data_3L7M # _model_server_result.job_id p4HGCL8Ys8f5mmpX4odGxQ _model_server_result.datetime_utc '2024-11-17 10:33:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3l7m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":738}' # _entry.id 3L7M # _exptl.entry_id 3L7M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 292.243 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3L7M _cell.length_a 223.51 _cell.length_b 223.51 _cell.length_c 101.76 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3L7M _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA 1 1 A,B,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,GA,HA 2 1 C,D,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,IA,JA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 M N N ? 4 EA N N # _chem_comp.formula 'C10 H16 N2 O8' _chem_comp.formula_weight 292.243 _chem_comp.id EDT _chem_comp.mon_nstd_flag . _chem_comp.name '{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O20 C5 EDT sing 83 n n O20 H20 EDT sing 84 n n C5 O19 EDT doub 85 n n C5 C4 EDT sing 86 n n C4 N3 EDT sing 87 n n C4 H041 EDT sing 88 n n C4 H042 EDT sing 89 n n N3 C2 EDT sing 90 n n N3 C6 EDT sing 91 n n C2 C1 EDT sing 92 n n C2 H021 EDT sing 93 n n C2 H022 EDT sing 94 n n C1 O18 EDT doub 95 n n C1 O17 EDT sing 96 n n O17 H17 EDT sing 97 n n C6 C7 EDT sing 98 n n C6 H061 EDT sing 99 n n C6 H062 EDT sing 100 n n C7 N8 EDT sing 101 n n C7 H071 EDT sing 102 n n C7 H072 EDT sing 103 n n N8 C9 EDT sing 104 n n N8 C11 EDT sing 105 n n C9 C10 EDT sing 106 n n C9 H091 EDT sing 107 n n C9 H092 EDT sing 108 n n C10 O16 EDT sing 109 n n C10 O15 EDT doub 110 n n O16 H16 EDT sing 111 n n C11 C12 EDT sing 112 n n C11 H111 EDT sing 113 n n C11 H112 EDT sing 114 n n C12 O13 EDT doub 115 n n C12 O14 EDT sing 116 n n O14 H14 EDT sing 117 n n # _atom_sites.entry_id 3L7M _atom_sites.fract_transf_matrix[1][1] 0.004474 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004474 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009827 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PO4 A 1 730 1 PO4 PO4 . F 2 PO4 A 1 731 6 PO4 PO4 . G 3 CL A 1 732 3 CL CL . H 3 CL A 1 733 10 CL CL . I 3 CL A 1 734 11 CL CL . J 3 CL A 1 735 13 CL CL . K 3 CL A 1 736 20 CL CL . L 3 CL A 1 737 23 CL CL . M 4 EDT A 1 738 1 EDT EDT . N 2 PO4 B 1 730 2 PO4 PO4 . O 2 PO4 B 1 731 5 PO4 PO4 . P 3 CL B 1 732 1 CL CL . Q 3 CL B 1 733 2 CL CL . R 3 CL B 1 734 7 CL CL . S 3 CL B 1 735 17 CL CL . T 3 CL B 1 736 24 CL CL . U 3 CL B 1 737 1 CL CL . V 2 PO4 C 1 730 3 PO4 PO4 . W 2 PO4 C 1 731 8 PO4 PO4 . X 3 CL C 1 732 4 CL CL . Y 3 CL C 1 733 16 CL CL . Z 2 PO4 D 1 730 4 PO4 PO4 . AA 2 PO4 D 1 731 7 PO4 PO4 . BA 3 CL D 1 732 5 CL CL . CA 3 CL D 1 733 9 CL CL . DA 3 CL D 1 734 15 CL CL . EA 4 EDT D 1 735 1 EDT EDT . FA 3 CL D 1 736 1 CL CL . GA 5 HOH A 1 739 17 HOH HOH . HA 5 HOH B 1 738 1 HOH HOH . HA 5 HOH B 2 739 2 HOH HOH . HA 5 HOH B 3 740 9 HOH HOH . HA 5 HOH B 4 741 11 HOH HOH . IA 5 HOH C 1 734 12 HOH HOH . JA 5 HOH D 1 737 10 HOH HOH . JA 5 HOH D 2 738 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O20 EDT . . . M 4 -117.967 58.22 15.891 1 134.3 ? O20 EDT 738 A 1 HETATM 2 C C5 EDT . . . M 4 -118.138 58.704 14.587 1 134.3 ? C5 EDT 738 A 1 HETATM 3 O O19 EDT . . . M 4 -118.24 59.878 14.417 1 134.3 ? O19 EDT 738 A 1 HETATM 4 C C4 EDT . . . M 4 -118.511 57.716 13.47 1 134.3 ? C4 EDT 738 A 1 HETATM 5 N N3 EDT . . . M 4 -119.932 57.345 13.585 1 134.3 ? N3 EDT 738 A 1 HETATM 6 C C2 EDT . . . M 4 -120.616 57.342 12.284 1 134.3 ? C2 EDT 738 A 1 HETATM 7 C C1 EDT . . . M 4 -121.972 56.624 12.406 1 134.3 ? C1 EDT 738 A 1 HETATM 8 O O18 EDT . . . M 4 -122.879 56.979 11.73 1 134.3 ? O18 EDT 738 A 1 HETATM 9 O O17 EDT . . . M 4 -122.229 55.812 13.521 1 134.3 ? O17 EDT 738 A 1 HETATM 10 C C6 EDT . . . M 4 -120.612 58.227 14.545 1 134.3 ? C6 EDT 738 A 1 HETATM 11 C C7 EDT . . . M 4 -121.776 59.029 13.925 1 134.3 ? C7 EDT 738 A 1 HETATM 12 N N8 EDT . . . M 4 -121.719 60.448 14.327 1 134.3 ? N8 EDT 738 A 1 HETATM 13 C C9 EDT . . . M 4 -121.555 60.626 15.779 1 134.3 ? C9 EDT 738 A 1 HETATM 14 C C10 EDT . . . M 4 -122.118 59.468 16.616 1 134.3 ? C10 EDT 738 A 1 HETATM 15 O O16 EDT . . . M 4 -121.329 58.933 17.651 1 134.3 ? O16 EDT 738 A 1 HETATM 16 O O15 EDT . . . M 4 -123.182 59.004 16.369 1 134.3 ? O15 EDT 738 A 1 HETATM 17 C C11 EDT . . . M 4 -122.879 61.213 13.82 1 134.3 ? C11 EDT 738 A 1 HETATM 18 C C12 EDT . . . M 4 -122.765 62.72 14.138 1 134.3 ? C12 EDT 738 A 1 HETATM 19 O O13 EDT . . . M 4 -122.318 63.482 13.334 1 134.3 ? O13 EDT 738 A 1 HETATM 20 O O14 EDT . . . M 4 -123.53 63.24 15.193 1 134.3 ? O14 EDT 738 A 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 216 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 20 #