data_3L48 # _model_server_result.job_id fFy3BPov2ex2j2rcL6e0Zg _model_server_result.datetime_utc '2024-11-18 08:30:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3l48 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1}' # _entry.id 3L48 # _exptl.entry_id 3L48 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3L48 _cell.length_a 100.936 _cell.length_b 100.936 _cell.length_c 89.54 _cell.Z_PDB 40 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3L48 _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,F,H 1 1 B,I 2 1 C,G,J 3 1 D,K 4 1 E,L 5 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 A CYS 787 1_555 A SG CYS 84 A CYS 805 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 B SG CYS 66 B CYS 787 1_555 B SG CYS 84 B CYS 805 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 C SG CYS 66 C CYS 787 1_555 C SG CYS 84 C CYS 805 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 D SG CYS 66 D CYS 787 1_555 D SG CYS 84 D CYS 805 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 E SG CYS 66 E CYS 787 1_555 E SG CYS 84 E CYS 805 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 F CO CO . A CO 2 1_555 H O HOH . A HOH 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? metalc ? metalc2 F CO CO . A CO 2 1_555 A OE1 GLU 35 A GLU 756 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc3 G CO CO . C CO 1 1_555 J O HOH . C HOH 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? metalc ? metalc4 G CO CO . C CO 1 1_555 C OE2 GLU 31 C GLU 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3L48 _atom_sites.fract_transf_matrix[1][1] 0.009907 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009907 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011168 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 CO A 1 2 2 CO CO . G 2 CO C 1 1 1 CO CO . H 3 HOH A 1 5 5 HOH HOH . H 3 HOH A 2 9 9 HOH HOH . H 3 HOH A 3 10 10 HOH HOH . H 3 HOH A 4 13 13 HOH HOH . H 3 HOH A 5 19 19 HOH HOH . H 3 HOH A 6 20 20 HOH HOH . H 3 HOH A 7 23 23 HOH HOH . H 3 HOH A 8 24 24 HOH HOH . H 3 HOH A 9 37 37 HOH HOH . H 3 HOH A 10 40 40 HOH HOH . H 3 HOH A 11 45 45 HOH HOH . H 3 HOH A 12 47 47 HOH HOH . H 3 HOH A 13 61 61 HOH HOH . H 3 HOH A 14 62 62 HOH HOH . H 3 HOH A 15 64 64 HOH HOH . H 3 HOH A 16 75 75 HOH HOH . H 3 HOH A 17 79 79 HOH HOH . H 3 HOH A 18 81 81 HOH HOH . H 3 HOH A 19 84 84 HOH HOH . H 3 HOH A 20 88 88 HOH HOH . H 3 HOH A 21 91 91 HOH HOH . H 3 HOH A 22 96 96 HOH HOH . H 3 HOH A 23 102 102 HOH HOH . H 3 HOH A 24 103 103 HOH HOH . H 3 HOH A 25 104 104 HOH HOH . H 3 HOH A 26 107 107 HOH HOH . H 3 HOH A 27 110 110 HOH HOH . H 3 HOH A 28 111 111 HOH HOH . H 3 HOH A 29 112 112 HOH HOH . H 3 HOH A 30 115 115 HOH HOH . H 3 HOH A 31 121 121 HOH HOH . H 3 HOH A 32 123 123 HOH HOH . H 3 HOH A 33 132 132 HOH HOH . H 3 HOH A 34 134 134 HOH HOH . H 3 HOH A 35 141 141 HOH HOH . H 3 HOH A 36 144 144 HOH HOH . H 3 HOH A 37 145 145 HOH HOH . H 3 HOH A 38 152 152 HOH HOH . H 3 HOH A 39 153 153 HOH HOH . H 3 HOH A 40 156 156 HOH HOH . H 3 HOH A 41 160 160 HOH HOH . H 3 HOH A 42 163 163 HOH HOH . H 3 HOH A 43 168 168 HOH HOH . H 3 HOH A 44 172 172 HOH HOH . H 3 HOH A 45 174 174 HOH HOH . H 3 HOH A 46 186 186 HOH HOH . H 3 HOH A 47 192 192 HOH HOH . H 3 HOH A 48 197 197 HOH HOH . H 3 HOH A 49 208 208 HOH HOH . H 3 HOH A 50 209 209 HOH HOH . H 3 HOH A 51 210 210 HOH HOH . H 3 HOH A 52 218 218 HOH HOH . H 3 HOH A 53 220 220 HOH HOH . H 3 HOH A 54 227 227 HOH HOH . H 3 HOH A 55 229 229 HOH HOH . H 3 HOH A 56 230 230 HOH HOH . H 3 HOH A 57 240 240 HOH HOH . I 3 HOH B 1 2 2 HOH HOH . I 3 HOH B 2 3 3 HOH HOH . I 3 HOH B 3 6 6 HOH HOH . I 3 HOH B 4 12 12 HOH HOH . I 3 HOH B 5 15 15 HOH HOH . I 3 HOH B 6 16 16 HOH HOH . I 3 HOH B 7 17 17 HOH HOH . I 3 HOH B 8 39 39 HOH HOH . I 3 HOH B 9 42 42 HOH HOH . I 3 HOH B 10 49 49 HOH HOH . I 3 HOH B 11 50 50 HOH HOH . I 3 HOH B 12 54 54 HOH HOH . I 3 HOH B 13 56 56 HOH HOH . I 3 HOH B 14 59 59 HOH HOH . I 3 HOH B 15 60 60 HOH HOH . I 3 HOH B 16 70 70 HOH HOH . I 3 HOH B 17 77 77 HOH HOH . I 3 HOH B 18 78 78 HOH HOH . I 3 HOH B 19 83 83 HOH HOH . I 3 HOH B 20 86 86 HOH HOH . I 3 HOH B 21 92 92 HOH HOH . I 3 HOH B 22 93 93 HOH HOH . I 3 HOH B 23 95 95 HOH HOH . I 3 HOH B 24 97 97 HOH HOH . I 3 HOH B 25 108 108 HOH HOH . I 3 HOH B 26 116 116 HOH HOH . I 3 HOH B 27 118 118 HOH HOH . I 3 HOH B 28 124 124 HOH HOH . I 3 HOH B 29 125 125 HOH HOH . I 3 HOH B 30 128 128 HOH HOH . I 3 HOH B 31 131 131 HOH HOH . I 3 HOH B 32 135 135 HOH HOH . I 3 HOH B 33 146 146 HOH HOH . I 3 HOH B 34 147 147 HOH HOH . I 3 HOH B 35 148 148 HOH HOH . I 3 HOH B 36 149 149 HOH HOH . I 3 HOH B 37 150 150 HOH HOH . I 3 HOH B 38 161 161 HOH HOH . I 3 HOH B 39 164 164 HOH HOH . I 3 HOH B 40 165 165 HOH HOH . I 3 HOH B 41 173 173 HOH HOH . I 3 HOH B 42 180 180 HOH HOH . I 3 HOH B 43 181 181 HOH HOH . I 3 HOH B 44 189 189 HOH HOH . I 3 HOH B 45 190 190 HOH HOH . I 3 HOH B 46 198 198 HOH HOH . I 3 HOH B 47 207 207 HOH HOH . I 3 HOH B 48 212 212 HOH HOH . I 3 HOH B 49 232 232 HOH HOH . I 3 HOH B 50 236 236 HOH HOH . J 3 HOH C 1 18 18 HOH HOH . J 3 HOH C 2 22 22 HOH HOH . J 3 HOH C 3 30 30 HOH HOH . J 3 HOH C 4 36 36 HOH HOH . J 3 HOH C 5 43 43 HOH HOH . J 3 HOH C 6 52 52 HOH HOH . J 3 HOH C 7 80 80 HOH HOH . J 3 HOH C 8 87 87 HOH HOH . J 3 HOH C 9 99 99 HOH HOH . J 3 HOH C 10 105 105 HOH HOH . J 3 HOH C 11 106 106 HOH HOH . J 3 HOH C 12 119 119 HOH HOH . J 3 HOH C 13 126 126 HOH HOH . J 3 HOH C 14 154 154 HOH HOH . J 3 HOH C 15 155 155 HOH HOH . J 3 HOH C 16 157 157 HOH HOH . J 3 HOH C 17 169 169 HOH HOH . J 3 HOH C 18 175 175 HOH HOH . J 3 HOH C 19 178 178 HOH HOH . J 3 HOH C 20 185 185 HOH HOH . J 3 HOH C 21 187 187 HOH HOH . J 3 HOH C 22 188 188 HOH HOH . J 3 HOH C 23 193 193 HOH HOH . J 3 HOH C 24 214 214 HOH HOH . J 3 HOH C 25 215 215 HOH HOH . J 3 HOH C 26 216 216 HOH HOH . J 3 HOH C 27 219 219 HOH HOH . J 3 HOH C 28 221 221 HOH HOH . J 3 HOH C 29 222 222 HOH HOH . J 3 HOH C 30 223 223 HOH HOH . J 3 HOH C 31 224 224 HOH HOH . J 3 HOH C 32 225 225 HOH HOH . J 3 HOH C 33 226 226 HOH HOH . J 3 HOH C 34 228 228 HOH HOH . J 3 HOH C 35 231 231 HOH HOH . J 3 HOH C 36 235 235 HOH HOH . J 3 HOH C 37 238 238 HOH HOH . K 3 HOH D 1 1 1 HOH HOH . K 3 HOH D 2 14 14 HOH HOH . K 3 HOH D 3 21 21 HOH HOH . K 3 HOH D 4 25 25 HOH HOH . K 3 HOH D 5 29 29 HOH HOH . K 3 HOH D 6 31 31 HOH HOH . K 3 HOH D 7 34 34 HOH HOH . K 3 HOH D 8 38 38 HOH HOH . K 3 HOH D 9 41 41 HOH HOH . K 3 HOH D 10 46 46 HOH HOH . K 3 HOH D 11 48 48 HOH HOH . K 3 HOH D 12 55 55 HOH HOH . K 3 HOH D 13 63 63 HOH HOH . K 3 HOH D 14 65 65 HOH HOH . K 3 HOH D 15 66 66 HOH HOH . K 3 HOH D 16 67 67 HOH HOH . K 3 HOH D 17 73 73 HOH HOH . K 3 HOH D 18 74 74 HOH HOH . K 3 HOH D 19 76 76 HOH HOH . K 3 HOH D 20 90 90 HOH HOH . K 3 HOH D 21 94 94 HOH HOH . K 3 HOH D 22 98 98 HOH HOH . K 3 HOH D 23 100 100 HOH HOH . K 3 HOH D 24 109 109 HOH HOH . K 3 HOH D 25 117 117 HOH HOH . K 3 HOH D 26 122 122 HOH HOH . K 3 HOH D 27 130 130 HOH HOH . K 3 HOH D 28 140 140 HOH HOH . K 3 HOH D 29 142 142 HOH HOH . K 3 HOH D 30 151 151 HOH HOH . K 3 HOH D 31 158 158 HOH HOH . K 3 HOH D 32 162 162 HOH HOH . K 3 HOH D 33 166 166 HOH HOH . K 3 HOH D 34 170 170 HOH HOH . K 3 HOH D 35 171 171 HOH HOH . K 3 HOH D 36 179 179 HOH HOH . K 3 HOH D 37 182 182 HOH HOH . K 3 HOH D 38 196 196 HOH HOH . K 3 HOH D 39 199 199 HOH HOH . K 3 HOH D 40 200 200 HOH HOH . K 3 HOH D 41 201 201 HOH HOH . K 3 HOH D 42 203 203 HOH HOH . K 3 HOH D 43 204 204 HOH HOH . K 3 HOH D 44 205 205 HOH HOH . K 3 HOH D 45 211 211 HOH HOH . K 3 HOH D 46 217 217 HOH HOH . K 3 HOH D 47 233 233 HOH HOH . K 3 HOH D 48 239 239 HOH HOH . K 3 HOH D 49 241 241 HOH HOH . K 3 HOH D 50 242 242 HOH HOH . K 3 HOH D 51 243 243 HOH HOH . K 3 HOH D 52 244 244 HOH HOH . K 3 HOH D 53 245 245 HOH HOH . L 3 HOH E 1 4 4 HOH HOH . L 3 HOH E 2 7 7 HOH HOH . L 3 HOH E 3 8 8 HOH HOH . L 3 HOH E 4 11 11 HOH HOH . L 3 HOH E 5 26 26 HOH HOH . L 3 HOH E 6 27 27 HOH HOH . L 3 HOH E 7 28 28 HOH HOH . L 3 HOH E 8 32 32 HOH HOH . L 3 HOH E 9 33 33 HOH HOH . L 3 HOH E 10 35 35 HOH HOH . L 3 HOH E 11 44 44 HOH HOH . L 3 HOH E 12 51 51 HOH HOH . L 3 HOH E 13 53 53 HOH HOH . L 3 HOH E 14 57 57 HOH HOH . L 3 HOH E 15 58 58 HOH HOH . L 3 HOH E 16 68 68 HOH HOH . L 3 HOH E 17 69 69 HOH HOH . L 3 HOH E 18 71 71 HOH HOH . L 3 HOH E 19 72 72 HOH HOH . L 3 HOH E 20 82 82 HOH HOH . L 3 HOH E 21 85 85 HOH HOH . L 3 HOH E 22 89 89 HOH HOH . L 3 HOH E 23 101 101 HOH HOH . L 3 HOH E 24 113 113 HOH HOH . L 3 HOH E 25 114 114 HOH HOH . L 3 HOH E 26 120 120 HOH HOH . L 3 HOH E 27 127 127 HOH HOH . L 3 HOH E 28 129 129 HOH HOH . L 3 HOH E 29 133 133 HOH HOH . L 3 HOH E 30 136 136 HOH HOH . L 3 HOH E 31 137 137 HOH HOH . L 3 HOH E 32 138 138 HOH HOH . L 3 HOH E 33 139 139 HOH HOH . L 3 HOH E 34 143 143 HOH HOH . L 3 HOH E 35 159 159 HOH HOH . L 3 HOH E 36 167 167 HOH HOH . L 3 HOH E 37 176 176 HOH HOH . L 3 HOH E 38 177 177 HOH HOH . L 3 HOH E 39 183 183 HOH HOH . L 3 HOH E 40 184 184 HOH HOH . L 3 HOH E 41 191 191 HOH HOH . L 3 HOH E 42 194 194 HOH HOH . L 3 HOH E 43 195 195 HOH HOH . L 3 HOH E 44 202 202 HOH HOH . L 3 HOH E 45 206 206 HOH HOH . L 3 HOH E 46 213 213 HOH HOH . L 3 HOH E 47 234 234 HOH HOH . L 3 HOH E 48 237 237 HOH HOH . L 3 HOH E 49 246 246 HOH HOH . L 3 HOH E 50 247 247 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x 24.647 _atom_site.Cartn_y 2.547 _atom_site.Cartn_z -52.821 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 66.18 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 1 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #