOH . 
H 7 HOH A 115 285 285 HOH HOH . 
H 7 HOH A 116 286 286 HOH HOH . 
H 7 HOH A 117 287 287 HOH HOH . 
H 7 HOH A 118 288 288 HOH HOH . 
H 7 HOH A 119 289 289 HOH HOH . 
H 7 HOH A 120 290 290 HOH HOH . 
H 7 HOH A 121 291 291 HOH HOH . 
H 7 HOH A 122 292 292 HOH HOH . 
H 7 HOH A 123 293 293 HOH HOH . 
H 7 HOH A 124 294 294 HOH HOH . 
H 7 HOH A 125 295 295 HOH HOH . 
H 7 HOH A 126 296 296 HOH HOH . 
H 7 HOH A 127 297 297 HOH HOH . 
H 7 HOH A 128 298 298 HOH HOH . 
H 7 HOH A 129 299 299 HOH HOH . 
H 7 HOH A 130 300 300 HOH HOH . 
H 7 HOH A 131 301 301 HOH HOH . 
H 7 HOH A 132 302 302 HOH HOH . 
H 7 HOH A 133 303 303 HOH HOH . 
H 7 HOH A 134 304 304 HOH HOH . 
H 7 HOH A 135 305 305 HOH HOH . 
H 7 HOH A 136 306 306 HOH HOH . 
H 7 HOH A 137 307 307 HOH HOH . 
H 7 HOH A 138 308 308 HOH HOH . 
H 7 HOH A 139 309 309 HOH HOH . 
H 7 HOH A 140 310 310 HOH HOH . 
H 7 HOH A 141 311 311 HOH HOH . 
H 7 HOH A 142 312 312 HOH HOH . 
H 7 HOH A 143 313 313 HOH HOH . 
H 7 HOH A 144 314 314 HOH HOH . 
H 7 HOH A 145 315 315 HOH HOH . 
H 7 HOH A 146 316 316 HOH HOH . 
H 7 HOH A 147 317 317 HOH HOH . 
H 7 HOH A 148 318 318 HOH HOH . 
H 7 HOH A 149 319 319 HOH HOH . 
H 7 HOH A 150 320 320 HOH HOH . 
H 7 HOH A 151 321 321 HOH HOH . 
H 7 HOH A 152 322 322 HOH HOH . 
H 7 HOH A 153 323 323 HOH HOH . 
H 7 HOH A 154 324 324 HOH HOH . 
H 7 HOH A 155 325 325 HOH HOH . 
H 7 HOH A 156 326 326 HOH HOH . 
H 7 HOH A 157 327 327 HOH HOH . 
H 7 HOH A 158 328 328 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 HED . . . F 5 27.98 -18.757 34.948 1 34.6 ? C1 HED 169 A 1 
HETATM 2 O O1 HED . . . F 5 27.937 -17.509 34.297 1 34.96 ? O1 HED 169 A 1 
HETATM 3 C C2 HED . . . F 5 27.83 -19.849 33.897 1 31.71 ? C2 HED 169 A 1 
HETATM 4 S S3 HED . . . F 5 26.094 -20.218 33.54 1 35.64 ? S3 HED 169 A 1 
HETATM 5 S S4 HED . . . F 5 25.145 -20.464 35.326 1 39.23 ? S4 HED 169 A 1 
HETATM 6 C C5 HED . . . F 5 25.22 -22.245 35.652 1 27.95 ? C5 HED 169 A 1 
HETATM 7 C C6 HED . . . F 5 24.727 -23.03 34.443 1 41.3 ? C6 HED 169 A 1 
HETATM 8 O O6 HED . . . F 5 24.548 -24.387 34.784 1 47.4 ? O6 HED 169 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           8 
#