data_3L4S
#
_model_server_result.job_id            7cbjlr-cqZIGhOzAE6EnoA 
_model_server_result.datetime_utc      '2024-11-01 15:39:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3l4s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":338}' 
#
_entry.id    3L4S 
#
_exptl.entry_id    3L4S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              186.057 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '3-PHOSPHOGLYCERIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          109.31 
_cell.angle_gamma         90 
_cell.entry_id            3L4S 
_cell.length_a            68.593 
_cell.length_b            102.936 
_cell.length_c            90.652 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3L4S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 H N N 
? 2 J N N 
? 2 L N N 
#
_chem_comp.formula           'C3 H7 O7 P' 
_chem_comp.formula_weight    186.057 
_chem_comp.id                3PG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '3-PHOSPHOGLYCERIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 3PG doub 1 n n 
C1 O2 3PG sing 2 n n 
C1 C2 3PG sing 3 n n 
O2 HO2 3PG sing 4 n n 
C2 O3 3PG sing 5 n n 
C2 C3 3PG sing 6 n n 
C2 H2 3PG sing 7 n n 
O3 HO3 3PG sing 8 n n 
C3 O1P 3PG sing 9 n n 
C3 H31 3PG sing 10 n n 
C3 H32 3PG sing 11 n n 
O1P P 3PG sing 12 n n 
P O2P 3PG doub 13 n n 
P O3P 3PG sing 14 n n 
P O4P 3PG sing 15 n n 
O3P HOP3 3PG sing 16 n n 
O4P HOP4 3PG sing 17 n n 
#
_atom_sites.entry_id                     3L4S 
_atom_sites.fract_transf_matrix[1][1]    0.014579 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005108 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009715 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011689 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 3PG Q 1 338 338 3PG 3PG . 
F 3 NAD Q 1 337 337 NAD NAD . 
G 3 NAD P 1 337 337 NAD NAD . 
H 2 3PG P 1 338 338 3PG 3PG . 
I 3 NAD O 1 337 337 NAD NAD . 
J 2 3PG O 1 338 338 3PG 3PG . 
K 3 NAD R 1 337 337 NAD NAD . 
L 2 3PG R 1 338 338 3PG 3PG . 
M 4 HOH Q 1 339 339 HOH HOH . 
M 4 HOH Q 2 340 340 HOH HOH . 
M 4 HOH Q 3 341 341 HOH HOH . 
M 4 HOH Q 4 342 342 HOH HOH . 
M 4 HOH Q 5 343 343 HOH HOH . 
M 4 HOH Q 6 344 344 HOH HOH . 
M 4 HOH Q 7 345 345 HOH HOH . 
M 4 HOH Q 8 346 346 HOH HOH . 
M 4 HOH Q 9 347 347 HOH HOH . 
M 4 HOH Q 10 348 348 HOH HOH . 
M 4 HOH Q 11 349 349 HOH HOH . 
M 4 HOH Q 12 350 350 HOH HOH . 
M 4 HOH Q 13 351 351 HOH HOH . 
M 4 HOH Q 14 352 352 HOH HOH . 
M 4 HOH Q 15 353 353 HOH HOH . 
M 4 HOH Q 16 354 354 HOH HOH . 
M 4 HOH Q 17 355 355 HOH HOH . 
M 4 HOH Q 18 356 356 HOH HOH . 
M 4 HOH Q 19 357 357 HOH HOH . 
M 4 HOH Q 20 358 358 HOH HOH . 
M 4 HOH Q 21 359 359 HOH HOH . 
M 4 HOH Q 22 360 360 HOH HOH . 
M 4 HOH Q 23 361 361 HOH HOH . 
M 4 HOH Q 24 362 362 HOH HOH . 
M 4 HOH Q 25 363 363 HOH HOH . 
M 4 HOH Q 26 364 364 HOH HOH . 
M 4 HOH Q 27 365 365 HOH HOH . 
M 4 HOH Q 28 366 366 HOH HOH . 
M 4 HOH Q 29 367 367 HOH HOH . 
M 4 HOH Q 30 368 368 HOH HOH . 
M 4 HOH Q 31 369 369 HOH HOH . 
M 4 HOH Q 32 370 370 HOH HOH . 
M 4 HOH Q 33 371 371 HOH HOH . 
M 4 HOH Q 34 372 372 HOH HOH . 
M 4 HOH Q 35 373 373 HOH HOH . 
M 4 HOH Q 36 374 374 HOH HOH . 
M 4 HOH Q 37 375 375 HOH HOH . 
M 4 HOH Q 38 376 376 HOH HOH . 
M 4 HOH Q 39 377 377 HOH HOH . 
M 4 HOH Q 40 378 378 HOH HOH . 
M 4 HOH Q 41 379 379 HOH HOH . 
M 4 HOH Q 42 380 380 HOH HOH . 
M 4 HOH Q 43 381 381 HOH HOH . 
M 4 HOH Q 44 382 382 HOH HOH . 
M 4 HOH Q 45 383 383 HOH HOH . 
M 4 HOH Q 46 384 384 HOH HOH . 
M 4 HOH Q 47 385 385 HOH HOH . 
M 4 HOH Q 48 386 386 HOH HOH . 
M 4 HOH Q 49 387 387 HOH HOH . 
M 4 HOH Q 50 388 388 HOH HOH . 
M 4 HOH Q 51 389 389 HOH HOH . 
M 4 HOH Q 52 390 390 HOH HOH . 
M 4 HOH Q 53 391 391 HOH HOH . 
M 4 HOH Q 54 392 392 HOH HOH . 
M 4 HOH Q 55 393 393 HOH HOH . 
M 4 HOH Q 56 394 394 HOH HOH . 
M 4 HOH Q 57 395 395 HOH HOH . 
M 4 HOH Q 58 396 396 HOH HOH . 
M 4 HOH Q 59 397 397 HOH HOH . 
M 4 HOH Q 60 398 398 HOH HOH . 
N 4 HOH P 1 339 339 HOH HOH . 
N 4 HOH P 2 340 340 HOH HOH . 
N 4 HOH P 3 341 341 HOH HOH . 
N 4 HOH P 4 342 342 HOH HOH . 
N 4 HOH P 5 343 343 HOH HOH . 
N 4 HOH P 6 344 344 HOH HOH . 
N 4 HOH P 7 345 345 HOH HOH . 
N 4 HOH P 8 346 346 HOH HOH . 
N 4 HOH P 9 347 347 HOH HOH . 
N 4 HOH P 10 348 348 HOH HOH . 
N 4 HOH P 11 349 349 HOH HOH . 
N 4 HOH P 12 350 350 HOH HOH . 
N 4 HOH P 13 351 351 HOH HOH . 
N 4 HOH P 14 352 352 HOH HOH . 
N 4 HOH P 15 353 353 HOH HOH . 
N 4 HOH P 16 354 354 HOH HOH . 
N 4 HOH P 17 355 355 HOH HOH . 
N 4 HOH P 18 356 356 HOH HOH . 
N 4 HOH P 19 357 357 HOH HOH . 
N 4 HOH P 20 358 358 HOH HOH . 
N 4 HOH P 21 359 359 HOH HOH . 
N 4 HOH P 22 360 360 HOH HOH . 
N 4 HOH P 23 361 361 HOH HOH . 
N 4 HOH P 24 362 362 HOH HOH . 
N 4 HOH P 25 363 363 HOH HOH . 
N 4 HOH P 26 364 364 HOH HOH . 
N 4 HOH P 27 365 365 HOH HOH . 
N 4 HOH P 28 366 366 HOH HOH . 
N 4 HOH P 29 367 367 HOH HOH . 
N 4 HOH P 30 368 368 HOH HOH . 
N 4 HOH P 31 369 369 HOH HOH . 
N 4 HOH P 32 370 370 HOH HOH . 
N 4 HOH P 33 371 371 HOH HOH . 
N 4 HOH P 34 372 372 HOH HOH . 
N 4 HOH P 35 373 373 HOH HOH . 
N 4 HOH P 36 374 374 HOH HOH . 
N 4 HOH P 37 375 375 HOH HOH . 
N 4 HOH P 38 376 376 HOH HOH . 
N 4 HOH P 39 377 377 HOH HOH . 
N 4 HOH P 40 378 378 HOH HOH . 
N 4 HOH P 41 379 379 HOH HOH . 
N 4 HOH P 42 380 380 HOH HOH . 
N 4 HOH P 43 381 381 HOH HOH . 
N 4 HOH P 44 382 382 HOH HOH . 
N 4 HOH P 45 383 383 HOH HOH . 
N 4 HOH P 46 384 384 HOH HOH . 
N 4 HOH P 47 385 385 HOH HOH . 
N 4 HOH P 48 386 386 HOH HOH . 
N 4 HOH P 49 387 387 HOH HOH . 
N 4 HOH P 50 388 388 HOH HOH . 
N 4 HOH P 51 389 389 HOH HOH . 
N 4 HOH P 52 390 390 HOH HOH . 
N 4 HOH P 53 391 391 HOH HOH . 
N 4 HOH P 54 392 392 HOH HOH . 
N 4 HOH P 55 393 393 HOH HOH . 
N 4 HOH P 56 394 394 HOH HOH . 
N 4 HOH P 57 395 395 HOH HOH . 
N 4 HOH P 58 396 396 HOH HOH . 
N 4 HOH P 59 397 397 HOH HOH . 
N 4 HOH P 60 398 398 HOH HOH . 
N 4 HOH P 61 399 399 HOH HOH . 
N 4 HOH P 62 400 400 HOH HOH . 
O 4 HOH O 1 339 339 HOH HOH . 
O 4 HOH O 2 340 340 HOH HOH . 
O 4 HOH O 3 341 341 HOH HOH . 
O 4 HOH O 4 342 342 HOH HOH . 
O 4 HOH O 5 343 343 HOH HOH . 
O 4 HOH O 6 344 344 HOH HOH . 
O 4 HOH O 7 345 345 HOH HOH . 
O 4 HOH O 8 346 346 HOH HOH . 
O 4 HOH O 9 347 347 HOH HOH . 
O 4 HOH O 10 348 348 HOH HOH . 
O 4 HOH O 11 349 349 HOH HOH . 
O 4 HOH O 12 350 350 HOH HOH . 
O 4 HOH O 13 351 351 HOH HOH . 
O 4 HOH O 14 352 352 HOH HOH . 
O 4 HOH O 15 353 353 HOH HOH . 
O 4 HOH O 16 354 354 HOH HOH . 
O 4 HOH O 17 355 355 HOH HOH . 
O 4 HOH O 18 356 356 HOH HOH . 
O 4 HOH O 19 357 357 HOH HOH . 
O 4 HOH O 20 358 358 HOH HOH . 
O 4 HOH O 21 359 359 HOH HOH . 
O 4 HOH O 22 360 360 HOH HOH . 
O 4 HOH O 23 361 361 HOH HOH . 
O 4 HOH O 24 362 362 HOH HOH . 
O 4 HOH O 25 363 363 HOH HOH . 
O 4 HOH O 26 364 364 HOH HOH . 
O 4 HOH O 27 365 365 HOH HOH . 
O 4 HOH O 28 366 366 HOH HOH . 
O 4 HOH O 29 367 367 HOH HOH . 
O 4 HOH O 30 368 368 HOH HOH . 
O 4 HOH O 31 369 369 HOH HOH . 
O 4 HOH O 32 370 370 HOH HOH . 
O 4 HOH O 33 371 371 HOH HOH . 
O 4 HOH O 34 372 372 HOH HOH . 
O 4 HOH O 35 373 373 HOH HOH . 
O 4 HOH O 36 374 374 HOH HOH . 
O 4 HOH O 37 375 375 HOH HOH . 
O 4 HOH O 38 376 376 HOH HOH . 
O 4 HOH O 39 377 377 HOH HOH . 
O 4 HOH O 40 378 378 HOH HOH . 
O 4 HOH O 41 379 379 HOH HOH . 
O 4 HOH O 42 380 380 HOH HOH . 
O 4 HOH O 43 381 381 HOH HOH . 
O 4 HOH O 44 382 382 HOH HOH . 
O 4 HOH O 45 383 383 HOH HOH . 
O 4 HOH O 46 384 384 HOH HOH . 
O 4 HOH O 47 385 385 HOH HOH . 
O 4 HOH O 48 386 386 HOH HOH . 
O 4 HOH O 49 387 387 HOH HOH . 
O 4 HOH O 50 388 388 HOH HOH . 
O 4 HOH O 51 389 389 HOH HOH . 
O 4 HOH O 52 390 390 HOH HOH . 
O 4 HOH O 53 391 391 HOH HOH . 
O 4 HOH O 54 392 392 HOH HOH . 
O 4 HOH O 55 393 393 HOH HOH . 
O 4 HOH O 56 394 394 HOH HOH . 
O 4 HOH O 57 395 395 HOH HOH . 
O 4 HOH O 58 396 396 HOH HOH . 
O 4 HOH O 59 397 397 HOH HOH . 
O 4 HOH O 60 398 398 HOH HOH . 
O 4 HOH O 61 399 399 HOH HOH . 
O 4 HOH O 62 400 400 HOH HOH . 
O 4 HOH O 63 401 401 HOH HOH . 
O 4 HOH O 64 402 402 HOH HOH . 
O 4 HOH O 65 403 403 HOH HOH . 
O 4 HOH O 66 404 404 HOH HOH . 
O 4 HOH O 67 405 405 HOH HOH . 
O 4 HOH O 68 406 406 HOH HOH . 
O 4 HOH O 69 407 407 HOH HOH . 
O 4 HOH O 70 408 408 HOH HOH . 
O 4 HOH O 71 409 409 HOH HOH . 
O 4 HOH O 72 410 410 HOH HOH . 
O 4 HOH O 73 411 411 HOH HOH . 
P 4 HOH R 1 339 339 HOH HOH . 
P 4 HOH R 2 340 340 HOH HOH . 
P 4 HOH R 3 341 341 HOH HOH . 
P 4 HOH R 4 342 342 HOH HOH . 
P 4 HOH R 5 343 343 HOH HOH . 
P 4 HOH R 6 344 344 HOH HOH . 
P 4 HOH R 7 345 345 HOH HOH . 
P 4 HOH R 8 346 346 HOH HOH . 
P 4 HOH R 9 347 347 HOH HOH . 
P 4 HOH R 10 348 348 HOH HOH . 
P 4 HOH R 11 349 349 HOH HOH . 
P 4 HOH R 12 350 350 HOH HOH . 
P 4 HOH R 13 351 351 HOH HOH . 
P 4 HOH R 14 352 352 HOH HOH . 
P 4 HOH R 15 353 353 HOH HOH . 
P 4 HOH R 16 354 354 HOH HOH . 
P 4 HOH R 17 355 355 HOH HOH . 
P 4 HOH R 18 356 356 HOH HOH . 
P 4 HOH R 19 357 357 HOH HOH . 
P 4 HOH R 20 358 358 HOH HOH . 
P 4 HOH R 21 359 359 HOH HOH . 
P 4 HOH R 22 360 360 HOH HOH . 
P 4 HOH R 23 361 361 HOH HOH . 
P 4 HOH R 24 362 362 HOH HOH . 
P 4 HOH R 25 363 363 HOH HOH . 
P 4 HOH R 26 364 364 HOH HOH . 
P 4 HOH R 27 365 365 HOH HOH . 
P 4 HOH R 28 366 366 HOH HOH . 
P 4 HOH R 29 367 367 HOH HOH . 
P 4 HOH R 30 368 368 HOH HOH . 
P 4 HOH R 31 369 369 HOH HOH . 
P 4 HOH R 32 370 370 HOH HOH . 
P 4 HOH R 33 371 371 HOH HOH . 
P 4 HOH R 34 372 372 HOH HOH . 
P 4 HOH R 35 373 373 HOH HOH . 
P 4 HOH R 36 374 374 HOH HOH . 
P 4 HOH R 37 375 375 HOH HOH . 
P 4 HOH R 38 376 376 HOH HOH . 
P 4 HOH R 39 377 377 HOH HOH . 
P 4 HOH R 40 378 378 HOH HOH . 
P 4 HOH R 41 379 379 HOH HOH . 
P 4 HOH R 42 380 380 HOH HOH . 
P 4 HOH R 43 381 381 HOH HOH . 
P 4 HOH R 44 382 382 HOH HOH . 
P 4 HOH R 45 383 383 HOH HOH . 
P 4 HOH R 46 384 384 HOH HOH . 
P 4 HOH R 47 385 385 HOH HOH . 
P 4 HOH R 48 386 386 HOH HOH . 
P 4 HOH R 49 387 387 HOH HOH . 
P 4 HOH R 50 388 388 HOH HOH . 
P 4 HOH R 51 389 389 HOH HOH . 
P 4 HOH R 52 390 390 HOH HOH . 
P 4 HOH R 53 391 391 HOH HOH . 
P 4 HOH R 54 392 392 HOH HOH . 
P 4 HOH R 55 393 393 HOH HOH . 
P 4 HOH R 56 394 394 HOH HOH . 
P 4 HOH R 57 395 395 HOH HOH . 
P 4 HOH R 58 396 396 HOH HOH . 
P 4 HOH R 59 397 397 HOH HOH . 
P 4 HOH R 60 398 398 HOH HOH . 
P 4 HOH R 61 399 399 HOH HOH . 
P 4 HOH R 62 400 400 HOH HOH . 
P 4 HOH R 63 401 401 HOH HOH . 
P 4 HOH R 64 402 402 HOH HOH . 
P 4 HOH R 65 403 403 HOH HOH . 
P 4 HOH R 66 404 404 HOH HOH . 
P 4 HOH R 67 405 405 HOH HOH . 
P 4 HOH R 68 406 406 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 3PG . . . H 2 -34.115 -0.73 30.356 1 41.67 ? C1 3PG 338 P 1 
HETATM 2 O O1 3PG . . . H 2 -33.357 0.248 30.193 1 37.74 ? O1 3PG 338 P 1 
HETATM 3 O O2 3PG . . . H 2 -34.66 -1.33 29.402 1 43.37 ? O2 3PG 338 P 1 
HETATM 4 C C2 3PG . . . H 2 -34.403 -1.188 31.754 1 39.88 ? C2 3PG 338 P 1 
HETATM 5 O O3 3PG . . . H 2 -33.263 -0.815 32.518 1 41.56 ? O3 3PG 338 P 1 
HETATM 6 C C3 3PG . . . H 2 -34.648 -2.699 31.875 1 33.77 ? C3 3PG 338 P 1 
HETATM 7 O O1P 3PG . . . H 2 -34.445 -3.173 33.22 1 39.18 ? O1P 3PG 338 P 1 
HETATM 8 P P 3PG . . . H 2 -35.654 -3.759 34.149 1 35.45 ? P 3PG 338 P 1 
HETATM 9 O O2P 3PG . . . H 2 -35.737 -5.22 33.74 1 28.39 ? O2P 3PG 338 P 1 
HETATM 10 O O3P 3PG . . . H 2 -35.29 -3.47 35.593 1 41.44 ? O3P 3PG 338 P 1 
HETATM 11 O O4P 3PG . . . H 2 -36.784 -2.877 33.659 1 25.24 ? O4P 3PG 338 P 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           354 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           11 
#