data_3L4D
#
_model_server_result.job_id            GDTp_JnGmb2aXfNYrtkr6Q 
_model_server_result.datetime_utc      '2024-10-19 11:50:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3l4d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":490}' 
#
_entry.id    3L4D 
#
_exptl.entry_id    3L4D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              306.271 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1,2,4-TRIAZOL-1-YL)PROPAN-2-OL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.82 
_cell.angle_gamma         90 
_cell.entry_id            3L4D 
_cell.length_a            84.891 
_cell.length_b            118.509 
_cell.length_c            100.96 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3L4D 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 395 A CYS 422 1_555 E FE HEM . A HEM 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
metalc ? metalc2 E FE HEM . A HEM 481 1_555 F N5 TPF . A TPF 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.88 ? 
metalc ? metalc3 B SG CYS 395 B CYS 422 1_555 G FE HEM . B HEM 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? 
metalc ? metalc4 G FE HEM . B HEM 481 1_555 H N5 TPF . B TPF 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.881 ? 
metalc ? metalc5 C SG CYS 395 C CYS 422 1_555 I FE HEM . C HEM 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? 
metalc ? metalc6 I FE HEM . C HEM 481 1_555 J N5 TPF . C TPF 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? 
metalc ? metalc7 D SG CYS 395 D CYS 422 1_555 L FE HEM . D HEM 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? 
metalc ? metalc8 L FE HEM . D HEM 481 1_555 M N5 TPF . D TPF 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.873 ? 
#
_chem_comp.formula           'C13 H12 F2 N6 O' 
_chem_comp.formula_weight    306.271 
_chem_comp.id                TPF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1,2,4-TRIAZOL-1-YL)PROPAN-2-OL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     FLUCONAZOLE;ALPHA-(2,4-DIFLUOROPHENYL)-ALPHA-(1H-1,2,4-TRIAZOLE-1-YLMETHYL)-1H-1,2,4-TRIAZOLE-1-ETHANOL;ELAZOR;TRIFLUCAN;BIOZOLENE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O C1 TPF sing 449 n n 
O HO TPF sing 450 n n 
C1 C2 TPF sing 451 n n 
C1 C5 TPF sing 452 n n 
C1 C8 TPF sing 453 n n 
C2 N1 TPF sing 454 n n 
C2 HC21 TPF sing 455 n n 
C2 HC22 TPF sing 456 n n 
C5 N4 TPF sing 457 n n 
C5 HC51 TPF sing 458 n n 
C5 HC52 TPF sing 459 n n 
C8 C9 TPF doub 460 n y 
C8 C13 TPF sing 461 n y 
N1 C3 TPF sing 462 n y 
N1 N3 TPF sing 463 n y 
C3 N2 TPF doub 464 n y 
C3 HC3 TPF sing 465 n n 
N3 C4 TPF doub 466 n y 
N2 C4 TPF sing 467 n y 
C4 HC4 TPF sing 468 n n 
N4 C6 TPF sing 469 n y 
N4 N6 TPF sing 470 n y 
C6 N5 TPF doub 471 n y 
C6 HC6 TPF sing 472 n n 
N6 C7 TPF doub 473 n y 
N5 C7 TPF sing 474 n y 
C7 HC7 TPF sing 475 n n 
C9 C10 TPF sing 476 n y 
C9 HC9 TPF sing 477 n n 
C13 C12 TPF doub 478 n y 
C13 F2 TPF sing 479 n n 
C10 C11 TPF doub 480 n y 
C10 H10 TPF sing 481 n n 
C11 F1 TPF sing 482 n n 
C11 C12 TPF sing 483 n y 
C12 H12 TPF sing 484 n n 
#
_atom_sites.entry_id                     3L4D 
_atom_sites.fract_transf_matrix[1][1]    0.01178 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003117 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008438 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010246 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 HEM A 1 481 481 HEM HEM . 
F 3 TPF A 1 490 490 TPF TPF . 
G 2 HEM B 1 481 481 HEM HEM . 
H 3 TPF B 1 490 490 TPF TPF . 
I 2 HEM C 1 481 481 HEM HEM . 
J 3 TPF C 1 490 490 TPF TPF . 
K 4 N8E C 1 1 1 N8E N8E . 
L 2 HEM D 1 481 481 HEM HEM . 
M 3 TPF D 1 490 490 TPF TPF . 
N 5 HOH A 1 3 3 HOH HOH . 
N 5 HOH A 2 4 4 HOH HOH . 
N 5 HOH A 3 8 8 HOH HOH . 
N 5 HOH A 4 15 15 HOH HOH . 
N 5 HOH A 5 18 18 HOH HOH . 
N 5 HOH A 6 20 20 HOH HOH . 
N 5 HOH A 7 21 21 HOH HOH . 
N 5 HOH A 8 22 22 HOH HOH . 
N 5 HOH A 9 482 482 HOH HOH . 
N 5 HOH A 10 483 483 HOH HOH . 
N 5 HOH A 11 484 484 HOH HOH . 
N 5 HOH A 12 485 485 HOH HOH . 
N 5 HOH A 13 486 486 HOH HOH . 
N 5 HOH A 14 487 487 HOH HOH . 
N 5 HOH A 15 488 488 HOH HOH . 
N 5 HOH A 16 489 489 HOH HOH . 
O 5 HOH B 1 1 1 HOH HOH . 
O 5 HOH B 2 5 5 HOH HOH . 
O 5 HOH B 3 6 6 HOH HOH . 
O 5 HOH B 4 9 9 HOH HOH . 
O 5 HOH B 5 11 11 HOH HOH . 
O 5 HOH B 6 19 19 HOH HOH . 
O 5 HOH B 7 482 482 HOH HOH . 
O 5 HOH B 8 483 483 HOH HOH . 
O 5 HOH B 9 484 484 HOH HOH . 
O 5 HOH B 10 485 485 HOH HOH . 
O 5 HOH B 11 486 486 HOH HOH . 
P 5 HOH C 1 2 2 HOH HOH . 
P 5 HOH C 2 7 7 HOH HOH . 
P 5 HOH C 3 12 12 HOH HOH . 
P 5 HOH C 4 16 16 HOH HOH . 
P 5 HOH C 5 17 17 HOH HOH . 
P 5 HOH C 6 26 26 HOH HOH . 
P 5 HOH C 7 27 27 HOH HOH . 
P 5 HOH C 8 482 482 HOH HOH . 
P 5 HOH C 9 483 483 HOH HOH . 
P 5 HOH C 10 484 484 HOH HOH . 
P 5 HOH C 11 485 485 HOH HOH . 
P 5 HOH C 12 486 486 HOH HOH . 
P 5 HOH C 13 487 487 HOH HOH . 
P 5 HOH C 14 488 488 HOH HOH . 
P 5 HOH C 15 489 489 HOH HOH . 
P 5 HOH C 16 491 491 HOH HOH . 
Q 5 HOH D 1 10 10 HOH HOH . 
Q 5 HOH D 2 13 13 HOH HOH . 
Q 5 HOH D 3 14 14 HOH HOH . 
Q 5 HOH D 4 23 23 HOH HOH . 
Q 5 HOH D 5 24 24 HOH HOH . 
Q 5 HOH D 6 25 25 HOH HOH . 
Q 5 HOH D 7 482 482 HOH HOH . 
Q 5 HOH D 8 483 483 HOH HOH . 
Q 5 HOH D 9 484 484 HOH HOH . 
Q 5 HOH D 10 485 485 HOH HOH . 
Q 5 HOH D 11 486 486 HOH HOH . 
Q 5 HOH D 12 487 487 HOH HOH . 
Q 5 HOH D 13 488 488 HOH HOH . 
Q 5 HOH D 14 489 489 HOH HOH . 
Q 5 HOH D 15 491 491 HOH HOH . 
Q 5 HOH D 16 492 492 HOH HOH . 
Q 5 HOH D 17 493 493 HOH HOH . 
Q 5 HOH D 18 494 494 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O TPF . . . H 3 64.842 -32.866 -21.791 1 56.72 ? O TPF 490 B 1 
HETATM 2 C C1 TPF . . . H 3 63.965 -31.999 -21.069 1 57.32 ? C1 TPF 490 B 1 
HETATM 3 C C2 TPF . . . H 3 62.603 -32.017 -21.757 1 62.86 ? C2 TPF 490 B 1 
HETATM 4 C C5 TPF . . . H 3 63.875 -32.436 -19.611 1 50.57 ? C5 TPF 490 B 1 
HETATM 5 C C8 TPF . . . H 3 64.474 -30.59 -21.042 1 59.56 ? C8 TPF 490 B 1 
HETATM 6 N N1 TPF . . . H 3 62.031 -33.365 -21.608 1 77.35 ? N1 TPF 490 B 1 
HETATM 7 C C3 TPF . . . H 3 60.618 -33.307 -21.291 1 73.51 ? C3 TPF 490 B 1 
HETATM 8 N N3 TPF . . . H 3 62.149 -34.118 -22.795 1 77.61 ? N3 TPF 490 B 1 
HETATM 9 N N2 TPF . . . H 3 59.993 -34.021 -22.252 1 76.78 ? N2 TPF 490 B 1 
HETATM 10 C C4 TPF . . . H 3 60.899 -34.502 -23.143 1 75.24 ? C4 TPF 490 B 1 
HETATM 11 N N4 TPF . . . H 3 64.966 -33.325 -19.163 1 40.34 ? N4 TPF 490 B 1 
HETATM 12 C C6 TPF . . . H 3 66.289 -33.129 -19.756 1 41 ? C6 TPF 490 B 1 
HETATM 13 N N6 TPF . . . H 3 65.166 -33.243 -17.769 1 35.15 ? N6 TPF 490 B 1 
HETATM 14 N N5 TPF . . . H 3 67.19 -33.021 -18.738 1 31.69 ? N5 TPF 490 B 1 
HETATM 15 C C7 TPF . . . H 3 66.502 -33.079 -17.565 1 30.04 ? C7 TPF 490 B 1 
HETATM 16 C C9 TPF . . . H 3 65.341 -30.125 -22.02 1 60.32 ? C9 TPF 490 B 1 
HETATM 17 C C13 TPF . . . H 3 64.065 -29.753 -20.013 1 65 ? C13 TPF 490 B 1 
HETATM 18 C C10 TPF . . . H 3 65.796 -28.813 -21.961 1 65.79 ? C10 TPF 490 B 1 
HETATM 19 C C11 TPF . . . H 3 65.384 -27.973 -20.929 1 67.39 ? C11 TPF 490 B 1 
HETATM 20 F F1 TPF . . . H 3 65.824 -26.703 -20.872 1 70.02 ? F1 TPF 490 B 1 
HETATM 21 C C12 TPF . . . H 3 64.518 -28.443 -19.954 1 64.47 ? C12 TPF 490 B 1 
HETATM 22 F F2 TPF . . . H 3 63.221 -30.198 -19.062 1 72.4 ? F2 TPF 490 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           22 
#