data_3L30 # _model_server_result.job_id RZkNoH4uFSeTbJFrD9y1LQ _model_server_result.datetime_utc '2024-10-14 10:22:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3l30 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":128}' # _entry.id 3L30 # _exptl.entry_id 3L30 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 309.316 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4,14-dihydro-8H-[1,3]dioxolo[4,5-g]isoquino[3,2-a]isoquinoline-9,10-diol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3L30 _cell.length_a 68.88 _cell.length_b 68.88 _cell.length_c 70.16 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3L30 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 11 A CYS 11 1_555 A SG CYS 77 A CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? disulf ? disulf2 A SG CYS 27 A CYS 27 1_555 A SG CYS 124 A CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf3 A SG CYS 29 A CYS 29 1_555 A SG CYS 45 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 A SG CYS 44 A CYS 44 1_555 A SG CYS 105 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? disulf ? disulf5 A SG CYS 51 A CYS 51 1_555 A SG CYS 98 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf6 A SG CYS 61 A CYS 61 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf7 A SG CYS 84 A CYS 84 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc1 A O TYR 28 A TYR 28 1_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc2 A O GLY 30 A GLY 30 1_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc3 A O GLY 32 A GLY 32 1_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc4 A OD2 ASP 49 A ASP 49 1_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc5 A OD1 ASP 49 A ASP 49 1_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc6 B CA CA . A CA 125 1_555 F O HOH . A HOH 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc7 B CA CA . A CA 125 1_555 F O HOH . A HOH 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? # _chem_comp.formula 'C18 H15 N O4' _chem_comp.formula_weight 309.316 _chem_comp.id DBW _chem_comp.mon_nstd_flag . _chem_comp.name 4,14-dihydro-8H-[1,3]dioxolo[4,5-g]isoquino[3,2-a]isoquinoline-9,10-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DBW sing 83 n n C1 N3 DBW sing 84 n n C1 C4 DBW doub 85 n n C2 C5 DBW doub 86 n n C2 C6 DBW sing 87 n n N3 C7 DBW sing 88 n n N3 C8 DBW sing 89 n n C4 C9 DBW sing 90 n n C5 C10 DBW sing 91 n n C5 C11 DBW sing 92 n n C6 C12 DBW sing 93 n n C7 C13 DBW sing 94 n n C8 C11 DBW doub 95 n n C9 C13 DBW doub 96 n y C9 C14 DBW sing 97 n y C10 C15 DBW sing 98 n n C12 C15 DBW doub 99 n n C12 O16 DBW sing 100 n n C13 C17 DBW sing 101 n y C14 C18 DBW doub 102 n y C15 O19 DBW sing 103 n n O16 C20 DBW sing 104 n n C17 C21 DBW doub 105 n y C17 O22 DBW sing 106 n n C18 C21 DBW sing 107 n y O19 C20 DBW sing 108 n n C21 O23 DBW sing 109 n n C4 H4 DBW sing 110 n n C6 H6 DBW sing 111 n n C7 H7 DBW sing 112 n n C8 H8 DBW sing 113 n n C10 H10 DBW sing 114 n n C11 H11 DBW sing 115 n n C14 H14 DBW sing 116 n n C18 H18 DBW sing 117 n n C20 H20 DBW sing 118 n n C20 H20A DBW sing 119 n n O22 HO22 DBW sing 120 n n O23 HO23 DBW sing 121 n n C10 H10A DBW sing 122 n n C6 H6A DBW sing 123 n n C7 H7A DBW sing 124 n n # _atom_sites.entry_id 3L30 _atom_sites.fract_transf_matrix[1][1] 0.014518 _atom_sites.fract_transf_matrix[1][2] 0.008382 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016764 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014253 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 125 1 CA CA . C 3 CL A 1 126 1 CL CL . D 3 CL A 1 127 1 CL CL . E 4 DBW A 1 128 1 DBW BIC . F 5 HOH A 1 129 1 HOH HOH . F 5 HOH A 2 130 4 HOH HOH . F 5 HOH A 3 131 6 HOH HOH . F 5 HOH A 4 132 7 HOH HOH . F 5 HOH A 5 133 10 HOH HOH . F 5 HOH A 6 134 12 HOH HOH . F 5 HOH A 7 135 13 HOH HOH . F 5 HOH A 8 136 15 HOH HOH . F 5 HOH A 9 137 17 HOH HOH . F 5 HOH A 10 138 2 HOH HOH . F 5 HOH A 11 139 4 HOH HOH . F 5 HOH A 12 140 5 HOH HOH . F 5 HOH A 13 141 7 HOH HOH . F 5 HOH A 14 142 2 HOH HOH . F 5 HOH A 15 143 1 HOH HOH . F 5 HOH A 16 144 3 HOH HOH . F 5 HOH A 17 145 4 HOH HOH . F 5 HOH A 18 146 5 HOH HOH . F 5 HOH A 19 147 6 HOH HOH . F 5 HOH A 20 148 7 HOH HOH . F 5 HOH A 21 149 8 HOH HOH . F 5 HOH A 22 150 11 HOH HOH . F 5 HOH A 23 151 12 HOH HOH . F 5 HOH A 24 152 13 HOH HOH . F 5 HOH A 25 153 14 HOH HOH . F 5 HOH A 26 154 15 HOH HOH . F 5 HOH A 27 155 17 HOH HOH . F 5 HOH A 28 156 18 HOH HOH . F 5 HOH A 29 157 20 HOH HOH . F 5 HOH A 30 158 21 HOH HOH . F 5 HOH A 31 159 22 HOH HOH . F 5 HOH A 32 160 23 HOH HOH . F 5 HOH A 33 161 24 HOH HOH . F 5 HOH A 34 162 25 HOH HOH . F 5 HOH A 35 163 29 HOH HOH . F 5 HOH A 36 164 31 HOH HOH . F 5 HOH A 37 165 33 HOH HOH . F 5 HOH A 38 166 35 HOH HOH . F 5 HOH A 39 167 37 HOH HOH . F 5 HOH A 40 168 43 HOH HOH . F 5 HOH A 41 169 2 HOH HOH . F 5 HOH A 42 170 3 HOH HOH . F 5 HOH A 43 171 6 HOH HOH . F 5 HOH A 44 172 7 HOH HOH . F 5 HOH A 45 173 8 HOH HOH . F 5 HOH A 46 174 10 HOH HOH . F 5 HOH A 47 175 14 HOH HOH . F 5 HOH A 48 176 22 HOH HOH . F 5 HOH A 49 177 23 HOH HOH . F 5 HOH A 50 178 24 HOH HOH . F 5 HOH A 51 179 25 HOH HOH . F 5 HOH A 52 180 33 HOH HOH . F 5 HOH A 53 181 36 HOH HOH . F 5 HOH A 54 182 38 HOH HOH . F 5 HOH A 55 183 1 HOH HOH . F 5 HOH A 56 184 2 HOH HOH . F 5 HOH A 57 185 4 HOH HOH . F 5 HOH A 58 186 4 HOH HOH . F 5 HOH A 59 187 5 HOH HOH . F 5 HOH A 60 188 7 HOH HOH . F 5 HOH A 61 189 8 HOH HOH . F 5 HOH A 62 190 14 HOH HOH . F 5 HOH A 63 191 15 HOH HOH . F 5 HOH A 64 192 18 HOH HOH . F 5 HOH A 65 193 22 HOH HOH . F 5 HOH A 66 194 26 HOH HOH . F 5 HOH A 67 195 27 HOH HOH . F 5 HOH A 68 196 28 HOH HOH . F 5 HOH A 69 197 2 HOH HOH . F 5 HOH A 70 198 4 HOH HOH . F 5 HOH A 71 199 6 HOH HOH . F 5 HOH A 72 200 1 HOH HOH . F 5 HOH A 73 201 1 HOH HOH . F 5 HOH A 74 202 2 HOH HOH . F 5 HOH A 75 203 1 HOH HOH . F 5 HOH A 76 204 2 HOH HOH . F 5 HOH A 77 205 4 HOH HOH . F 5 HOH A 78 206 6 HOH HOH . F 5 HOH A 79 207 1 HOH HOH . F 5 HOH A 80 208 1 HOH HOH . F 5 HOH A 81 209 2 HOH HOH . F 5 HOH A 82 210 3 HOH HOH . F 5 HOH A 83 211 11 HOH HOH . F 5 HOH A 84 212 4 HOH HOH . F 5 HOH A 85 213 1 HOH HOH . F 5 HOH A 86 214 2 HOH HOH . F 5 HOH A 87 215 4 HOH HOH . F 5 HOH A 88 216 5 HOH HOH . F 5 HOH A 89 217 6 HOH HOH . F 5 HOH A 90 218 1 HOH HOH . F 5 HOH A 91 219 1 HOH HOH . F 5 HOH A 92 220 2 HOH HOH . F 5 HOH A 93 221 3 HOH HOH . F 5 HOH A 94 222 4 HOH HOH . F 5 HOH A 95 223 5 HOH HOH . F 5 HOH A 96 224 6 HOH HOH . F 5 HOH A 97 225 7 HOH HOH . F 5 HOH A 98 226 8 HOH HOH . F 5 HOH A 99 227 1 HOH HOH . F 5 HOH A 100 228 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DBW . . . E 4 -37.919 17.676 22.04 0.8 138.81 ? C1 DBW 128 A 1 HETATM 2 C C2 DBW . . . E 4 -38.986 17.428 22.877 0.8 139.32 ? C2 DBW 128 A 1 HETATM 3 N N3 DBW . . . E 4 -36.677 18.085 22.536 0.8 137.93 ? N3 DBW 128 A 1 HETATM 4 C C4 DBW . . . E 4 -38.136 17.506 20.683 0.8 138.76 ? C4 DBW 128 A 1 HETATM 5 C C5 DBW . . . E 4 -38.843 17.59 24.24 0.8 138.83 ? C5 DBW 128 A 1 HETATM 6 C C6 DBW . . . E 4 -40.198 17.01 22.325 0.8 140.23 ? C6 DBW 128 A 1 HETATM 7 C C7 DBW . . . E 4 -35.635 18.323 21.617 0.8 138.2 ? C7 DBW 128 A 1 HETATM 8 C C8 DBW . . . E 4 -36.517 18.25 23.92 0.8 137.78 ? C8 DBW 128 A 1 HETATM 9 C C9 DBW . . . E 4 -37.125 17.734 19.784 0.8 138.35 ? C9 DBW 128 A 1 HETATM 10 C C10 DBW . . . E 4 -39.961 17.314 25.03 0.8 139.71 ? C10 DBW 128 A 1 HETATM 11 C C11 DBW . . . E 4 -37.606 18.002 24.763 0.8 138.21 ? C11 DBW 128 A 1 HETATM 12 C C12 DBW . . . E 4 -41.311 16.744 23.107 0.8 140.62 ? C12 DBW 128 A 1 HETATM 13 C C13 DBW . . . E 4 -35.866 18.144 20.239 0.8 138.4 ? C13 DBW 128 A 1 HETATM 14 C C14 DBW . . . E 4 -37.405 17.537 18.437 0.8 137.89 ? C14 DBW 128 A 1 HETATM 15 C C15 DBW . . . E 4 -41.187 16.901 24.477 0.8 140.44 ? C15 DBW 128 A 1 HETATM 16 O O16 DBW . . . E 4 -42.584 16.342 22.797 0.8 141.07 ? O16 DBW 128 A 1 HETATM 17 C C17 DBW . . . E 4 -34.877 18.36 19.272 0.8 138.29 ? C17 DBW 128 A 1 HETATM 18 C C18 DBW . . . E 4 -36.434 17.313 17.479 0.8 137.66 ? C18 DBW 128 A 1 HETATM 19 O O19 DBW . . . E 4 -42.4 16.586 25.021 0.8 141.06 ? O19 DBW 128 A 1 HETATM 20 C C20 DBW . . . E 4 -43.352 16.707 23.945 0.8 141.07 ? C20 DBW 128 A 1 HETATM 21 C C21 DBW . . . E 4 -35.131 17.97 17.955 0.8 137.92 ? C21 DBW 128 A 1 HETATM 22 O O22 DBW . . . E 4 -33.687 18.958 19.571 0.8 138.38 ? O22 DBW 128 A 1 HETATM 23 O O23 DBW . . . E 4 -34.171 18.197 17.022 0.8 137.45 ? O23 DBW 128 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #