data_3L74 # _model_server_result.job_id NkXry5HmvsGZJYsU78SKjw _model_server_result.datetime_utc '2024-11-12 23:18:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3l74 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"TA","auth_seq_id":3001}' # _entry.id 3L74 # _exptl.entry_id 3L74 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 374.389 _entity.id 14 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description FAMOXADONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3L74 _cell.length_a 171.893 _cell.length_b 181.687 _cell.length_c 240.75 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3L74 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details eicosameric _pdbx_struct_assembly.oligomeric_count 20 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 14 Y N N ? 14 TA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 144 E CYS 144 1_555 E SG CYS 160 E CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 H SG CYS 23 H CYS 24 1_555 H SG CYS 67 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf3 H SG CYS 39 H CYS 40 1_555 H SG CYS 53 H CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf4 O SG CYS 144 R CYS 144 1_555 O SG CYS 160 R CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf5 R SG CYS 23 U CYS 24 1_555 R SG CYS 67 U CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf6 R SG CYS 39 U CYS 40 1_555 R SG CYS 53 U CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc1 C NE2 HIS 84 C HIS 84 1_555 W FE HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc2 C NE2 HIS 98 C HIS 98 1_555 X FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc3 C NE2 HIS 183 C HIS 183 1_555 W FE HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc4 C NE2 HIS 197 C HIS 197 1_555 X FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc5 D NE2 HIS 41 D HIS 41 1_555 HA FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc6 D SD MET 160 D MET 160 1_555 HA FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc7 E SG CYS 139 E CYS 139 1_555 LA FE1 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc8 E ND1 HIS 141 E HIS 141 1_555 LA FE2 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc9 E SG CYS 158 E CYS 158 1_555 LA FE1 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc10 E ND1 HIS 161 E HIS 161 1_555 LA FE2 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc11 M NE2 HIS 84 P HIS 84 1_555 QA FE HEM . P HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc12 M NE2 HIS 98 P HIS 98 1_555 RA FE HEM . P HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc13 M NE2 HIS 183 P HIS 183 1_555 QA FE HEM . P HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc14 M NE2 HIS 197 P HIS 197 1_555 RA FE HEM . P HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc15 N NE2 HIS 41 Q HIS 41 1_555 CB FE HEC . Q HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc16 N SD MET 160 Q MET 160 1_555 CB FE HEC . Q HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc17 O SG CYS 139 R CYS 139 1_555 HB FE1 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc18 O ND1 HIS 141 R HIS 141 1_555 HB FE2 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc19 O SG CYS 158 R CYS 158 1_555 HB FE1 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc20 O ND1 HIS 161 R HIS 161 1_555 HB FE2 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? # _chem_comp.formula 'C22 H18 N2 O4' _chem_comp.formula_weight 374.389 _chem_comp.id FMX _chem_comp.mon_nstd_flag . _chem_comp.name FAMOXADONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 5-METHYL-5-(4-PHENOXYPHENYL)-3-(PHENYLAMINO)-2,4-OXAZOLIDINEDIONE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O6 C6 FMX doub 392 n n C6 N2 FMX sing 393 n n C6 C5 FMX sing 394 n n N2 N1 FMX sing 395 n n N2 C3 FMX sing 396 n n N1 C21 FMX sing 397 n n N1 HN11 FMX sing 398 n n C21 C22 FMX doub 399 n y C21 C26 FMX sing 400 n y C22 C23 FMX sing 401 n y C22 H221 FMX sing 402 n n C23 C24 FMX doub 403 n y C23 H231 FMX sing 404 n n C24 C25 FMX sing 405 n y C24 H241 FMX sing 406 n n C25 C26 FMX doub 407 n y C25 H251 FMX sing 408 n n C26 H261 FMX sing 409 n n C3 O4 FMX sing 410 n n C3 O3 FMX doub 411 n n O4 C5 FMX sing 412 n n C5 C7 FMX sing 413 n n C5 C8 FMX sing 414 n n C7 H71 FMX sing 415 n n C7 H72 FMX sing 416 n n C7 H73 FMX sing 417 n n C8 C9 FMX doub 418 n y C8 C13 FMX sing 419 n y C9 C10 FMX sing 420 n y C9 H91 FMX sing 421 n n C10 C11 FMX doub 422 n y C10 H101 FMX sing 423 n n C11 C12 FMX sing 424 n y C11 O14 FMX sing 425 n n C12 C13 FMX doub 426 n y C12 H121 FMX sing 427 n n C13 H131 FMX sing 428 n n O14 C15 FMX sing 429 n n C15 C16 FMX doub 430 n y C15 C20 FMX sing 431 n y C16 C17 FMX sing 432 n y C16 H161 FMX sing 433 n n C17 C18 FMX doub 434 n y C17 H171 FMX sing 435 n n C18 C19 FMX sing 436 n y C18 H181 FMX sing 437 n n C19 C20 FMX doub 438 n y C19 H191 FMX sing 439 n n C20 H201 FMX sing 440 n n # _atom_sites.entry_id 3L74 _atom_sites.fract_transf_matrix[1][1] 0.005818 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005504 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004154 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code U 11 PEE A 1 2005 2005 PEE PEE . V 12 UNL A 1 3015 3015 UNL UNL . W 13 HEM C 1 501 501 HEM HEM . X 13 HEM C 1 502 502 HEM HEM . Y 14 FMX C 1 2001 2001 FMX FMX . Z 15 UQ C 1 2002 2002 UQ UQ . AA 11 PEE C 1 2007 2007 PEE PEE . BA 11 PEE C 1 2008 2008 PEE PEE . CA 16 AZI C 1 2011 2011 AZI AZI . DA 12 UNL C 1 2047 2047 UNL UNL . EA 12 UNL C 1 2046 2046 UNL UNL . FA 12 UNL C 1 2048 2048 UNL UNL . GA 17 BOG C 1 3010 3010 BOG BOG . HA 18 HEC D 1 501 501 HEC HEC . IA 19 CDL D 1 2003 2003 CDL CDL . JA 17 BOG D 1 2009 2009 BOG BOG . KA 17 BOG D 1 2091 2091 BOG BOG . LA 20 FES E 1 501 501 FES FES . MA 12 UNL E 1 2012 2012 UNL UNL . NA 19 CDL G 1 2004 2004 CDL CDL . OA 11 PEE N 1 3005 3005 PEE PEE . PA 11 PEE N 1 3008 3008 PEE PEE . QA 13 HEM P 1 501 501 HEM HEM . RA 13 HEM P 1 502 502 HEM HEM . SA 17 BOG P 1 2010 2010 BOG BOG . TA 14 FMX P 1 3001 3001 FMX FMX . UA 15 UQ P 1 3002 3002 UQ UQ . VA 11 PEE P 1 3007 3007 PEE PEE . WA 16 AZI P 1 3011 3011 AZI AZI . XA 12 UNL P 1 3013 3013 UNL UNL . YA 12 UNL P 1 3014 3014 UNL UNL . ZA 12 UNL P 1 3047 3047 UNL UNL . AB 12 UNL P 1 3046 3046 UNL UNL . BB 12 UNL P 1 3048 3048 UNL UNL . CB 18 HEC Q 1 501 501 HEC HEC . DB 19 CDL Q 1 3003 3003 CDL CDL . EB 17 BOG Q 1 3009 3009 BOG BOG . FB 17 BOG Q 1 3091 3091 BOG BOG . GB 12 UNL Q 1 3012 3012 UNL UNL . HB 20 FES R 1 501 501 FES FES . IB 19 CDL T 1 3004 3004 CDL CDL . JB 21 HOH A 1 1231 1231 HOH HOH . JB 21 HOH A 2 1284 1284 HOH HOH . KB 21 HOH C 1 381 2 HOH HOH . KB 21 HOH C 2 382 45 HOH HOH . KB 21 HOH C 3 383 47 HOH HOH . KB 21 HOH C 4 384 108 HOH HOH . KB 21 HOH C 5 385 119 HOH HOH . KB 21 HOH C 6 386 168 HOH HOH . KB 21 HOH C 7 387 222 HOH HOH . KB 21 HOH C 8 1008 1008 HOH HOH . KB 21 HOH C 9 1288 1288 HOH HOH . LB 21 HOH E 1 1289 1289 HOH HOH . MB 21 HOH P 1 381 1 HOH HOH . MB 21 HOH P 2 382 5 HOH HOH . MB 21 HOH P 3 383 6 HOH HOH . MB 21 HOH P 4 384 28 HOH HOH . MB 21 HOH P 5 385 35 HOH HOH . MB 21 HOH P 6 386 55 HOH HOH . MB 21 HOH P 7 387 57 HOH HOH . MB 21 HOH P 8 388 109 HOH HOH . MB 21 HOH P 9 389 214 HOH HOH . MB 21 HOH P 10 959 959 HOH HOH . MB 21 HOH P 11 1285 1285 HOH HOH . MB 21 HOH P 12 1286 1286 HOH HOH . NB 21 HOH R 1 197 3 HOH HOH . NB 21 HOH R 2 198 4 HOH HOH . NB 21 HOH R 3 1230 1230 HOH HOH . NB 21 HOH R 4 1287 1287 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O6 FMX . . . TA 14 49.485 144.382 92.489 1 67.6 ? O6 FMX 3001 P 1 HETATM 2 C C6 FMX . . . TA 14 48.653 144.461 91.638 1 64.88 ? C6 FMX 3001 P 1 HETATM 3 N N2 FMX . . . TA 14 48.258 145.589 91.002 1 65.17 ? N2 FMX 3001 P 1 HETATM 4 N N1 FMX . . . TA 14 48.782 146.874 91.267 1 61.62 ? N1 FMX 3001 P 1 HETATM 5 C C21 FMX . . . TA 14 49.934 147.391 90.65 1 58.74 ? C21 FMX 3001 P 1 HETATM 6 C C22 FMX . . . TA 14 50.442 148.63 91.091 1 56.61 ? C22 FMX 3001 P 1 HETATM 7 C C23 FMX . . . TA 14 51.589 149.169 90.496 1 55.43 ? C23 FMX 3001 P 1 HETATM 8 C C24 FMX . . . TA 14 52.243 148.486 89.457 1 55.68 ? C24 FMX 3001 P 1 HETATM 9 C C25 FMX . . . TA 14 51.748 147.253 89.006 1 56.62 ? C25 FMX 3001 P 1 HETATM 10 C C26 FMX . . . TA 14 50.594 146.698 89.597 1 58.07 ? C26 FMX 3001 P 1 HETATM 11 C C3 FMX . . . TA 14 47.294 145.32 90.092 1 66.87 ? C3 FMX 3001 P 1 HETATM 12 O O4 FMX . . . TA 14 46.984 144.011 90.066 1 67.94 ? O4 FMX 3001 P 1 HETATM 13 O O3 FMX . . . TA 14 46.759 146.151 89.376 1 66.05 ? O3 FMX 3001 P 1 HETATM 14 C C5 FMX . . . TA 14 47.827 143.324 91.052 1 65.23 ? C5 FMX 3001 P 1 HETATM 15 C C7 FMX . . . TA 14 46.956 142.686 92.148 1 63.17 ? C7 FMX 3001 P 1 HETATM 16 C C8 FMX . . . TA 14 48.667 142.294 90.27 1 64.56 ? C8 FMX 3001 P 1 HETATM 17 C C9 FMX . . . TA 14 49.693 142.742 89.448 1 64.83 ? C9 FMX 3001 P 1 HETATM 18 C C10 FMX . . . TA 14 50.449 141.849 88.705 1 66.32 ? C10 FMX 3001 P 1 HETATM 19 C C11 FMX . . . TA 14 50.2 140.486 88.758 1 66.53 ? C11 FMX 3001 P 1 HETATM 20 C C12 FMX . . . TA 14 49.178 140.02 89.583 1 65.04 ? C12 FMX 3001 P 1 HETATM 21 C C13 FMX . . . TA 14 48.409 140.936 90.34 1 64.1 ? C13 FMX 3001 P 1 HETATM 22 O O14 FMX . . . TA 14 50.938 139.599 88.025 1 69.33 ? O14 FMX 3001 P 1 HETATM 23 C C15 FMX . . . TA 14 50.827 139.773 86.676 1 70.41 ? C15 FMX 3001 P 1 HETATM 24 C C16 FMX . . . TA 14 49.633 139.509 85.999 1 71.23 ? C16 FMX 3001 P 1 HETATM 25 C C17 FMX . . . TA 14 49.543 139.685 84.628 1 70.21 ? C17 FMX 3001 P 1 HETATM 26 C C18 FMX . . . TA 14 50.646 140.126 83.916 1 71.44 ? C18 FMX 3001 P 1 HETATM 27 C C19 FMX . . . TA 14 51.839 140.389 84.575 1 70.27 ? C19 FMX 3001 P 1 HETATM 28 C C20 FMX . . . TA 14 51.926 140.213 85.946 1 70.45 ? C20 FMX 3001 P 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 61 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #