data_3L3X # _model_server_result.job_id 1ZGOkohA2dsjBrImE3W5dA _model_server_result.datetime_utc '2024-11-17 11:53:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3l3x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3L3X # _exptl.entry_id 3L3X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 290.44 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-ALPHA-DIHYDROTESTOSTERONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3L3X _cell.length_a 57.314 _cell.length_b 66.704 _cell.length_c 73.137 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3L3X _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 176 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 844 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 184 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 852 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.048 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C19 H30 O2' _chem_comp.formula_weight 290.44 _chem_comp.id DHT _chem_comp.mon_nstd_flag . _chem_comp.name 5-ALPHA-DIHYDROTESTOSTERONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DHT sing 83 n n C1 C10 DHT sing 84 n n C1 H11 DHT sing 85 n n C1 H12 DHT sing 86 n n C2 C3 DHT sing 87 n n C2 H21 DHT sing 88 n n C2 H22 DHT sing 89 n n C3 O3 DHT doub 90 n n C3 C4 DHT sing 91 n n C4 C5 DHT sing 92 n n C4 H41 DHT sing 93 n n C4 H42 DHT sing 94 n n C5 C6 DHT sing 95 n n C5 C10 DHT sing 96 n n C5 H5 DHT sing 97 n n C6 C7 DHT sing 98 n n C6 H61 DHT sing 99 n n C6 H62 DHT sing 100 n n C7 C8 DHT sing 101 n n C7 H71 DHT sing 102 n n C7 H72 DHT sing 103 n n C8 C9 DHT sing 104 n n C8 C14 DHT sing 105 n n C8 H8 DHT sing 106 n n C9 C10 DHT sing 107 n n C9 C11 DHT sing 108 n n C9 H9 DHT sing 109 n n C10 C19 DHT sing 110 n n C11 C12 DHT sing 111 n n C11 H111 DHT sing 112 n n C11 H112 DHT sing 113 n n C12 C13 DHT sing 114 n n C12 H121 DHT sing 115 n n C12 H122 DHT sing 116 n n C13 C14 DHT sing 117 n n C13 C17 DHT sing 118 n n C13 C18 DHT sing 119 n n C14 C15 DHT sing 120 n n C14 H14 DHT sing 121 n n C15 C16 DHT sing 122 n n C15 H151 DHT sing 123 n n C15 H152 DHT sing 124 n n C16 C17 DHT sing 125 n n C16 H161 DHT sing 126 n n C16 H162 DHT sing 127 n n C17 O17 DHT sing 128 n n C17 H17 DHT sing 129 n n O17 HO7 DHT sing 130 n n C18 H181 DHT sing 131 n n C18 H182 DHT sing 132 n n C18 H183 DHT sing 133 n n C19 H191 DHT sing 134 n n C19 H192 DHT sing 135 n n C19 H193 DHT sing 136 n n # _atom_sites.entry_id 3L3X _atom_sites.fract_transf_matrix[1][1] 0.017448 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014992 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013673 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DHT A 1 1 1 DHT DHT . D 4 HOH A 1 2 2 HOH HOH . D 4 HOH A 2 3 3 HOH HOH . D 4 HOH A 3 4 4 HOH HOH . D 4 HOH A 4 5 5 HOH HOH . D 4 HOH A 5 6 6 HOH HOH . D 4 HOH A 6 7 7 HOH HOH . D 4 HOH A 7 8 8 HOH HOH . D 4 HOH A 8 9 9 HOH HOH . D 4 HOH A 9 10 10 HOH HOH . D 4 HOH A 10 11 11 HOH HOH . D 4 HOH A 11 12 12 HOH HOH . D 4 HOH A 12 13 13 HOH HOH . D 4 HOH A 13 14 14 HOH HOH . D 4 HOH A 14 15 15 HOH HOH . D 4 HOH A 15 16 16 HOH HOH . D 4 HOH A 16 17 17 HOH HOH . D 4 HOH A 17 18 18 HOH HOH . D 4 HOH A 18 19 19 HOH HOH . D 4 HOH A 19 20 20 HOH HOH . D 4 HOH A 20 21 21 HOH HOH . D 4 HOH A 21 22 22 HOH HOH . D 4 HOH A 22 23 23 HOH HOH . D 4 HOH A 23 24 24 HOH HOH . D 4 HOH A 24 25 25 HOH HOH . D 4 HOH A 25 26 26 HOH HOH . D 4 HOH A 26 27 27 HOH HOH . D 4 HOH A 27 28 28 HOH HOH . D 4 HOH A 28 29 29 HOH HOH . D 4 HOH A 29 30 30 HOH HOH . D 4 HOH A 30 31 31 HOH HOH . D 4 HOH A 31 32 32 HOH HOH . D 4 HOH A 32 33 33 HOH HOH . D 4 HOH A 33 34 34 HOH HOH . D 4 HOH A 34 35 35 HOH HOH . D 4 HOH A 35 36 36 HOH HOH . D 4 HOH A 36 37 37 HOH HOH . D 4 HOH A 37 38 38 HOH HOH . D 4 HOH A 38 39 39 HOH HOH . D 4 HOH A 39 40 40 HOH HOH . D 4 HOH A 40 41 41 HOH HOH . D 4 HOH A 41 42 42 HOH HOH . D 4 HOH A 42 43 43 HOH HOH . D 4 HOH A 43 44 44 HOH HOH . D 4 HOH A 44 45 45 HOH HOH . D 4 HOH A 45 46 46 HOH HOH . D 4 HOH A 46 47 47 HOH HOH . D 4 HOH A 47 48 48 HOH HOH . D 4 HOH A 48 49 49 HOH HOH . D 4 HOH A 49 50 50 HOH HOH . D 4 HOH A 50 51 51 HOH HOH . D 4 HOH A 51 52 52 HOH HOH . D 4 HOH A 52 53 53 HOH HOH . D 4 HOH A 53 54 54 HOH HOH . D 4 HOH A 54 55 55 HOH HOH . D 4 HOH A 55 56 56 HOH HOH . D 4 HOH A 56 57 57 HOH HOH . D 4 HOH A 57 58 58 HOH HOH . D 4 HOH A 58 59 59 HOH HOH . D 4 HOH A 59 60 60 HOH HOH . D 4 HOH A 60 61 61 HOH HOH . D 4 HOH A 61 62 62 HOH HOH . D 4 HOH A 62 63 63 HOH HOH . D 4 HOH A 63 64 64 HOH HOH . D 4 HOH A 64 65 65 HOH HOH . D 4 HOH A 65 66 66 HOH HOH . D 4 HOH A 66 67 67 HOH HOH . D 4 HOH A 67 68 68 HOH HOH . D 4 HOH A 68 69 69 HOH HOH . D 4 HOH A 69 70 70 HOH HOH . D 4 HOH A 70 71 71 HOH HOH . D 4 HOH A 71 72 72 HOH HOH . D 4 HOH A 72 73 73 HOH HOH . D 4 HOH A 73 74 74 HOH HOH . D 4 HOH A 74 75 75 HOH HOH . D 4 HOH A 75 76 76 HOH HOH . D 4 HOH A 76 77 77 HOH HOH . D 4 HOH A 77 78 78 HOH HOH . D 4 HOH A 78 79 79 HOH HOH . D 4 HOH A 79 80 80 HOH HOH . D 4 HOH A 80 81 81 HOH HOH . D 4 HOH A 81 82 82 HOH HOH . D 4 HOH A 82 83 83 HOH HOH . D 4 HOH A 83 84 84 HOH HOH . D 4 HOH A 84 85 85 HOH HOH . D 4 HOH A 85 86 86 HOH HOH . D 4 HOH A 86 87 87 HOH HOH . D 4 HOH A 87 88 88 HOH HOH . D 4 HOH A 88 89 89 HOH HOH . D 4 HOH A 89 90 90 HOH HOH . D 4 HOH A 90 91 91 HOH HOH . D 4 HOH A 91 92 92 HOH HOH . D 4 HOH A 92 93 93 HOH HOH . D 4 HOH A 93 94 94 HOH HOH . D 4 HOH A 94 95 95 HOH HOH . D 4 HOH A 95 96 96 HOH HOH . D 4 HOH A 96 97 97 HOH HOH . D 4 HOH A 97 98 98 HOH HOH . D 4 HOH A 98 99 99 HOH HOH . D 4 HOH A 99 101 101 HOH HOH . D 4 HOH A 100 102 102 HOH HOH . D 4 HOH A 101 103 103 HOH HOH . D 4 HOH A 102 104 104 HOH HOH . D 4 HOH A 103 105 105 HOH HOH . D 4 HOH A 104 106 106 HOH HOH . D 4 HOH A 105 107 107 HOH HOH . D 4 HOH A 106 109 109 HOH HOH . D 4 HOH A 107 111 111 HOH HOH . D 4 HOH A 108 112 112 HOH HOH . D 4 HOH A 109 113 113 HOH HOH . D 4 HOH A 110 114 114 HOH HOH . D 4 HOH A 111 115 115 HOH HOH . D 4 HOH A 112 116 116 HOH HOH . D 4 HOH A 113 117 117 HOH HOH . D 4 HOH A 114 118 118 HOH HOH . D 4 HOH A 115 119 119 HOH HOH . D 4 HOH A 116 120 120 HOH HOH . D 4 HOH A 117 121 121 HOH HOH . D 4 HOH A 118 122 122 HOH HOH . D 4 HOH A 119 123 123 HOH HOH . D 4 HOH A 120 124 124 HOH HOH . D 4 HOH A 121 125 125 HOH HOH . D 4 HOH A 122 126 126 HOH HOH . D 4 HOH A 123 127 127 HOH HOH . D 4 HOH A 124 128 128 HOH HOH . D 4 HOH A 125 129 129 HOH HOH . D 4 HOH A 126 130 130 HOH HOH . D 4 HOH A 127 131 131 HOH HOH . D 4 HOH A 128 132 132 HOH HOH . D 4 HOH A 129 133 133 HOH HOH . D 4 HOH A 130 134 134 HOH HOH . D 4 HOH A 131 135 135 HOH HOH . D 4 HOH A 132 136 136 HOH HOH . D 4 HOH A 133 137 137 HOH HOH . D 4 HOH A 134 138 138 HOH HOH . D 4 HOH A 135 139 139 HOH HOH . D 4 HOH A 136 140 140 HOH HOH . D 4 HOH A 137 141 141 HOH HOH . D 4 HOH A 138 142 142 HOH HOH . D 4 HOH A 139 143 143 HOH HOH . D 4 HOH A 140 144 144 HOH HOH . D 4 HOH A 141 145 145 HOH HOH . D 4 HOH A 142 146 146 HOH HOH . D 4 HOH A 143 147 147 HOH HOH . D 4 HOH A 144 148 148 HOH HOH . D 4 HOH A 145 149 149 HOH HOH . D 4 HOH A 146 150 150 HOH HOH . D 4 HOH A 147 151 151 HOH HOH . D 4 HOH A 148 152 152 HOH HOH . D 4 HOH A 149 153 153 HOH HOH . D 4 HOH A 150 154 154 HOH HOH . D 4 HOH A 151 155 155 HOH HOH . D 4 HOH A 152 156 156 HOH HOH . D 4 HOH A 153 157 157 HOH HOH . D 4 HOH A 154 158 158 HOH HOH . D 4 HOH A 155 159 159 HOH HOH . D 4 HOH A 156 160 160 HOH HOH . D 4 HOH A 157 161 161 HOH HOH . D 4 HOH A 158 162 162 HOH HOH . D 4 HOH A 159 163 163 HOH HOH . D 4 HOH A 160 164 164 HOH HOH . D 4 HOH A 161 165 165 HOH HOH . D 4 HOH A 162 166 166 HOH HOH . D 4 HOH A 163 167 167 HOH HOH . D 4 HOH A 164 168 168 HOH HOH . D 4 HOH A 165 169 169 HOH HOH . D 4 HOH A 166 170 170 HOH HOH . D 4 HOH A 167 171 171 HOH HOH . D 4 HOH A 168 172 172 HOH HOH . D 4 HOH A 169 173 173 HOH HOH . D 4 HOH A 170 174 174 HOH HOH . D 4 HOH A 171 175 175 HOH HOH . D 4 HOH A 172 176 176 HOH HOH . D 4 HOH A 173 177 177 HOH HOH . D 4 HOH A 174 178 178 HOH HOH . D 4 HOH A 175 179 179 HOH HOH . D 4 HOH A 176 180 180 HOH HOH . D 4 HOH A 177 181 181 HOH HOH . D 4 HOH A 178 182 182 HOH HOH . D 4 HOH A 179 183 183 HOH HOH . D 4 HOH A 180 184 184 HOH HOH . D 4 HOH A 181 185 185 HOH HOH . D 4 HOH A 182 186 186 HOH HOH . D 4 HOH A 183 187 187 HOH HOH . D 4 HOH A 184 188 188 HOH HOH . D 4 HOH A 185 189 189 HOH HOH . D 4 HOH A 186 190 190 HOH HOH . D 4 HOH A 187 191 191 HOH HOH . D 4 HOH A 188 192 192 HOH HOH . D 4 HOH A 189 193 193 HOH HOH . D 4 HOH A 190 194 194 HOH HOH . D 4 HOH A 191 195 195 HOH HOH . D 4 HOH A 192 196 196 HOH HOH . D 4 HOH A 193 197 197 HOH HOH . D 4 HOH A 194 198 198 HOH HOH . D 4 HOH A 195 199 199 HOH HOH . D 4 HOH A 196 200 200 HOH HOH . D 4 HOH A 197 201 201 HOH HOH . D 4 HOH A 198 202 202 HOH HOH . D 4 HOH A 199 203 203 HOH HOH . D 4 HOH A 200 204 204 HOH HOH . D 4 HOH A 201 205 205 HOH HOH . D 4 HOH A 202 206 206 HOH HOH . D 4 HOH A 203 208 208 HOH HOH . D 4 HOH A 204 209 209 HOH HOH . D 4 HOH A 205 210 210 HOH HOH . D 4 HOH A 206 211 211 HOH HOH . D 4 HOH A 207 919 1 HOH HOH . E 4 HOH B 1 100 100 HOH HOH . E 4 HOH B 2 108 108 HOH HOH . E 4 HOH B 3 110 110 HOH HOH . E 4 HOH B 4 207 207 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DHT . . . C 3 1.07 28.573 5.14 1 16.68 ? C1 DHT 1 A 1 HETATM 2 C C2 DHT . . . C 3 1.853 27.307 5.532 1 17.2 ? C2 DHT 1 A 1 HETATM 3 C C3 DHT . . . C 3 3.27 27.388 5.027 1 19 ? C3 DHT 1 A 1 HETATM 4 O O3 DHT . . . C 3 3.776 26.416 4.485 1 21.26 ? O3 DHT 1 A 1 HETATM 5 C C4 DHT . . . C 3 4 28.678 5.27 1 18.51 ? C4 DHT 1 A 1 HETATM 6 C C5 DHT . . . C 3 3.133 29.875 4.851 1 17.84 ? C5 DHT 1 A 1 HETATM 7 C C6 DHT . . . C 3 3.924 31.195 5.041 1 16.61 ? C6 DHT 1 A 1 HETATM 8 C C7 DHT . . . C 3 3.121 32.377 4.501 1 16.52 ? C7 DHT 1 A 1 HETATM 9 C C8 DHT . . . C 3 1.701 32.458 5.094 1 16.33 ? C8 DHT 1 A 1 HETATM 10 C C9 DHT . . . C 3 0.958 31.106 4.93 1 16.57 ? C9 DHT 1 A 1 HETATM 11 C C10 DHT . . . C 3 1.747 29.894 5.501 1 17.67 ? C10 DHT 1 A 1 HETATM 12 C C11 DHT . . . C 3 -0.489 31.192 5.479 1 17.47 ? C11 DHT 1 A 1 HETATM 13 C C12 DHT . . . C 3 -1.29 32.388 4.948 1 18.21 ? C12 DHT 1 A 1 HETATM 14 C C13 DHT . . . C 3 -0.524 33.717 5.05 1 16.91 ? C13 DHT 1 A 1 HETATM 15 C C14 DHT . . . C 3 0.87 33.561 4.451 1 16.84 ? C14 DHT 1 A 1 HETATM 16 C C15 DHT . . . C 3 1.407 34.995 4.415 1 17.6 ? C15 DHT 1 A 1 HETATM 17 C C16 DHT . . . C 3 0.18 35.839 4.035 1 17.61 ? C16 DHT 1 A 1 HETATM 18 C C17 DHT . . . C 3 -1.013 34.889 4.168 1 16.7 ? C17 DHT 1 A 1 HETATM 19 O O17 DHT . . . C 3 -2.204 35.548 4.662 1 19.02 ? O17 DHT 1 A 1 HETATM 20 C C18 DHT . . . C 3 -0.457 34.119 6.521 1 18.25 ? C18 DHT 1 A 1 HETATM 21 C C19 DHT . . . C 3 1.844 29.979 7.03 1 19.21 ? C19 DHT 1 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 211 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 21 #