data_3L7F # _model_server_result.job_id jwXRVcKbm50KFuQ0Hqdv_g _model_server_result.datetime_utc '2024-10-12 15:28:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3l7f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1002}' # _entry.id 3L7F # _exptl.entry_id 3L7F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3L7F _cell.length_a 69.64 _cell.length_b 228.16 _cell.length_c 234 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3L7F _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,K,L 1 1 C,D,M,N 2 1 E,F,I,J,O,P 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf2 A SG CYS 134 L CYS 134 1_555 A SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 97 H CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf4 B SG CYS 148 H CYS 148 1_555 B SG CYS 204 H CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 C SG CYS 23 A CYS 23 1_555 C SG CYS 88 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf6 C SG CYS 134 A CYS 134 1_555 C SG CYS 194 A CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf7 D SG CYS 22 B CYS 22 1_555 D SG CYS 97 B CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf8 D SG CYS 148 B CYS 148 1_555 D SG CYS 204 B CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf9 E SG CYS 23 D CYS 23 1_555 E SG CYS 88 D CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf10 E SG CYS 134 D CYS 134 1_555 E SG CYS 194 D CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf11 F SG CYS 22 E CYS 22 1_555 F SG CYS 97 E CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf12 F SG CYS 148 E CYS 148 1_555 F SG CYS 204 E CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? covale ? covale1 B C PCA 1 H PCA 1 1_555 B N VAL 2 H VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 D C PCA 1 B PCA 1 1_555 D N VAL 2 B VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 F C PCA 1 E PCA 1 1_555 F N VAL 2 E VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 E OD1 ASP 70 D ASP 70 1_555 J CA CA . D CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.801 ? metalc ? metalc2 O O HOH . D HOH 219 1_555 J CA CA . D CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? metalc ? metalc3 O O HOH . D HOH 232 1_555 J CA CA . D CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? metalc ? metalc4 O O HOH . D HOH 238 1_555 J CA CA . D CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.742 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 306 n n S O2 SO4 doub 307 n n S O3 SO4 sing 308 n n S O4 SO4 sing 309 n n # _atom_sites.entry_id 3L7F _atom_sites.fract_transf_matrix[1][1] 0.01436 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004383 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004274 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 SO4 L 1 1002 1002 SO4 SO4 . H 3 SO4 H 1 1001 1001 SO4 SO4 . I 3 SO4 D 1 1003 1003 SO4 SO4 . J 4 CA D 1 1004 1004 CA CA . K 5 HOH L 1 215 1 HOH HOH . K 5 HOH L 2 216 2 HOH HOH . K 5 HOH L 3 217 4 HOH HOH . K 5 HOH L 4 218 7 HOH HOH . K 5 HOH L 5 219 219 HOH HOH . K 5 HOH L 6 220 8 HOH HOH . K 5 HOH L 7 221 18 HOH HOH . K 5 HOH L 8 222 19 HOH HOH . K 5 HOH L 9 223 223 HOH HOH . K 5 HOH L 10 224 23 HOH HOH . K 5 HOH L 11 225 35 HOH HOH . K 5 HOH L 12 226 39 HOH HOH . K 5 HOH L 13 227 40 HOH HOH . K 5 HOH L 14 228 44 HOH HOH . K 5 HOH L 15 229 46 HOH HOH . K 5 HOH L 16 230 51 HOH HOH . K 5 HOH L 17 231 52 HOH HOH . K 5 HOH L 18 232 54 HOH HOH . K 5 HOH L 19 233 57 HOH HOH . K 5 HOH L 20 234 64 HOH HOH . K 5 HOH L 21 235 68 HOH HOH . K 5 HOH L 22 236 75 HOH HOH . K 5 HOH L 23 237 76 HOH HOH . K 5 HOH L 24 238 83 HOH HOH . K 5 HOH L 25 239 84 HOH HOH . K 5 HOH L 26 240 88 HOH HOH . K 5 HOH L 27 241 98 HOH HOH . K 5 HOH L 28 242 99 HOH HOH . K 5 HOH L 29 243 108 HOH HOH . K 5 HOH L 30 244 128 HOH HOH . K 5 HOH L 31 245 129 HOH HOH . K 5 HOH L 32 246 130 HOH HOH . K 5 HOH L 33 247 131 HOH HOH . K 5 HOH L 34 248 133 HOH HOH . K 5 HOH L 35 249 134 HOH HOH . K 5 HOH L 36 250 138 HOH HOH . K 5 HOH L 37 251 140 HOH HOH . K 5 HOH L 38 252 141 HOH HOH . K 5 HOH L 39 253 142 HOH HOH . K 5 HOH L 40 254 146 HOH HOH . K 5 HOH L 41 255 147 HOH HOH . K 5 HOH L 42 256 153 HOH HOH . K 5 HOH L 43 257 155 HOH HOH . K 5 HOH L 44 258 165 HOH HOH . K 5 HOH L 45 259 167 HOH HOH . K 5 HOH L 46 260 171 HOH HOH . K 5 HOH L 47 261 178 HOH HOH . K 5 HOH L 48 262 179 HOH HOH . K 5 HOH L 49 263 182 HOH HOH . K 5 HOH L 50 264 192 HOH HOH . K 5 HOH L 51 265 194 HOH HOH . K 5 HOH L 52 266 198 HOH HOH . K 5 HOH L 53 267 206 HOH HOH . K 5 HOH L 54 268 210 HOH HOH . K 5 HOH L 55 269 212 HOH HOH . K 5 HOH L 56 270 213 HOH HOH . L 5 HOH H 1 225 12 HOH HOH . L 5 HOH H 2 226 32 HOH HOH . L 5 HOH H 3 227 47 HOH HOH . L 5 HOH H 4 228 56 HOH HOH . L 5 HOH H 5 229 87 HOH HOH . L 5 HOH H 6 230 89 HOH HOH . L 5 HOH H 7 231 91 HOH HOH . L 5 HOH H 8 232 92 HOH HOH . L 5 HOH H 9 233 100 HOH HOH . L 5 HOH H 10 234 101 HOH HOH . L 5 HOH H 11 235 102 HOH HOH . L 5 HOH H 12 236 110 HOH HOH . L 5 HOH H 13 237 113 HOH HOH . L 5 HOH H 14 238 126 HOH HOH . L 5 HOH H 15 239 139 HOH HOH . L 5 HOH H 16 240 144 HOH HOH . L 5 HOH H 17 241 149 HOH HOH . L 5 HOH H 18 242 152 HOH HOH . L 5 HOH H 19 243 154 HOH HOH . L 5 HOH H 20 244 160 HOH HOH . L 5 HOH H 21 245 161 HOH HOH . L 5 HOH H 22 246 163 HOH HOH . L 5 HOH H 23 247 164 HOH HOH . L 5 HOH H 24 248 174 HOH HOH . L 5 HOH H 25 249 175 HOH HOH . L 5 HOH H 26 250 187 HOH HOH . L 5 HOH H 27 251 190 HOH HOH . L 5 HOH H 28 252 196 HOH HOH . L 5 HOH H 29 253 208 HOH HOH . L 5 HOH H 30 254 211 HOH HOH . L 5 HOH H 31 255 220 HOH HOH . M 5 HOH A 1 215 215 HOH HOH . M 5 HOH A 2 216 216 HOH HOH . M 5 HOH A 3 217 9 HOH HOH . M 5 HOH A 4 218 10 HOH HOH . M 5 HOH A 5 219 13 HOH HOH . M 5 HOH A 6 220 14 HOH HOH . M 5 HOH A 7 221 22 HOH HOH . M 5 HOH A 8 222 24 HOH HOH . M 5 HOH A 9 223 25 HOH HOH . M 5 HOH A 10 224 31 HOH HOH . M 5 HOH A 11 225 41 HOH HOH . M 5 HOH A 12 226 55 HOH HOH . M 5 HOH A 13 227 60 HOH HOH . M 5 HOH A 14 228 65 HOH HOH . M 5 HOH A 15 229 66 HOH HOH . M 5 HOH A 16 230 72 HOH HOH . M 5 HOH A 17 231 79 HOH HOH . M 5 HOH A 18 232 80 HOH HOH . M 5 HOH A 19 233 82 HOH HOH . M 5 HOH A 20 234 85 HOH HOH . M 5 HOH A 21 235 94 HOH HOH . M 5 HOH A 22 236 95 HOH HOH . M 5 HOH A 23 237 96 HOH HOH . M 5 HOH A 24 238 97 HOH HOH . M 5 HOH A 25 239 103 HOH HOH . M 5 HOH A 26 240 109 HOH HOH . M 5 HOH A 27 241 117 HOH HOH . M 5 HOH A 28 242 121 HOH HOH . M 5 HOH A 29 243 125 HOH HOH . M 5 HOH A 30 244 127 HOH HOH . M 5 HOH A 31 245 132 HOH HOH . M 5 HOH A 32 246 145 HOH HOH . M 5 HOH A 33 247 158 HOH HOH . M 5 HOH A 34 248 162 HOH HOH . M 5 HOH A 35 249 169 HOH HOH . M 5 HOH A 36 250 200 HOH HOH . M 5 HOH A 37 251 201 HOH HOH . N 5 HOH B 1 225 17 HOH HOH . N 5 HOH B 2 226 26 HOH HOH . N 5 HOH B 3 227 27 HOH HOH . N 5 HOH B 4 228 28 HOH HOH . N 5 HOH B 5 229 29 HOH HOH . N 5 HOH B 6 230 30 HOH HOH . N 5 HOH B 7 231 36 HOH HOH . N 5 HOH B 8 232 49 HOH HOH . N 5 HOH B 9 233 59 HOH HOH . N 5 HOH B 10 234 62 HOH HOH . N 5 HOH B 11 235 67 HOH HOH . N 5 HOH B 12 236 74 HOH HOH . N 5 HOH B 13 237 78 HOH HOH . N 5 HOH B 14 238 81 HOH HOH . N 5 HOH B 15 239 86 HOH HOH . N 5 HOH B 16 240 104 HOH HOH . N 5 HOH B 17 241 111 HOH HOH . N 5 HOH B 18 242 112 HOH HOH . N 5 HOH B 19 243 115 HOH HOH . N 5 HOH B 20 244 120 HOH HOH . N 5 HOH B 21 245 124 HOH HOH . N 5 HOH B 22 246 136 HOH HOH . N 5 HOH B 23 247 137 HOH HOH . N 5 HOH B 24 248 143 HOH HOH . N 5 HOH B 25 249 150 HOH HOH . N 5 HOH B 26 250 151 HOH HOH . N 5 HOH B 27 251 159 HOH HOH . N 5 HOH B 28 252 168 HOH HOH . N 5 HOH B 29 253 170 HOH HOH . N 5 HOH B 30 254 176 HOH HOH . N 5 HOH B 31 255 180 HOH HOH . N 5 HOH B 32 256 181 HOH HOH . N 5 HOH B 33 257 183 HOH HOH . N 5 HOH B 34 258 184 HOH HOH . N 5 HOH B 35 259 185 HOH HOH . N 5 HOH B 36 260 189 HOH HOH . N 5 HOH B 37 261 191 HOH HOH . N 5 HOH B 38 262 195 HOH HOH . N 5 HOH B 39 263 199 HOH HOH . N 5 HOH B 40 264 204 HOH HOH . N 5 HOH B 41 265 205 HOH HOH . N 5 HOH B 42 266 207 HOH HOH . N 5 HOH B 43 267 209 HOH HOH . N 5 HOH B 44 268 214 HOH HOH . O 5 HOH D 1 215 3 HOH HOH . O 5 HOH D 2 216 5 HOH HOH . O 5 HOH D 3 217 6 HOH HOH . O 5 HOH D 4 218 218 HOH HOH . O 5 HOH D 5 219 11 HOH HOH . O 5 HOH D 6 220 15 HOH HOH . O 5 HOH D 7 221 20 HOH HOH . O 5 HOH D 8 222 222 HOH HOH . O 5 HOH D 9 223 21 HOH HOH . O 5 HOH D 10 224 33 HOH HOH . O 5 HOH D 11 225 34 HOH HOH . O 5 HOH D 12 226 37 HOH HOH . O 5 HOH D 13 227 38 HOH HOH . O 5 HOH D 14 228 42 HOH HOH . O 5 HOH D 15 229 43 HOH HOH . O 5 HOH D 16 230 45 HOH HOH . O 5 HOH D 17 231 50 HOH HOH . O 5 HOH D 18 232 53 HOH HOH . O 5 HOH D 19 233 58 HOH HOH . O 5 HOH D 20 234 69 HOH HOH . O 5 HOH D 21 235 71 HOH HOH . O 5 HOH D 22 236 73 HOH HOH . O 5 HOH D 23 237 106 HOH HOH . O 5 HOH D 24 238 107 HOH HOH . O 5 HOH D 25 239 116 HOH HOH . O 5 HOH D 26 240 118 HOH HOH . O 5 HOH D 27 241 119 HOH HOH . O 5 HOH D 28 242 122 HOH HOH . O 5 HOH D 29 243 123 HOH HOH . O 5 HOH D 30 244 148 HOH HOH . O 5 HOH D 31 245 156 HOH HOH . O 5 HOH D 32 246 157 HOH HOH . O 5 HOH D 33 247 173 HOH HOH . O 5 HOH D 34 248 186 HOH HOH . O 5 HOH D 35 249 188 HOH HOH . O 5 HOH D 36 250 197 HOH HOH . O 5 HOH D 37 251 203 HOH HOH . P 5 HOH E 1 225 16 HOH HOH . P 5 HOH E 2 226 48 HOH HOH . P 5 HOH E 3 227 61 HOH HOH . P 5 HOH E 4 228 63 HOH HOH . P 5 HOH E 5 229 70 HOH HOH . P 5 HOH E 6 230 77 HOH HOH . P 5 HOH E 7 231 90 HOH HOH . P 5 HOH E 8 232 93 HOH HOH . P 5 HOH E 9 233 105 HOH HOH . P 5 HOH E 10 234 114 HOH HOH . P 5 HOH E 11 235 135 HOH HOH . P 5 HOH E 12 236 166 HOH HOH . P 5 HOH E 13 237 172 HOH HOH . P 5 HOH E 14 238 177 HOH HOH . P 5 HOH E 15 239 193 HOH HOH . P 5 HOH E 16 240 202 HOH HOH . P 5 HOH E 17 241 217 HOH HOH . P 5 HOH E 18 242 221 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . G 3 -15.227 -19.462 54.125 1 47.51 ? S SO4 1002 L 1 HETATM 2 O O1 SO4 . . . G 3 -16.368 -18.758 54.713 1 78.19 ? O1 SO4 1002 L 1 HETATM 3 O O2 SO4 . . . G 3 -14.452 -20.146 55.157 1 99 ? O2 SO4 1002 L 1 HETATM 4 O O3 SO4 . . . G 3 -15.756 -20.446 53.177 1 75.69 ? O3 SO4 1002 L 1 HETATM 5 O O4 SO4 . . . G 3 -14.309 -18.56 53.434 1 99 ? O4 SO4 1002 L 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #