data_3L77 # _model_server_result.job_id xtvg5nxokGZKXZxR4Se6CA _model_server_result.datetime_utc '2024-11-17 05:39:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3l77 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":241}' # _entry.id 3L77 # _exptl.entry_id 3L77 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3L77 _cell.length_a 55.62 _cell.length_b 83.23 _cell.length_c 120.75 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3L77 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -55.62 0 0 3 'crystal symmetry operation' 3_455 -x-1,y,-z -1 0 0 0 1 0 0 0 -1 -55.62 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 F N N ? 4 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 211 A CYS 210 1_555 A SG CYS 211 A CYS 210 2_455 ? B ? ? B ? ? ? ? ? ? ? 2.005 ? disulf ? disulf2 A SG CYS 211 A CYS 210 1_555 A SG CYS 211 A CYS 210 2_455 ? A ? ? A ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 341 n n O1 HO1 PG4 sing 342 n n C1 C2 PG4 sing 343 n n C1 H11 PG4 sing 344 n n C1 H12 PG4 sing 345 n n C2 O2 PG4 sing 346 n n C2 H21 PG4 sing 347 n n C2 H22 PG4 sing 348 n n O2 C3 PG4 sing 349 n n C3 C4 PG4 sing 350 n n C3 H31 PG4 sing 351 n n C3 H32 PG4 sing 352 n n C4 O3 PG4 sing 353 n n C4 H41 PG4 sing 354 n n C4 H42 PG4 sing 355 n n O3 C5 PG4 sing 356 n n C5 C6 PG4 sing 357 n n C5 H51 PG4 sing 358 n n C5 H52 PG4 sing 359 n n C6 O4 PG4 sing 360 n n C6 H61 PG4 sing 361 n n C6 H62 PG4 sing 362 n n O4 C7 PG4 sing 363 n n C7 C8 PG4 sing 364 n n C7 H71 PG4 sing 365 n n C7 H72 PG4 sing 366 n n C8 O5 PG4 sing 367 n n C8 H81 PG4 sing 368 n n C8 H82 PG4 sing 369 n n O5 HO5 PG4 sing 370 n n # _atom_sites.entry_id 3L77 _atom_sites.fract_transf_matrix[1][1] 0.017979 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012015 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008282 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NJP A 1 501 501 NJP NJP . C 3 GOL A 1 242 242 GOL GOL . D 4 PG4 A 1 241 241 PG4 PG4 . E 3 GOL A 1 243 243 GOL GOL . F 4 PG4 A 1 245 245 PG4 PG4 . G 5 EDO A 1 244 244 EDO EDO . H 3 GOL A 1 246 246 GOL GOL . I 3 GOL A 1 247 247 GOL GOL . J 3 GOL A 1 248 248 GOL GOL . K 5 EDO A 1 249 249 EDO EDO . L 5 EDO A 1 250 250 EDO EDO . M 4 PG4 A 1 251 251 PG4 PG4 . N 6 HOH A 1 252 252 HOH HOH . N 6 HOH A 2 253 253 HOH HOH . N 6 HOH A 3 254 254 HOH HOH . N 6 HOH A 4 255 255 HOH HOH . N 6 HOH A 5 256 256 HOH HOH . N 6 HOH A 6 257 257 HOH HOH . N 6 HOH A 7 258 258 HOH HOH . N 6 HOH A 8 259 259 HOH HOH . N 6 HOH A 9 260 260 HOH HOH . N 6 HOH A 10 261 261 HOH HOH . N 6 HOH A 11 262 262 HOH HOH . N 6 HOH A 12 263 263 HOH HOH . N 6 HOH A 13 264 264 HOH HOH . N 6 HOH A 14 265 265 HOH HOH . N 6 HOH A 15 266 266 HOH HOH . N 6 HOH A 16 267 267 HOH HOH . N 6 HOH A 17 268 268 HOH HOH . N 6 HOH A 18 269 269 HOH HOH . N 6 HOH A 19 270 270 HOH HOH . N 6 HOH A 20 271 271 HOH HOH . N 6 HOH A 21 272 272 HOH HOH . N 6 HOH A 22 273 273 HOH HOH . N 6 HOH A 23 274 274 HOH HOH . N 6 HOH A 24 275 275 HOH HOH . N 6 HOH A 25 276 276 HOH HOH . N 6 HOH A 26 277 277 HOH HOH . N 6 HOH A 27 278 278 HOH HOH . N 6 HOH A 28 279 279 HOH HOH . N 6 HOH A 29 280 280 HOH HOH . N 6 HOH A 30 281 281 HOH HOH . N 6 HOH A 31 282 282 HOH HOH . N 6 HOH A 32 283 283 HOH HOH . N 6 HOH A 33 284 284 HOH HOH . N 6 HOH A 34 285 285 HOH HOH . N 6 HOH A 35 286 286 HOH HOH . N 6 HOH A 36 287 287 HOH HOH . N 6 HOH A 37 288 288 HOH HOH . N 6 HOH A 38 289 289 HOH HOH . N 6 HOH A 39 290 290 HOH HOH . N 6 HOH A 40 291 291 HOH HOH . N 6 HOH A 41 292 292 HOH HOH . N 6 HOH A 42 293 293 HOH HOH . N 6 HOH A 43 294 294 HOH HOH . N 6 HOH A 44 295 295 HOH HOH . N 6 HOH A 45 296 296 HOH HOH . N 6 HOH A 46 297 297 HOH HOH . N 6 HOH A 47 298 298 HOH HOH . N 6 HOH A 48 299 299 HOH HOH . N 6 HOH A 49 300 300 HOH HOH . N 6 HOH A 50 301 301 HOH HOH . N 6 HOH A 51 302 302 HOH HOH . N 6 HOH A 52 303 303 HOH HOH . N 6 HOH A 53 304 304 HOH HOH . N 6 HOH A 54 305 305 HOH HOH . N 6 HOH A 55 306 306 HOH HOH . N 6 HOH A 56 307 307 HOH HOH . N 6 HOH A 57 308 308 HOH HOH . N 6 HOH A 58 309 309 HOH HOH . N 6 HOH A 59 310 310 HOH HOH . N 6 HOH A 60 311 311 HOH HOH . N 6 HOH A 61 312 312 HOH HOH . N 6 HOH A 62 313 313 HOH HOH . N 6 HOH A 63 314 314 HOH HOH . N 6 HOH A 64 315 315 HOH HOH . N 6 HOH A 65 316 316 HOH HOH . N 6 HOH A 66 317 317 HOH HOH . N 6 HOH A 67 318 318 HOH HOH . N 6 HOH A 68 319 319 HOH HOH . N 6 HOH A 69 320 320 HOH HOH . N 6 HOH A 70 321 321 HOH HOH . N 6 HOH A 71 322 322 HOH HOH . N 6 HOH A 72 323 323 HOH HOH . N 6 HOH A 73 324 324 HOH HOH . N 6 HOH A 74 325 325 HOH HOH . N 6 HOH A 75 326 326 HOH HOH . N 6 HOH A 76 327 327 HOH HOH . N 6 HOH A 77 328 328 HOH HOH . N 6 HOH A 78 329 329 HOH HOH . N 6 HOH A 79 330 330 HOH HOH . N 6 HOH A 80 331 331 HOH HOH . N 6 HOH A 81 332 332 HOH HOH . N 6 HOH A 82 333 333 HOH HOH . N 6 HOH A 83 334 334 HOH HOH . N 6 HOH A 84 335 335 HOH HOH . N 6 HOH A 85 336 336 HOH HOH . N 6 HOH A 86 337 337 HOH HOH . N 6 HOH A 87 338 338 HOH HOH . N 6 HOH A 88 339 339 HOH HOH . N 6 HOH A 89 340 340 HOH HOH . N 6 HOH A 90 341 341 HOH HOH . N 6 HOH A 91 342 342 HOH HOH . N 6 HOH A 92 343 343 HOH HOH . N 6 HOH A 93 344 344 HOH HOH . N 6 HOH A 94 345 345 HOH HOH . N 6 HOH A 95 346 346 HOH HOH . N 6 HOH A 96 347 347 HOH HOH . N 6 HOH A 97 348 348 HOH HOH . N 6 HOH A 98 349 349 HOH HOH . N 6 HOH A 99 350 350 HOH HOH . N 6 HOH A 100 351 351 HOH HOH . N 6 HOH A 101 352 352 HOH HOH . N 6 HOH A 102 353 353 HOH HOH . N 6 HOH A 103 354 354 HOH HOH . N 6 HOH A 104 355 355 HOH HOH . N 6 HOH A 105 356 356 HOH HOH . N 6 HOH A 106 357 357 HOH HOH . N 6 HOH A 107 358 358 HOH HOH . N 6 HOH A 108 359 359 HOH HOH . N 6 HOH A 109 360 360 HOH HOH . N 6 HOH A 110 361 361 HOH HOH . N 6 HOH A 111 362 362 HOH HOH . N 6 HOH A 112 363 363 HOH HOH . N 6 HOH A 113 364 364 HOH HOH . N 6 HOH A 114 365 365 HOH HOH . N 6 HOH A 115 366 366 HOH HOH . N 6 HOH A 116 367 367 HOH HOH . N 6 HOH A 117 368 368 HOH HOH . N 6 HOH A 118 369 369 HOH HOH . N 6 HOH A 119 370 370 HOH HOH . N 6 HOH A 120 371 371 HOH HOH . N 6 HOH A 121 372 372 HOH HOH . N 6 HOH A 122 373 373 HOH HOH . N 6 HOH A 123 374 374 HOH HOH . N 6 HOH A 124 375 375 HOH HOH . N 6 HOH A 125 376 376 HOH HOH . N 6 HOH A 126 377 377 HOH HOH . N 6 HOH A 127 378 378 HOH HOH . N 6 HOH A 128 379 379 HOH HOH . N 6 HOH A 129 380 380 HOH HOH . N 6 HOH A 130 381 381 HOH HOH . N 6 HOH A 131 382 382 HOH HOH . N 6 HOH A 132 383 383 HOH HOH . N 6 HOH A 133 384 384 HOH HOH . N 6 HOH A 134 385 385 HOH HOH . N 6 HOH A 135 386 386 HOH HOH . N 6 HOH A 136 387 387 HOH HOH . N 6 HOH A 137 388 388 HOH HOH . N 6 HOH A 138 389 389 HOH HOH . N 6 HOH A 139 390 390 HOH HOH . N 6 HOH A 140 391 391 HOH HOH . N 6 HOH A 141 392 392 HOH HOH . N 6 HOH A 142 393 393 HOH HOH . N 6 HOH A 143 394 394 HOH HOH . N 6 HOH A 144 395 395 HOH HOH . N 6 HOH A 145 396 396 HOH HOH . N 6 HOH A 146 397 397 HOH HOH . N 6 HOH A 147 398 398 HOH HOH . N 6 HOH A 148 399 399 HOH HOH . N 6 HOH A 149 400 400 HOH HOH . N 6 HOH A 150 401 401 HOH HOH . N 6 HOH A 151 402 402 HOH HOH . N 6 HOH A 152 403 403 HOH HOH . N 6 HOH A 153 404 404 HOH HOH . N 6 HOH A 154 405 405 HOH HOH . N 6 HOH A 155 406 406 HOH HOH . N 6 HOH A 156 407 407 HOH HOH . N 6 HOH A 157 408 408 HOH HOH . N 6 HOH A 158 409 409 HOH HOH . N 6 HOH A 159 410 410 HOH HOH . N 6 HOH A 160 411 411 HOH HOH . N 6 HOH A 161 412 412 HOH HOH . N 6 HOH A 162 413 413 HOH HOH . N 6 HOH A 163 414 414 HOH HOH . N 6 HOH A 164 415 415 HOH HOH . N 6 HOH A 165 416 416 HOH HOH . N 6 HOH A 166 417 417 HOH HOH . N 6 HOH A 167 418 418 HOH HOH . N 6 HOH A 168 419 419 HOH HOH . N 6 HOH A 169 420 420 HOH HOH . N 6 HOH A 170 421 421 HOH HOH . N 6 HOH A 171 422 422 HOH HOH . N 6 HOH A 172 423 423 HOH HOH . N 6 HOH A 173 424 424 HOH HOH . N 6 HOH A 174 425 425 HOH HOH . N 6 HOH A 175 426 426 HOH HOH . N 6 HOH A 176 427 427 HOH HOH . N 6 HOH A 177 428 428 HOH HOH . N 6 HOH A 178 429 429 HOH HOH . N 6 HOH A 179 430 430 HOH HOH . N 6 HOH A 180 431 431 HOH HOH . N 6 HOH A 181 432 432 HOH HOH . N 6 HOH A 182 433 433 HOH HOH . N 6 HOH A 183 434 434 HOH HOH . N 6 HOH A 184 435 435 HOH HOH . N 6 HOH A 185 436 436 HOH HOH . N 6 HOH A 186 437 437 HOH HOH . N 6 HOH A 187 438 438 HOH HOH . N 6 HOH A 188 439 439 HOH HOH . N 6 HOH A 189 440 440 HOH HOH . N 6 HOH A 190 441 441 HOH HOH . N 6 HOH A 191 442 442 HOH HOH . N 6 HOH A 192 443 443 HOH HOH . N 6 HOH A 193 444 444 HOH HOH . N 6 HOH A 194 445 445 HOH HOH . N 6 HOH A 195 446 446 HOH HOH . N 6 HOH A 196 447 447 HOH HOH . N 6 HOH A 197 448 448 HOH HOH . N 6 HOH A 198 449 449 HOH HOH . N 6 HOH A 199 450 450 HOH HOH . N 6 HOH A 200 451 451 HOH HOH . N 6 HOH A 201 452 452 HOH HOH . N 6 HOH A 202 453 453 HOH HOH . N 6 HOH A 203 454 454 HOH HOH . N 6 HOH A 204 455 455 HOH HOH . N 6 HOH A 205 456 456 HOH HOH . N 6 HOH A 206 457 457 HOH HOH . N 6 HOH A 207 458 458 HOH HOH . N 6 HOH A 208 459 459 HOH HOH . N 6 HOH A 209 460 460 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . D 4 -48.315 -15.873 -3.348 1 61.74 ? O1 PG4 241 A 1 HETATM 2 C C1 PG4 . . . D 4 -47.589 -15.559 -4.543 1 61.92 ? C1 PG4 241 A 1 HETATM 3 C C2 PG4 . . . D 4 -47.157 -14.097 -4.507 1 62.69 ? C2 PG4 241 A 1 HETATM 4 O O2 PG4 . . . D 4 -46.531 -13.752 -5.742 1 63.39 ? O2 PG4 241 A 1 HETATM 5 C C3 PG4 . . . D 4 -45.837 -12.506 -5.675 1 62.77 ? C3 PG4 241 A 1 HETATM 6 C C4 PG4 . . . D 4 -44.715 -12.484 -6.709 1 61.82 ? C4 PG4 241 A 1 HETATM 7 O O3 PG4 . . . D 4 -45.062 -13.321 -7.813 1 61.05 ? O3 PG4 241 A 1 HETATM 8 C C5 PG4 . . . D 4 -43.968 -13.509 -8.712 1 60.53 ? C5 PG4 241 A 1 HETATM 9 C C6 PG4 . . . D 4 -44.301 -14.635 -9.685 1 60.17 ? C6 PG4 241 A 1 HETATM 10 O O4 PG4 . . . D 4 -44.078 -14.202 -11.026 1 59.74 ? O4 PG4 241 A 1 HETATM 11 C C7 PG4 . . . D 4 -44.699 -15.07 -11.977 1 58.08 ? C7 PG4 241 A 1 HETATM 12 C C8 PG4 . . . D 4 -45.52 -14.242 -12.959 1 57.46 ? C8 PG4 241 A 1 HETATM 13 O O5 PG4 . . . D 4 -46.911 -14.352 -12.638 1 56.38 ? O5 PG4 241 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 361 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 13 #