data_3L71
#
_model_server_result.job_id            AR4a4O6Nt-XGCaUi7jJZFw 
_model_server_result.datetime_utc      '2025-06-24 09:12:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3l71 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"MA","auth_seq_id":3001}' 
#
_entry.id    3L71 
#
_exptl.entry_id    3L71 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              403.387 
_entity.id                          13 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'METHYL (2Z)-2-(2-{[6-(2-CYANOPHENOXY)PYRIMIDIN-4-YL]OXY}PHENYL)-3-METHOXYACRYLATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3L71 
_cell.length_a            170.149 
_cell.length_b            181.312 
_cell.length_c            240.501 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3L71 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    eicosameric 
_pdbx_struct_assembly.oligomeric_count      20 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 13 Y N N 
? 13 MA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 E SG CYS 144 E CYS 144 1_555 E SG CYS 160 E CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 H SG CYS 23 H CYS 24 1_555 H SG CYS 67 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
disulf ? disulf3 H SG CYS 39 H CYS 40 1_555 H SG CYS 53 H CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
disulf ? disulf4 O SG CYS 144 R CYS 144 1_555 O SG CYS 160 R CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf5 R SG CYS 23 U CYS 24 1_555 R SG CYS 67 U CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf6 R SG CYS 39 U CYS 40 1_555 R SG CYS 53 U CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
metalc ? metalc1 C NE2 HIS 84 C HIS 84 1_555 W FE HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
metalc ? metalc2 C NE2 HIS 98 C HIS 98 1_555 X FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? 
metalc ? metalc3 C NE2 HIS 183 C HIS 183 1_555 W FE HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
metalc ? metalc4 C NE2 HIS 197 C HIS 197 1_555 X FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? 
metalc ? metalc5 D NE2 HIS 41 D HIS 41 1_555 CA FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? 
metalc ? metalc6 D SD MET 160 D MET 160 1_555 CA FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc7 E SG CYS 139 E CYS 139 1_555 GA FE1 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? 
metalc ? metalc8 E ND1 HIS 141 E HIS 141 1_555 GA FE2 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? 
metalc ? metalc9 E SG CYS 158 E CYS 158 1_555 GA FE1 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc10 E ND1 HIS 161 E HIS 161 1_555 GA FE2 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? 
metalc ? metalc11 M NE2 HIS 84 P HIS 84 1_555 JA FE HEM . P HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
metalc ? metalc12 M NE2 HIS 98 P HIS 98 1_555 KA FE HEM . P HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? 
metalc ? metalc13 M NE2 HIS 183 P HIS 183 1_555 JA FE HEM . P HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? 
metalc ? metalc14 M NE2 HIS 197 P HIS 197 1_555 KA FE HEM . P HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
metalc ? metalc15 N NE2 HIS 41 Q HIS 41 1_555 RA FE HEC . Q HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? 
metalc ? metalc16 N SD MET 160 Q MET 160 1_555 RA FE HEC . Q HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
metalc ? metalc17 O SG CYS 139 R CYS 139 1_555 VA FE1 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
metalc ? metalc18 O ND1 HIS 141 R HIS 141 1_555 VA FE2 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? 
metalc ? metalc19 O SG CYS 158 R CYS 158 1_555 VA FE1 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc20 O ND1 HIS 161 R HIS 161 1_555 VA FE2 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
#
_chem_comp.formula           'C22 H17 N3 O5' 
_chem_comp.formula_weight    403.387 
_chem_comp.id                AZO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'METHYL (2Z)-2-(2-{[6-(2-CYANOPHENOXY)PYRIMIDIN-4-YL]OXY}PHENYL)-3-METHOXYACRYLATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     AZOXYSTROBIN 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C1 AZO trip 70 n n 
C1 C2 AZO sing 71 n n 
C2 C3 AZO doub 72 n y 
C2 C7 AZO sing 73 n y 
C3 C4 AZO sing 74 n y 
C3 H3 AZO sing 75 n n 
C4 C5 AZO doub 76 n y 
C4 H4 AZO sing 77 n n 
C5 C6 AZO sing 78 n y 
C5 H5 AZO sing 79 n n 
C6 C7 AZO doub 80 n y 
C6 H6 AZO sing 81 n n 
C7 O1 AZO sing 82 n n 
O1 C8 AZO sing 83 n n 
C8 C9 AZO doub 84 n y 
C8 N2 AZO sing 85 n y 
C9 C10 AZO sing 86 n y 
C9 H9 AZO sing 87 n n 
C10 N3 AZO doub 88 n y 
C10 O2 AZO sing 89 n n 
N3 C11 AZO sing 90 n y 
C11 N2 AZO doub 91 n y 
C11 H11 AZO sing 92 n n 
O2 C12 AZO sing 93 n n 
C12 C13 AZO doub 94 n y 
C12 C17 AZO sing 95 n y 
C13 C14 AZO sing 96 n y 
C13 H13 AZO sing 97 n n 
C14 C15 AZO doub 98 n y 
C14 H14 AZO sing 99 n n 
C15 C16 AZO sing 100 n y 
C15 H15 AZO sing 101 n n 
C16 C17 AZO doub 102 n y 
C16 H16 AZO sing 103 n n 
C17 C18 AZO sing 104 n n 
C18 C19 AZO sing 105 n n 
C18 C21 AZO doub 106 e n 
C19 O3 AZO doub 107 n n 
C19 O4 AZO sing 108 n n 
O4 C20 AZO sing 109 n n 
C20 H201 AZO sing 110 n n 
C20 H202 AZO sing 111 n n 
C20 H203 AZO sing 112 n n 
C21 O5 AZO sing 113 n n 
C21 H21 AZO sing 114 n n 
O5 C22 AZO sing 115 n n 
C22 H221 AZO sing 116 n n 
C22 H222 AZO sing 117 n n 
C22 H223 AZO sing 118 n n 
#
_atom_sites.entry_id                     3L71 
_atom_sites.fract_transf_matrix[1][1]    0.005877 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005515 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004158 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
U 11 PEE A 1 2005 2005 PEE PEE . 
V 11 PEE A 1 2008 2008 PEE PEE . 
W 12 HEM C 1 501 501 HEM HEM . 
X 12 HEM C 1 502 502 HEM HEM . 
Y 13 AZO C 1 2001 2001 AZO AZO . 
Z 14 UQ C 1 2002 2002 UQ UQ . 
AA 11 PEE C 1 2007 2007 PEE PEE . 
BA 15 GOL C 1 2011 2011 GOL GOL . 
CA 16 HEC D 1 501 501 HEC HEC . 
DA 17 CDL D 1 2003 2003 CDL CDL . 
EA 18 BOG D 1 2009 2009 BOG BOG . 
FA 18 BOG D 1 2091 2091 BOG BOG . 
GA 19 FES E 1 501 501 FES FES . 
HA 17 CDL G 1 2004 2004 CDL CDL . 
IA 11 PEE N 1 3008 3008 PEE PEE . 
JA 12 HEM P 1 501 501 HEM HEM . 
KA 12 HEM P 1 502 502 HEM HEM . 
LA 18 BOG P 1 2010 2010 BOG BOG . 
MA 13 AZO P 1 3001 3001 AZO AZO . 
NA 14 UQ P 1 3002 3002 UQ UQ . 
OA 11 PEE P 1 3005 3005 PEE PEE . 
PA 11 PEE P 1 3007 3007 PEE PEE . 
QA 15 GOL P 1 3011 3011 GOL GOL . 
RA 16 HEC Q 1 501 501 HEC HEC . 
SA 17 CDL Q 1 3003 3003 CDL CDL . 
TA 18 BOG Q 1 3009 3009 BOG BOG . 
UA 18 BOG Q 1 3091 3091 BOG BOG . 
VA 19 FES R 1 501 501 FES FES . 
WA 17 CDL T 1 3004 3004 CDL CDL . 
XA 20 HOH C 1 381 2 HOH HOH . 
XA 20 HOH C 2 382 4 HOH HOH . 
XA 20 HOH C 3 383 108 HOH HOH . 
XA 20 HOH C 4 384 119 HOH HOH . 
XA 20 HOH C 5 385 168 HOH HOH . 
XA 20 HOH C 6 386 222 HOH HOH . 
XA 20 HOH C 7 1008 1008 HOH HOH . 
XA 20 HOH C 8 1238 1238 HOH HOH . 
YA 20 HOH E 1 1289 1289 HOH HOH . 
ZA 20 HOH P 1 381 1 HOH HOH . 
ZA 20 HOH P 2 382 5 HOH HOH . 
ZA 20 HOH P 3 383 6 HOH HOH . 
ZA 20 HOH P 4 384 28 HOH HOH . 
ZA 20 HOH P 5 385 35 HOH HOH . 
ZA 20 HOH P 6 386 109 HOH HOH . 
ZA 20 HOH P 7 387 214 HOH HOH . 
ZA 20 HOH P 8 959 959 HOH HOH . 
ZA 20 HOH P 9 1239 1239 HOH HOH . 
AB 20 HOH R 1 1230 1230 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 AZO . . . MA 13 51.749 141.011 86.084 1 57.55 ? N1 AZO 3001 P 1 
HETATM 2 C C1 AZO . . . MA 13 52.053 140.35 86.963 1 56.52 ? C1 AZO 3001 P 1 
HETATM 3 C C2 AZO . . . MA 13 52.402 139.548 88.093 1 55.87 ? C2 AZO 3001 P 1 
HETATM 4 C C3 AZO . . . MA 13 53.395 138.545 87.963 1 54.78 ? C3 AZO 3001 P 1 
HETATM 5 C C4 AZO . . . MA 13 53.725 137.751 89.108 1 55.01 ? C4 AZO 3001 P 1 
HETATM 6 C C5 AZO . . . MA 13 53.085 137.935 90.385 1 52.88 ? C5 AZO 3001 P 1 
HETATM 7 C C6 AZO . . . MA 13 52.086 138.922 90.562 1 54.51 ? C6 AZO 3001 P 1 
HETATM 8 C C7 AZO . . . MA 13 51.715 139.752 89.44 1 55.59 ? C7 AZO 3001 P 1 
HETATM 9 O O1 AZO . . . MA 13 50.747 140.716 89.548 1 58.52 ? O1 AZO 3001 P 1 
HETATM 10 C C8 AZO . . . MA 13 50.804 141.793 90.387 1 63.33 ? C8 AZO 3001 P 1 
HETATM 11 C C9 AZO . . . MA 13 49.713 142.687 90.365 1 65.03 ? C9 AZO 3001 P 1 
HETATM 12 C C10 AZO . . . MA 13 49.762 143.805 91.231 1 65.72 ? C10 AZO 3001 P 1 
HETATM 13 N N3 AZO . . . MA 13 50.868 143.978 92.062 1 66.28 ? N3 AZO 3001 P 1 
HETATM 14 C C11 AZO . . . MA 13 51.913 143.102 92.066 1 66.2 ? C11 AZO 3001 P 1 
HETATM 15 N N2 AZO . . . MA 13 51.873 142.023 91.232 1 65.76 ? N2 AZO 3001 P 1 
HETATM 16 O O2 AZO . . . MA 13 48.688 144.691 91.202 1 63.31 ? O2 AZO 3001 P 1 
HETATM 17 C C12 AZO . . . MA 13 48.59 145.827 91.967 1 59.9 ? C12 AZO 3001 P 1 
HETATM 18 C C13 AZO . . . MA 13 49.61 146.839 91.933 1 57.12 ? C13 AZO 3001 P 1 
HETATM 19 C C14 AZO . . . MA 13 49.485 147.995 92.721 1 56.16 ? C14 AZO 3001 P 1 
HETATM 20 C C15 AZO . . . MA 13 48.35 148.179 93.565 1 57.62 ? C15 AZO 3001 P 1 
HETATM 21 C C16 AZO . . . MA 13 47.302 147.208 93.641 1 59.32 ? C16 AZO 3001 P 1 
HETATM 22 C C17 AZO . . . MA 13 47.383 146.023 92.859 1 60.22 ? C17 AZO 3001 P 1 
HETATM 23 C C18 AZO . . . MA 13 46.279 144.993 92.914 1 62 ? C18 AZO 3001 P 1 
HETATM 24 C C19 AZO . . . MA 13 46.219 144.079 93.862 1 63.65 ? C19 AZO 3001 P 1 
HETATM 25 O O3 AZO . . . MA 13 47.065 144.033 94.754 1 67.9 ? O3 AZO 3001 P 1 
HETATM 26 O O4 AZO . . . MA 13 45.135 143.113 93.857 1 63.88 ? O4 AZO 3001 P 1 
HETATM 27 C C20 AZO . . . MA 13 45.04 142.113 94.864 1 61.2 ? C20 AZO 3001 P 1 
HETATM 28 C C21 AZO . . . MA 13 45.199 144.997 91.86 1 61.95 ? C21 AZO 3001 P 1 
HETATM 29 O O5 AZO . . . MA 13 45.349 146.011 90.903 1 63.19 ? O5 AZO 3001 P 1 
HETATM 30 C C22 AZO . . . MA 13 44.278 145.925 89.998 1 64.2 ? C22 AZO 3001 P 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    35 
_model_server_stats.query_time_ms           363 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           30 
#