data_3L7K # _model_server_result.job_id 5ptoxxzIECkceZnFOQ2VoQ _model_server_result.datetime_utc '2024-11-17 08:21:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3l7k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"JA","auth_seq_id":735}' # _entry.id 3L7K # _exptl.entry_id 3L7K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 292.243 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3L7K _cell.length_a 222.04 _cell.length_b 222.04 _cell.length_c 100.91 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3L7K _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA 1 1 A,B,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,KA,LA 2 1 C,D,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,MA,NA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 N N N ? 4 JA N N # _chem_comp.formula 'C10 H16 N2 O8' _chem_comp.formula_weight 292.243 _chem_comp.id EDT _chem_comp.mon_nstd_flag . _chem_comp.name '{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O20 C5 EDT sing 144 n n O20 H20 EDT sing 145 n n C5 O19 EDT doub 146 n n C5 C4 EDT sing 147 n n C4 N3 EDT sing 148 n n C4 H041 EDT sing 149 n n C4 H042 EDT sing 150 n n N3 C2 EDT sing 151 n n N3 C6 EDT sing 152 n n C2 C1 EDT sing 153 n n C2 H021 EDT sing 154 n n C2 H022 EDT sing 155 n n C1 O18 EDT doub 156 n n C1 O17 EDT sing 157 n n O17 H17 EDT sing 158 n n C6 C7 EDT sing 159 n n C6 H061 EDT sing 160 n n C6 H062 EDT sing 161 n n C7 N8 EDT sing 162 n n C7 H071 EDT sing 163 n n C7 H072 EDT sing 164 n n N8 C9 EDT sing 165 n n N8 C11 EDT sing 166 n n C9 C10 EDT sing 167 n n C9 H091 EDT sing 168 n n C9 H092 EDT sing 169 n n C10 O16 EDT sing 170 n n C10 O15 EDT doub 171 n n O16 H16 EDT sing 172 n n C11 C12 EDT sing 173 n n C11 H111 EDT sing 174 n n C11 H112 EDT sing 175 n n C12 O13 EDT doub 176 n n C12 O14 EDT sing 177 n n O14 H14 EDT sing 178 n n # _atom_sites.entry_id 3L7K _atom_sites.fract_transf_matrix[1][1] 0.004504 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004504 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00991 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 A 1 730 1 SO4 SO4 . F 2 SO4 A 1 731 2 SO4 SO4 . G 2 SO4 A 1 732 7 SO4 SO4 . H 3 CL A 1 733 6 CL CL . I 3 CL A 1 734 14 CL CL . J 3 CL A 1 735 16 CL CL . K 3 CL A 1 736 20 CL CL . L 3 CL A 1 737 22 CL CL . M 3 CL A 1 738 23 CL CL . N 4 EDT A 1 739 2 EDT EDT . O 3 CL A 1 740 1 CL CL . P 3 CL A 1 741 1 CL CL . Q 3 CL A 1 742 1 CL CL . R 2 SO4 B 1 730 8 SO4 SO4 . S 3 CL B 1 731 1 CL CL . T 3 CL B 1 732 2 CL CL . U 3 CL B 1 733 7 CL CL . V 3 CL B 1 734 17 CL CL . W 3 CL B 1 735 24 CL CL . X 3 CL B 1 736 1 CL CL . Y 2 SO4 C 1 730 6 SO4 SO4 . Z 3 CL C 1 731 4 CL CL . AA 3 CL C 1 732 8 CL CL . BA 3 CL C 1 733 12 CL CL . CA 3 CL C 1 734 19 CL CL . DA 3 CL C 1 735 21 CL CL . EA 5 C2G D 1 730 130 C2G C2G . FA 2 SO4 D 1 731 5 SO4 SO4 . GA 3 CL D 1 732 5 CL CL . HA 3 CL D 1 733 9 CL CL . IA 6 EDO D 1 734 1 EDO EDO . JA 4 EDT D 1 735 1 EDT EDT . KA 7 HOH A 1 743 6 HOH HOH . LA 7 HOH B 1 737 3 HOH HOH . LA 7 HOH B 2 738 4 HOH HOH . LA 7 HOH B 3 739 7 HOH HOH . MA 7 HOH C 1 736 5 HOH HOH . MA 7 HOH C 2 737 8 HOH HOH . NA 7 HOH D 1 736 1 HOH HOH . NA 7 HOH D 2 737 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O20 EDT . . . JA 4 -100.878 53.872 14.665 1 170.05 ? O20 EDT 735 D 1 HETATM 2 C C5 EDT . . . JA 4 -100.23 53.298 13.562 1 170.05 ? C5 EDT 735 D 1 HETATM 3 O O19 EDT . . . JA 4 -100.646 52.27 13.137 1 170.05 ? O19 EDT 735 D 1 HETATM 4 C C4 EDT . . . JA 4 -99.328 54.154 12.658 1 170.05 ? C4 EDT 735 D 1 HETATM 5 N N3 EDT . . . JA 4 -98.393 55.037 13.386 1 170.05 ? N3 EDT 735 D 1 HETATM 6 C C2 EDT . . . JA 4 -97.091 55.186 12.722 1 170.05 ? C2 EDT 735 D 1 HETATM 7 C C1 EDT . . . JA 4 -96.955 54.264 11.501 1 170.05 ? C1 EDT 735 D 1 HETATM 8 O O18 EDT . . . JA 4 -97.676 54.383 10.558 1 170.05 ? O18 EDT 735 D 1 HETATM 9 O O17 EDT . . . JA 4 -95.737 53.586 11.343 1 170.05 ? O17 EDT 735 D 1 HETATM 10 C C6 EDT . . . JA 4 -98.202 54.598 14.768 1 170.05 ? C6 EDT 735 D 1 HETATM 11 C C7 EDT . . . JA 4 -96.895 53.814 14.992 1 170.05 ? C7 EDT 735 D 1 HETATM 12 N N8 EDT . . . JA 4 -97.083 52.412 14.576 1 170.05 ? N8 EDT 735 D 1 HETATM 13 C C9 EDT . . . JA 4 -97.795 51.573 15.564 1 170.05 ? C9 EDT 735 D 1 HETATM 14 C C10 EDT . . . JA 4 -98.24 52.319 16.839 1 170.05 ? C10 EDT 735 D 1 HETATM 15 O O16 EDT . . . JA 4 -99.615 52.403 17.147 1 170.05 ? O16 EDT 735 D 1 HETATM 16 O O15 EDT . . . JA 4 -97.442 52.501 17.704 1 170.05 ? O15 EDT 735 D 1 HETATM 17 C C11 EDT . . . JA 4 -95.796 51.819 14.198 1 170.05 ? C11 EDT 735 D 1 HETATM 18 C C12 EDT . . . JA 4 -95.741 50.368 14.68 1 170.05 ? C12 EDT 735 D 1 HETATM 19 O O13 EDT . . . JA 4 -96.22 49.491 14.037 1 170.05 ? O13 EDT 735 D 1 HETATM 20 O O14 EDT . . . JA 4 -95.233 50.112 15.957 1 170.05 ? O14 EDT 735 D 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 142 _model_server_stats.query_time_ms 453 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 20 #