data_3L3R
#
_model_server_result.job_id            6AXPixjdy3aP30QNNJfubQ 
_model_server_result.datetime_utc      '2024-11-08 19:57:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3l3r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":187}' 
#
_entry.id    3L3R 
#
_exptl.entry_id    3L3R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              335.191 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            6-{[(2,5-dichlorophenyl)amino]methyl}pyrido[2,3-d]pyrimidine-2,4-diamine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3L3R 
_cell.length_a            84.53 
_cell.length_b            84.53 
_cell.length_c            78.423 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3L3R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C14 H12 Cl2 N6' 
_chem_comp.formula_weight    335.191 
_chem_comp.id                OAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              6-{[(2,5-dichlorophenyl)amino]methyl}pyrido[2,3-d]pyrimidine-2,4-diamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C10 C1 OAG sing 319 n n 
C1 N1 OAG sing 320 n n 
C1 H1 OAG sing 321 n n 
C1 H1A OAG sing 322 n n 
N1 C1' OAG sing 323 n n 
N1 HN1 OAG sing 324 n n 
C11 CL2 OAG sing 325 n n 
CL5 C5' OAG sing 326 n n 
C4A C9 OAG doub 327 n y 
C9 C10 OAG sing 328 n y 
C9 H9 OAG sing 329 n n 
C6' C1' OAG doub 330 n y 
C1' C11 OAG sing 331 n y 
C2' N1' OAG doub 332 n y 
N1' C8A OAG sing 333 n y 
C7' C10 OAG doub 334 n y 
C11 C3' OAG doub 335 n y 
C5' C12 OAG doub 336 n y 
C12 C3' OAG sing 337 n y 
C12 H12 OAG sing 338 n n 
N2' C2' OAG sing 339 n n 
C2' N3' OAG sing 340 n y 
N2' HN2' OAG sing 341 n n 
N2' HN2A OAG sing 342 n n 
C3' H3' OAG sing 343 n n 
N3' C4' OAG doub 344 n y 
C4' C4A OAG sing 345 n y 
C4' N4' OAG sing 346 n n 
N4' HN4' OAG sing 347 n n 
N4' HN4A OAG sing 348 n n 
C8A C4A OAG sing 349 n y 
C6' C5' OAG sing 350 n y 
C6' H6' OAG sing 351 n n 
N8' C7' OAG sing 352 n y 
C7' H7' OAG sing 353 n n 
C8A N8' OAG doub 354 n y 
#
_atom_sites.entry_id                     3L3R 
_atom_sites.fract_transf_matrix[1][1]    0.01183 
_atom_sites.fract_transf_matrix[1][2]    0.00683 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01366 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012751 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 OAG A 1 187 187 OAG OAG . 
C 3 NDP A 1 188 188 NDP COE . 
D 4 SO4 A 1 189 1 SO4 SO4 . 
E 5 HOH A 1 190 190 HOH HOH . 
E 5 HOH A 2 191 1 HOH HOH . 
E 5 HOH A 3 192 192 HOH HOH . 
E 5 HOH A 4 193 2 HOH HOH . 
E 5 HOH A 5 194 3 HOH HOH . 
E 5 HOH A 6 195 195 HOH HOH . 
E 5 HOH A 7 196 196 HOH HOH . 
E 5 HOH A 8 197 197 HOH HOH . 
E 5 HOH A 9 198 198 HOH HOH . 
E 5 HOH A 10 199 4 HOH HOH . 
E 5 HOH A 11 200 200 HOH HOH . 
E 5 HOH A 12 201 201 HOH HOH . 
E 5 HOH A 13 202 202 HOH HOH . 
E 5 HOH A 14 203 203 HOH HOH . 
E 5 HOH A 15 204 5 HOH HOH . 
E 5 HOH A 16 205 6 HOH HOH . 
E 5 HOH A 17 206 7 HOH HOH . 
E 5 HOH A 18 207 8 HOH HOH . 
E 5 HOH A 19 208 9 HOH HOH . 
E 5 HOH A 20 209 10 HOH HOH . 
E 5 HOH A 21 210 11 HOH HOH . 
E 5 HOH A 22 211 211 HOH HOH . 
E 5 HOH A 23 212 212 HOH HOH . 
E 5 HOH A 24 213 213 HOH HOH . 
E 5 HOH A 25 214 12 HOH HOH . 
E 5 HOH A 26 215 13 HOH HOH . 
E 5 HOH A 27 216 14 HOH HOH . 
E 5 HOH A 28 217 15 HOH HOH . 
E 5 HOH A 29 218 16 HOH HOH . 
E 5 HOH A 30 219 17 HOH HOH . 
E 5 HOH A 31 220 18 HOH HOH . 
E 5 HOH A 32 221 19 HOH HOH . 
E 5 HOH A 33 222 20 HOH HOH . 
E 5 HOH A 34 223 21 HOH HOH . 
E 5 HOH A 35 224 22 HOH HOH . 
E 5 HOH A 36 225 23 HOH HOH . 
E 5 HOH A 37 226 24 HOH HOH . 
E 5 HOH A 38 227 25 HOH HOH . 
E 5 HOH A 39 228 26 HOH HOH . 
E 5 HOH A 40 229 27 HOH HOH . 
E 5 HOH A 41 230 28 HOH HOH . 
E 5 HOH A 42 231 29 HOH HOH . 
E 5 HOH A 43 232 30 HOH HOH . 
E 5 HOH A 44 233 31 HOH HOH . 
E 5 HOH A 45 234 32 HOH HOH . 
E 5 HOH A 46 235 33 HOH HOH . 
E 5 HOH A 47 236 34 HOH HOH . 
E 5 HOH A 48 237 35 HOH HOH . 
E 5 HOH A 49 238 36 HOH HOH . 
E 5 HOH A 50 239 37 HOH HOH . 
E 5 HOH A 51 240 38 HOH HOH . 
E 5 HOH A 52 241 39 HOH HOH . 
E 5 HOH A 53 242 40 HOH HOH . 
E 5 HOH A 54 243 41 HOH HOH . 
E 5 HOH A 55 244 42 HOH HOH . 
E 5 HOH A 56 245 43 HOH HOH . 
E 5 HOH A 57 246 44 HOH HOH . 
E 5 HOH A 58 247 45 HOH HOH . 
E 5 HOH A 59 248 47 HOH HOH . 
E 5 HOH A 60 249 48 HOH HOH . 
E 5 HOH A 61 250 49 HOH HOH . 
E 5 HOH A 62 251 50 HOH HOH . 
E 5 HOH A 63 252 51 HOH HOH . 
E 5 HOH A 64 253 52 HOH HOH . 
E 5 HOH A 65 254 53 HOH HOH . 
E 5 HOH A 66 255 54 HOH HOH . 
E 5 HOH A 67 256 55 HOH HOH . 
E 5 HOH A 68 257 56 HOH HOH . 
E 5 HOH A 69 258 57 HOH HOH . 
E 5 HOH A 70 259 58 HOH HOH . 
E 5 HOH A 71 260 59 HOH HOH . 
E 5 HOH A 72 261 60 HOH HOH . 
E 5 HOH A 73 262 61 HOH HOH . 
E 5 HOH A 74 263 62 HOH HOH . 
E 5 HOH A 75 264 63 HOH HOH . 
E 5 HOH A 76 265 64 HOH HOH . 
E 5 HOH A 77 266 65 HOH HOH . 
E 5 HOH A 78 267 66 HOH HOH . 
E 5 HOH A 79 268 67 HOH HOH . 
E 5 HOH A 80 269 68 HOH HOH . 
E 5 HOH A 81 270 69 HOH HOH . 
E 5 HOH A 82 271 70 HOH HOH . 
E 5 HOH A 83 272 71 HOH HOH . 
E 5 HOH A 84 273 72 HOH HOH . 
E 5 HOH A 85 274 73 HOH HOH . 
E 5 HOH A 86 275 74 HOH HOH . 
E 5 HOH A 87 276 75 HOH HOH . 
E 5 HOH A 88 277 76 HOH HOH . 
E 5 HOH A 89 278 77 HOH HOH . 
E 5 HOH A 90 279 78 HOH HOH . 
E 5 HOH A 91 280 79 HOH HOH . 
E 5 HOH A 92 281 80 HOH HOH . 
E 5 HOH A 93 282 81 HOH HOH . 
E 5 HOH A 94 283 82 HOH HOH . 
E 5 HOH A 95 284 83 HOH HOH . 
E 5 HOH A 96 285 84 HOH HOH . 
E 5 HOH A 97 286 85 HOH HOH . 
E 5 HOH A 98 287 86 HOH HOH . 
E 5 HOH A 99 288 87 HOH HOH . 
E 5 HOH A 100 289 88 HOH HOH . 
E 5 HOH A 101 290 89 HOH HOH . 
E 5 HOH A 102 291 90 HOH HOH . 
E 5 HOH A 103 292 91 HOH HOH . 
E 5 HOH A 104 293 92 HOH HOH . 
E 5 HOH A 105 294 93 HOH HOH . 
E 5 HOH A 106 295 94 HOH HOH . 
E 5 HOH A 107 296 95 HOH HOH . 
E 5 HOH A 108 297 96 HOH HOH . 
E 5 HOH A 109 298 97 HOH HOH . 
E 5 HOH A 110 299 98 HOH HOH . 
E 5 HOH A 111 300 99 HOH HOH . 
E 5 HOH A 112 301 101 HOH HOH . 
E 5 HOH A 113 302 102 HOH HOH . 
E 5 HOH A 114 303 103 HOH HOH . 
E 5 HOH A 115 304 104 HOH HOH . 
E 5 HOH A 116 305 105 HOH HOH . 
E 5 HOH A 117 306 106 HOH HOH . 
E 5 HOH A 118 307 107 HOH HOH . 
E 5 HOH A 119 308 108 HOH HOH . 
E 5 HOH A 120 309 109 HOH HOH . 
E 5 HOH A 121 310 110 HOH HOH . 
E 5 HOH A 122 311 111 HOH HOH . 
E 5 HOH A 123 312 112 HOH HOH . 
E 5 HOH A 124 313 113 HOH HOH . 
E 5 HOH A 125 314 114 HOH HOH . 
E 5 HOH A 126 315 115 HOH HOH . 
E 5 HOH A 127 316 116 HOH HOH . 
E 5 HOH A 128 317 117 HOH HOH . 
E 5 HOH A 129 318 118 HOH HOH . 
E 5 HOH A 130 319 119 HOH HOH . 
E 5 HOH A 131 320 120 HOH HOH . 
E 5 HOH A 132 321 121 HOH HOH . 
E 5 HOH A 133 322 122 HOH HOH . 
E 5 HOH A 134 323 123 HOH HOH . 
E 5 HOH A 135 324 124 HOH HOH . 
E 5 HOH A 136 325 125 HOH HOH . 
E 5 HOH A 137 326 126 HOH HOH . 
E 5 HOH A 138 327 127 HOH HOH . 
E 5 HOH A 139 328 128 HOH HOH . 
E 5 HOH A 140 329 129 HOH HOH . 
E 5 HOH A 141 330 130 HOH HOH . 
E 5 HOH A 142 331 131 HOH HOH . 
E 5 HOH A 143 332 132 HOH HOH . 
E 5 HOH A 144 333 133 HOH HOH . 
E 5 HOH A 145 334 134 HOH HOH . 
E 5 HOH A 146 335 135 HOH HOH . 
E 5 HOH A 147 336 136 HOH HOH . 
E 5 HOH A 148 337 137 HOH HOH . 
E 5 HOH A 149 338 138 HOH HOH . 
E 5 HOH A 150 339 139 HOH HOH . 
E 5 HOH A 151 340 140 HOH HOH . 
E 5 HOH A 152 341 141 HOH HOH . 
E 5 HOH A 153 342 143 HOH HOH . 
E 5 HOH A 154 343 144 HOH HOH . 
E 5 HOH A 155 344 145 HOH HOH . 
E 5 HOH A 156 345 146 HOH HOH . 
E 5 HOH A 157 346 147 HOH HOH . 
E 5 HOH A 158 347 148 HOH HOH . 
E 5 HOH A 159 348 149 HOH HOH . 
E 5 HOH A 160 349 151 HOH HOH . 
E 5 HOH A 161 350 152 HOH HOH . 
E 5 HOH A 162 351 153 HOH HOH . 
E 5 HOH A 163 352 154 HOH HOH . 
E 5 HOH A 164 353 155 HOH HOH . 
E 5 HOH A 165 354 156 HOH HOH . 
E 5 HOH A 166 355 157 HOH HOH . 
E 5 HOH A 167 356 158 HOH HOH . 
E 5 HOH A 168 357 160 HOH HOH . 
E 5 HOH A 169 358 161 HOH HOH . 
E 5 HOH A 170 359 162 HOH HOH . 
E 5 HOH A 171 360 163 HOH HOH . 
E 5 HOH A 172 361 164 HOH HOH . 
E 5 HOH A 173 362 165 HOH HOH . 
E 5 HOH A 174 363 166 HOH HOH . 
E 5 HOH A 175 364 168 HOH HOH . 
E 5 HOH A 176 365 169 HOH HOH . 
E 5 HOH A 177 366 170 HOH HOH . 
E 5 HOH A 178 367 171 HOH HOH . 
E 5 HOH A 179 368 172 HOH HOH . 
E 5 HOH A 180 369 173 HOH HOH . 
E 5 HOH A 181 370 174 HOH HOH . 
E 5 HOH A 182 371 176 HOH HOH . 
E 5 HOH A 183 372 177 HOH HOH . 
E 5 HOH A 184 373 178 HOH HOH . 
E 5 HOH A 185 374 179 HOH HOH . 
E 5 HOH A 186 375 180 HOH HOH . 
E 5 HOH A 187 376 183 HOH HOH . 
E 5 HOH A 188 377 184 HOH HOH . 
E 5 HOH A 189 378 188 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OAG . . . B 2 15.157 5.208 -1.997 1 36.3 ? C1 OAG 187 A 1 
HETATM 2 N N1 OAG . . . B 2 14.077 4.205 -2.203 1 38 ? N1 OAG 187 A 1 
HETATM 3 CL CL2 OAG . . . B 2 12.549 1.607 -2.175 1 46.08 ? CL2 OAG 187 A 1 
HETATM 4 CL CL5 OAG . . . B 2 10.078 7.244 -1.186 1 48.41 ? CL5 OAG 187 A 1 
HETATM 5 C C9 OAG . . . B 2 16.641 6.303 -0.248 1 28.82 ? C9 OAG 187 A 1 
HETATM 6 C C1' OAG . . . B 2 12.767 4.369 -1.945 1 40.87 ? C1' OAG 187 A 1 
HETATM 7 N N1' OAG . . . B 2 16.967 5.974 3.385 1 20.73 ? N1' OAG 187 A 1 
HETATM 8 C C10 OAG . . . B 2 15.613 5.39 -0.49 1 32.92 ? C10 OAG 187 A 1 
HETATM 9 C C11 OAG . . . B 2 11.928 3.218 -1.896 1 44.75 ? C11 OAG 187 A 1 
HETATM 10 C C12 OAG . . . B 2 9.995 4.603 -1.419 1 42.58 ? C12 OAG 187 A 1 
HETATM 11 C C2' OAG . . . B 2 17.962 6.897 3.571 1 14.27 ? C2' OAG 187 A 1 
HETATM 12 N N2' OAG . . . B 2 18.402 7.153 4.793 1 12.96 ? N2' OAG 187 A 1 
HETATM 13 C C3' OAG . . . B 2 10.557 3.348 -1.634 1 45.48 ? C3' OAG 187 A 1 
HETATM 14 N N3' OAG . . . B 2 18.542 7.541 2.542 1 13.37 ? N3' OAG 187 A 1 
HETATM 15 C C4' OAG . . . B 2 18.115 7.375 1.288 1 17.39 ? C4' OAG 187 A 1 
HETATM 16 N N4' OAG . . . B 2 18.618 8.031 0.261 1 16.26 ? N4' OAG 187 A 1 
HETATM 17 C C4A OAG . . . B 2 17.084 6.482 1.066 1 24.59 ? C4A OAG 187 A 1 
HETATM 18 C C5' OAG . . . B 2 10.823 5.72 -1.47 1 43.77 ? C5' OAG 187 A 1 
HETATM 19 C C6' OAG . . . B 2 12.195 5.626 -1.735 1 42.69 ? C6' OAG 187 A 1 
HETATM 20 C C7' OAG . . . B 2 15.077 4.69 0.614 1 30.72 ? C7' OAG 187 A 1 
HETATM 21 N N8' OAG . . . B 2 15.497 4.865 1.885 1 30.23 ? N8' OAG 187 A 1 
HETATM 22 C C8A OAG . . . B 2 16.498 5.77 2.139 1 26.01 ? C8A OAG 187 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           22 
#