data_3L7U # _model_server_result.job_id U0nd-01qEetLgB-p6Iid2g _model_server_result.datetime_utc '2024-12-31 04:49:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3l7u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":153}' # _entry.id 3L7U # _exptl.entry_id 3L7U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3L7U _cell.length_a 154.51 _cell.length_b 154.51 _cell.length_c 111.821 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3L7U _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 3L7U _atom_sites.fract_transf_matrix[1][1] 0.006476 _atom_sites.fract_transf_matrix[1][2] 0.003739 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007478 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008954 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 PO4 B 1 153 1 PO4 PO4 . E 2 PO4 B 1 154 2 PO4 PO4 . F 3 HOH A 1 153 153 HOH HOH . F 3 HOH A 2 154 154 HOH HOH . F 3 HOH A 3 155 155 HOH HOH . F 3 HOH A 4 156 156 HOH HOH . F 3 HOH A 5 157 157 HOH HOH . F 3 HOH A 6 158 158 HOH HOH . F 3 HOH A 7 159 159 HOH HOH . F 3 HOH A 8 160 160 HOH HOH . F 3 HOH A 9 161 161 HOH HOH . F 3 HOH A 10 162 162 HOH HOH . F 3 HOH A 11 163 163 HOH HOH . F 3 HOH A 12 164 164 HOH HOH . F 3 HOH A 13 165 165 HOH HOH . F 3 HOH A 14 166 166 HOH HOH . F 3 HOH A 15 167 167 HOH HOH . F 3 HOH A 16 168 168 HOH HOH . F 3 HOH A 17 169 187 HOH HOH . F 3 HOH A 18 170 170 HOH HOH . F 3 HOH A 19 171 171 HOH HOH . F 3 HOH A 20 172 172 HOH HOH . F 3 HOH A 21 173 173 HOH HOH . F 3 HOH A 22 174 189 HOH HOH . F 3 HOH A 23 175 175 HOH HOH . F 3 HOH A 24 176 176 HOH HOH . F 3 HOH A 25 177 177 HOH HOH . F 3 HOH A 26 178 178 HOH HOH . F 3 HOH A 27 179 179 HOH HOH . F 3 HOH A 28 180 180 HOH HOH . F 3 HOH A 29 181 181 HOH HOH . F 3 HOH A 30 182 182 HOH HOH . F 3 HOH A 31 183 183 HOH HOH . F 3 HOH A 32 184 184 HOH HOH . F 3 HOH A 33 185 185 HOH HOH . F 3 HOH A 34 186 186 HOH HOH . F 3 HOH A 35 187 187 HOH HOH . F 3 HOH A 36 188 188 HOH HOH . F 3 HOH A 37 189 189 HOH HOH . F 3 HOH A 38 190 190 HOH HOH . F 3 HOH A 39 191 191 HOH HOH . F 3 HOH A 40 192 192 HOH HOH . F 3 HOH A 41 193 193 HOH HOH . F 3 HOH A 42 194 194 HOH HOH . F 3 HOH A 43 195 195 HOH HOH . F 3 HOH A 44 196 196 HOH HOH . F 3 HOH A 45 197 197 HOH HOH . F 3 HOH A 46 198 212 HOH HOH . F 3 HOH A 47 199 199 HOH HOH . F 3 HOH A 48 200 200 HOH HOH . F 3 HOH A 49 201 201 HOH HOH . F 3 HOH A 50 202 202 HOH HOH . F 3 HOH A 51 203 203 HOH HOH . F 3 HOH A 52 204 204 HOH HOH . F 3 HOH A 53 205 205 HOH HOH . F 3 HOH A 54 206 206 HOH HOH . F 3 HOH A 55 207 207 HOH HOH . F 3 HOH A 56 208 208 HOH HOH . F 3 HOH A 57 209 209 HOH HOH . F 3 HOH A 58 210 210 HOH HOH . F 3 HOH A 59 211 211 HOH HOH . F 3 HOH A 60 212 212 HOH HOH . F 3 HOH A 61 213 213 HOH HOH . F 3 HOH A 62 214 214 HOH HOH . F 3 HOH A 63 215 215 HOH HOH . F 3 HOH A 64 216 216 HOH HOH . F 3 HOH A 65 217 217 HOH HOH . F 3 HOH A 66 218 218 HOH HOH . F 3 HOH A 67 219 219 HOH HOH . F 3 HOH A 68 220 220 HOH HOH . F 3 HOH A 69 221 221 HOH HOH . F 3 HOH A 70 222 222 HOH HOH . F 3 HOH A 71 223 223 HOH HOH . F 3 HOH A 72 224 173 HOH HOH . F 3 HOH A 73 227 227 HOH HOH . F 3 HOH A 74 249 249 HOH HOH . F 3 HOH A 75 268 268 HOH HOH . F 3 HOH A 76 276 276 HOH HOH . F 3 HOH A 77 278 278 HOH HOH . F 3 HOH A 78 292 292 HOH HOH . F 3 HOH A 79 294 294 HOH HOH . F 3 HOH A 80 296 296 HOH HOH . F 3 HOH A 81 298 298 HOH HOH . F 3 HOH A 82 299 299 HOH HOH . F 3 HOH A 83 305 305 HOH HOH . F 3 HOH A 84 314 314 HOH HOH . F 3 HOH A 85 315 315 HOH HOH . F 3 HOH A 86 322 322 HOH HOH . F 3 HOH A 87 347 347 HOH HOH . F 3 HOH A 88 350 350 HOH HOH . F 3 HOH A 89 355 355 HOH HOH . F 3 HOH A 90 363 363 HOH HOH . F 3 HOH A 91 364 364 HOH HOH . F 3 HOH A 92 375 375 HOH HOH . F 3 HOH A 93 376 376 HOH HOH . F 3 HOH A 94 377 377 HOH HOH . F 3 HOH A 95 380 380 HOH HOH . F 3 HOH A 96 384 384 HOH HOH . F 3 HOH A 97 385 385 HOH HOH . F 3 HOH A 98 386 386 HOH HOH . F 3 HOH A 99 387 387 HOH HOH . G 3 HOH B 1 155 155 HOH HOH . G 3 HOH B 2 156 156 HOH HOH . G 3 HOH B 3 157 157 HOH HOH . G 3 HOH B 4 158 158 HOH HOH . G 3 HOH B 5 159 159 HOH HOH . G 3 HOH B 6 160 160 HOH HOH . G 3 HOH B 7 161 161 HOH HOH . G 3 HOH B 8 162 162 HOH HOH . G 3 HOH B 9 163 163 HOH HOH . G 3 HOH B 10 164 164 HOH HOH . G 3 HOH B 11 165 165 HOH HOH . G 3 HOH B 12 166 166 HOH HOH . G 3 HOH B 13 167 167 HOH HOH . G 3 HOH B 14 168 168 HOH HOH . G 3 HOH B 15 169 169 HOH HOH . G 3 HOH B 16 170 170 HOH HOH . G 3 HOH B 17 171 171 HOH HOH . G 3 HOH B 18 172 172 HOH HOH . G 3 HOH B 19 173 173 HOH HOH . G 3 HOH B 20 174 174 HOH HOH . G 3 HOH B 21 175 175 HOH HOH . G 3 HOH B 22 176 176 HOH HOH . G 3 HOH B 23 177 153 HOH HOH . G 3 HOH B 24 178 178 HOH HOH . G 3 HOH B 25 179 179 HOH HOH . G 3 HOH B 26 180 180 HOH HOH . G 3 HOH B 27 181 181 HOH HOH . G 3 HOH B 28 182 182 HOH HOH . G 3 HOH B 29 183 183 HOH HOH . G 3 HOH B 30 184 184 HOH HOH . G 3 HOH B 31 185 185 HOH HOH . G 3 HOH B 32 186 186 HOH HOH . G 3 HOH B 33 187 154 HOH HOH . G 3 HOH B 34 188 188 HOH HOH . G 3 HOH B 35 189 169 HOH HOH . G 3 HOH B 36 190 190 HOH HOH . G 3 HOH B 37 191 191 HOH HOH . G 3 HOH B 38 192 192 HOH HOH . G 3 HOH B 39 193 198 HOH HOH . G 3 HOH B 40 194 194 HOH HOH . G 3 HOH B 41 195 195 HOH HOH . G 3 HOH B 42 196 196 HOH HOH . G 3 HOH B 43 197 197 HOH HOH . G 3 HOH B 44 198 198 HOH HOH . G 3 HOH B 45 199 199 HOH HOH . G 3 HOH B 46 200 200 HOH HOH . G 3 HOH B 47 201 201 HOH HOH . G 3 HOH B 48 202 202 HOH HOH . G 3 HOH B 49 203 203 HOH HOH . G 3 HOH B 50 221 221 HOH HOH . G 3 HOH B 51 224 224 HOH HOH . G 3 HOH B 52 226 226 HOH HOH . G 3 HOH B 53 237 237 HOH HOH . G 3 HOH B 54 238 238 HOH HOH . G 3 HOH B 55 240 240 HOH HOH . G 3 HOH B 56 242 242 HOH HOH . G 3 HOH B 57 245 245 HOH HOH . G 3 HOH B 58 252 252 HOH HOH . G 3 HOH B 59 257 257 HOH HOH . G 3 HOH B 60 260 260 HOH HOH . G 3 HOH B 61 266 266 HOH HOH . G 3 HOH B 62 274 274 HOH HOH . G 3 HOH B 63 277 277 HOH HOH . G 3 HOH B 64 280 280 HOH HOH . G 3 HOH B 65 281 281 HOH HOH . G 3 HOH B 66 283 283 HOH HOH . G 3 HOH B 67 287 287 HOH HOH . G 3 HOH B 68 291 291 HOH HOH . G 3 HOH B 69 295 295 HOH HOH . G 3 HOH B 70 297 297 HOH HOH . G 3 HOH B 71 301 301 HOH HOH . G 3 HOH B 72 302 302 HOH HOH . G 3 HOH B 73 307 307 HOH HOH . G 3 HOH B 74 308 308 HOH HOH . G 3 HOH B 75 310 310 HOH HOH . G 3 HOH B 76 311 311 HOH HOH . G 3 HOH B 77 316 316 HOH HOH . G 3 HOH B 78 317 317 HOH HOH . G 3 HOH B 79 328 328 HOH HOH . G 3 HOH B 80 329 329 HOH HOH . G 3 HOH B 81 332 332 HOH HOH . G 3 HOH B 82 336 336 HOH HOH . G 3 HOH B 83 343 343 HOH HOH . G 3 HOH B 84 356 356 HOH HOH . G 3 HOH B 85 357 357 HOH HOH . G 3 HOH B 86 362 362 HOH HOH . G 3 HOH B 87 365 365 HOH HOH . G 3 HOH B 88 366 366 HOH HOH . G 3 HOH B 89 369 369 HOH HOH . G 3 HOH B 90 371 371 HOH HOH . G 3 HOH B 91 374 374 HOH HOH . G 3 HOH B 92 378 378 HOH HOH . H 3 HOH C 1 153 153 HOH HOH . H 3 HOH C 2 154 154 HOH HOH . H 3 HOH C 3 155 155 HOH HOH . H 3 HOH C 4 156 156 HOH HOH . H 3 HOH C 5 157 157 HOH HOH . H 3 HOH C 6 158 158 HOH HOH . H 3 HOH C 7 159 159 HOH HOH . H 3 HOH C 8 160 160 HOH HOH . H 3 HOH C 9 161 161 HOH HOH . H 3 HOH C 10 162 162 HOH HOH . H 3 HOH C 11 163 163 HOH HOH . H 3 HOH C 12 164 164 HOH HOH . H 3 HOH C 13 165 165 HOH HOH . H 3 HOH C 14 166 166 HOH HOH . H 3 HOH C 15 167 167 HOH HOH . H 3 HOH C 16 168 168 HOH HOH . H 3 HOH C 17 169 169 HOH HOH . H 3 HOH C 18 170 170 HOH HOH . H 3 HOH C 19 171 171 HOH HOH . H 3 HOH C 20 172 172 HOH HOH . H 3 HOH C 21 174 174 HOH HOH . H 3 HOH C 22 175 175 HOH HOH . H 3 HOH C 23 176 176 HOH HOH . H 3 HOH C 24 177 177 HOH HOH . H 3 HOH C 25 178 178 HOH HOH . H 3 HOH C 26 179 179 HOH HOH . H 3 HOH C 27 180 180 HOH HOH . H 3 HOH C 28 181 181 HOH HOH . H 3 HOH C 29 182 182 HOH HOH . H 3 HOH C 30 183 183 HOH HOH . H 3 HOH C 31 184 184 HOH HOH . H 3 HOH C 32 185 185 HOH HOH . H 3 HOH C 33 186 186 HOH HOH . H 3 HOH C 34 187 187 HOH HOH . H 3 HOH C 35 188 188 HOH HOH . H 3 HOH C 36 189 189 HOH HOH . H 3 HOH C 37 190 190 HOH HOH . H 3 HOH C 38 191 191 HOH HOH . H 3 HOH C 39 192 192 HOH HOH . H 3 HOH C 40 193 193 HOH HOH . H 3 HOH C 41 194 194 HOH HOH . H 3 HOH C 42 195 195 HOH HOH . H 3 HOH C 43 196 196 HOH HOH . H 3 HOH C 44 197 197 HOH HOH . H 3 HOH C 45 198 198 HOH HOH . H 3 HOH C 46 199 199 HOH HOH . H 3 HOH C 47 200 200 HOH HOH . H 3 HOH C 48 201 201 HOH HOH . H 3 HOH C 49 202 202 HOH HOH . H 3 HOH C 50 203 203 HOH HOH . H 3 HOH C 51 204 204 HOH HOH . H 3 HOH C 52 205 205 HOH HOH . H 3 HOH C 53 206 206 HOH HOH . H 3 HOH C 54 207 207 HOH HOH . H 3 HOH C 55 208 208 HOH HOH . H 3 HOH C 56 209 209 HOH HOH . H 3 HOH C 57 210 210 HOH HOH . H 3 HOH C 58 211 211 HOH HOH . H 3 HOH C 59 212 212 HOH HOH . H 3 HOH C 60 213 213 HOH HOH . H 3 HOH C 61 214 214 HOH HOH . H 3 HOH C 62 215 215 HOH HOH . H 3 HOH C 63 216 174 HOH HOH . H 3 HOH C 64 217 177 HOH HOH . H 3 HOH C 65 218 193 HOH HOH . H 3 HOH C 66 222 222 HOH HOH . H 3 HOH C 67 228 228 HOH HOH . H 3 HOH C 68 232 232 HOH HOH . H 3 HOH C 69 241 241 HOH HOH . H 3 HOH C 70 243 243 HOH HOH . H 3 HOH C 71 251 251 HOH HOH . H 3 HOH C 72 253 253 HOH HOH . H 3 HOH C 73 255 255 HOH HOH . H 3 HOH C 74 261 261 HOH HOH . H 3 HOH C 75 262 262 HOH HOH . H 3 HOH C 76 263 263 HOH HOH . H 3 HOH C 77 264 264 HOH HOH . H 3 HOH C 78 267 267 HOH HOH . H 3 HOH C 79 271 271 HOH HOH . H 3 HOH C 80 275 275 HOH HOH . H 3 HOH C 81 282 282 HOH HOH . H 3 HOH C 82 284 284 HOH HOH . H 3 HOH C 83 285 285 HOH HOH . H 3 HOH C 84 288 288 HOH HOH . H 3 HOH C 85 289 289 HOH HOH . H 3 HOH C 86 290 290 HOH HOH . H 3 HOH C 87 293 293 HOH HOH . H 3 HOH C 88 300 300 HOH HOH . H 3 HOH C 89 306 306 HOH HOH . H 3 HOH C 90 309 309 HOH HOH . H 3 HOH C 91 327 327 HOH HOH . H 3 HOH C 92 330 330 HOH HOH . H 3 HOH C 93 337 337 HOH HOH . H 3 HOH C 94 338 338 HOH HOH . H 3 HOH C 95 342 342 HOH HOH . H 3 HOH C 96 344 344 HOH HOH . H 3 HOH C 97 345 345 HOH HOH . H 3 HOH C 98 346 346 HOH HOH . H 3 HOH C 99 348 348 HOH HOH . H 3 HOH C 100 359 359 HOH HOH . H 3 HOH C 101 388 388 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 2 -52.163 27.73 5.598 1 62.98 ? P PO4 153 B 1 HETATM 2 O O1 PO4 . . . D 2 -52.642 28.034 4.198 1 62.91 ? O1 PO4 153 B 1 HETATM 3 O O2 PO4 . . . D 2 -52.935 28.573 6.585 1 62.9 ? O2 PO4 153 B 1 HETATM 4 O O3 PO4 . . . D 2 -52.387 26.268 5.907 1 62.85 ? O3 PO4 153 B 1 HETATM 5 O O4 PO4 . . . D 2 -50.69 28.047 5.704 1 62.95 ? O4 PO4 153 B 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #