data_3L8S # _model_server_result.job_id 40CJ70Te5C9mDxvztQLTqw _model_server_result.datetime_utc '2024-11-26 09:23:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3l8s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":361}' # _entry.id 3L8S # _exptl.entry_id 3L8S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 532.402 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[(4-bromo-2,6-difluorobenzyl)oxy]-5-{[(4-pyrrolidin-1-ylbutyl)carbamoyl]amino}isothiazole-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3L8S _cell.length_a 66.98 _cell.length_b 69.1 _cell.length_c 74.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3L8S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H24 Br F2 N5 O3 S' _chem_comp.formula_weight 532.402 _chem_comp.id BFF _chem_comp.mon_nstd_flag . _chem_comp.name 3-[(4-bromo-2,6-difluorobenzyl)oxy]-5-{[(4-pyrrolidin-1-ylbutyl)carbamoyl]amino}isothiazole-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-(4-bromo-2,6-difluorobenzyloxy)-5-(3-(4-(pyrrolidin-1-yl)butyl)ureido)isothiazole-4-carboxamide # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAW NAA BFF sing 70 n n NAA HNAA BFF sing 71 n n NAA HNAB BFF sing 72 n n OAB CAW BFF doub 73 n n CAX OAC BFF doub 74 n n FAD CAZ BFF sing 75 n n CBA FAE BFF sing 76 n n BRAF CAY BFF sing 77 n n CAG CAZ BFF doub 78 n y CAG CAY BFF sing 79 n y CAG HAG BFF sing 80 n n CAY CAH BFF doub 81 n y CAH CBA BFF sing 82 n y CAH HAH BFF sing 83 n n CAM CAI BFF sing 84 n n CAJ CAI BFF sing 85 n n CAI HAI BFF sing 86 n n CAI HAIA BFF sing 87 n n CAJ CAN BFF sing 88 n n CAJ HAJ BFF sing 89 n n CAJ HAJA BFF sing 90 n n CAO CAK BFF sing 91 n n CAK CAL BFF sing 92 n n CAK HAK BFF sing 93 n n CAK HAKA BFF sing 94 n n CAL CAP BFF sing 95 n n CAL HAL BFF sing 96 n n CAL HALA BFF sing 97 n n CAM NAS BFF sing 98 n n CAM HAM BFF sing 99 n n CAM HAMA BFF sing 100 n n NBF CAN BFF sing 101 n n CAN HAN BFF sing 102 n n CAN HANA BFF sing 103 n n CAO NBF BFF sing 104 n n CAO HAO BFF sing 105 n n CAO HAOA BFF sing 106 n n NBF CAP BFF sing 107 n n CAP HAP BFF sing 108 n n CAP HAPA BFF sing 109 n n OAU CAQ BFF sing 110 n n CBC CAQ BFF sing 111 n n CAQ HAQ BFF sing 112 n n CAQ HAQA BFF sing 113 n n CBB NAR BFF doub 114 n y SAV NAR BFF sing 115 n y NAS CAX BFF sing 116 n n NAS HNAS BFF sing 117 n n CAX NAT BFF sing 118 n n NAT CBD BFF sing 119 n n NAT HNAT BFF sing 120 n n CBB OAU BFF sing 121 n n CBD SAV BFF sing 122 n y CAW CBE BFF sing 123 n n CAZ CBC BFF sing 124 n y CBC CBA BFF doub 125 n y CBE CBB BFF sing 126 n y CBE CBD BFF doub 127 n y # _atom_sites.entry_id 3L8S _atom_sites.fract_transf_matrix[1][1] 0.01493 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014472 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013459 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BOG A 1 1000 1000 BOG BOG . C 3 BFF A 1 361 1 BFF BFF . D 4 HOH A 1 362 1 HOH HOH . D 4 HOH A 2 363 2 HOH HOH . D 4 HOH A 3 364 4 HOH HOH . D 4 HOH A 4 365 5 HOH HOH . D 4 HOH A 5 366 6 HOH HOH . D 4 HOH A 6 367 7 HOH HOH . D 4 HOH A 7 368 8 HOH HOH . D 4 HOH A 8 369 9 HOH HOH . D 4 HOH A 9 370 10 HOH HOH . D 4 HOH A 10 371 11 HOH HOH . D 4 HOH A 11 372 12 HOH HOH . D 4 HOH A 12 373 13 HOH HOH . D 4 HOH A 13 374 14 HOH HOH . D 4 HOH A 14 375 15 HOH HOH . D 4 HOH A 15 376 16 HOH HOH . D 4 HOH A 16 377 17 HOH HOH . D 4 HOH A 17 378 18 HOH HOH . D 4 HOH A 18 379 20 HOH HOH . D 4 HOH A 19 380 21 HOH HOH . D 4 HOH A 20 381 22 HOH HOH . D 4 HOH A 21 382 23 HOH HOH . D 4 HOH A 22 383 24 HOH HOH . D 4 HOH A 23 384 25 HOH HOH . D 4 HOH A 24 385 26 HOH HOH . D 4 HOH A 25 386 27 HOH HOH . D 4 HOH A 26 387 28 HOH HOH . D 4 HOH A 27 388 29 HOH HOH . D 4 HOH A 28 389 30 HOH HOH . D 4 HOH A 29 390 32 HOH HOH . D 4 HOH A 30 391 33 HOH HOH . D 4 HOH A 31 392 34 HOH HOH . D 4 HOH A 32 393 35 HOH HOH . D 4 HOH A 33 394 36 HOH HOH . D 4 HOH A 34 395 37 HOH HOH . D 4 HOH A 35 396 38 HOH HOH . D 4 HOH A 36 397 39 HOH HOH . D 4 HOH A 37 398 40 HOH HOH . D 4 HOH A 38 399 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N NAA BFF . . . C 3 21.014 0.476 -24.522 1 64.61 ? NAA BFF 361 A 1 HETATM 2 O OAB BFF . . . C 3 21.743 2.214 -25.739 1 65.79 ? OAB BFF 361 A 1 HETATM 3 O OAC BFF . . . C 3 22.045 6.606 -23.377 1 69.72 ? OAC BFF 361 A 1 HETATM 4 F FAD BFF . . . C 3 25.43 -0.96 -21.241 1 68.83 ? FAD BFF 361 A 1 HETATM 5 F FAE BFF . . . C 3 20.817 -1.758 -20.102 1 67.82 ? FAE BFF 361 A 1 HETATM 6 BR BRAF BFF . . . C 3 24.019 -5.824 -21.203 1 69.46 ? BRAF BFF 361 A 1 HETATM 7 C CAG BFF . . . C 3 24.616 -3.12 -21.168 1 65.76 ? CAG BFF 361 A 1 HETATM 8 C CAH BFF . . . C 3 22.311 -3.577 -20.58 1 66.35 ? CAH BFF 361 A 1 HETATM 9 C CAI BFF . . . C 3 20.058 8.642 -24.753 1 69.52 ? CAI BFF 361 A 1 HETATM 10 C CAJ BFF . . . C 3 18.594 8.201 -25.046 1 68.53 ? CAJ BFF 361 A 1 HETATM 11 C CAK BFF . . . C 3 17.138 3.859 -23.963 1 64.54 ? CAK BFF 361 A 1 HETATM 12 C CAL BFF . . . C 3 18.298 3.916 -22.98 1 64.91 ? CAL BFF 361 A 1 HETATM 13 C CAM BFF . . . C 3 21.123 8.013 -25.697 1 69.92 ? CAM BFF 361 A 1 HETATM 14 C CAN BFF . . . C 3 17.88 7.505 -23.864 1 66.29 ? CAN BFF 361 A 1 HETATM 15 C CAO BFF . . . C 3 16.816 5.334 -24.264 1 65.92 ? CAO BFF 361 A 1 HETATM 16 C CAP BFF . . . C 3 18.443 5.419 -22.693 1 65.61 ? CAP BFF 361 A 1 HETATM 17 C CAQ BFF . . . C 3 22.884 0.027 -20.569 1 66.28 ? CAQ BFF 361 A 1 HETATM 18 N NAR BFF . . . C 3 22.521 2.794 -21.108 1 66.03 ? NAR BFF 361 A 1 HETATM 19 N NAS BFF . . . C 3 21.184 6.551 -25.475 1 69.75 ? NAS BFF 361 A 1 HETATM 20 N NAT BFF . . . C 3 21.519 4.626 -24.333 1 68.31 ? NAT BFF 361 A 1 HETATM 21 O OAU BFF . . . C 3 22.438 0.534 -21.879 1 66.03 ? OAU BFF 361 A 1 HETATM 22 S SAV BFF . . . C 3 22.246 4.305 -21.738 1 67.03 ? SAV BFF 361 A 1 HETATM 23 C CAW BFF . . . C 3 21.581 1.675 -24.648 1 65.75 ? CAW BFF 361 A 1 HETATM 24 C CAX BFF . . . C 3 21.61 5.964 -24.341 1 69.48 ? CAX BFF 361 A 1 HETATM 25 C CAY BFF . . . C 3 23.588 -4.006 -20.945 1 65.81 ? CAY BFF 361 A 1 HETATM 26 C CAZ BFF . . . C 3 24.384 -1.775 -21.024 1 67 ? CAZ BFF 361 A 1 HETATM 27 C CBA BFF . . . C 3 22.059 -2.209 -20.44 1 67.67 ? CBA BFF 361 A 1 HETATM 28 C CBB BFF . . . C 3 22.301 1.888 -22.087 1 66.27 ? CBB BFF 361 A 1 HETATM 29 C CBC BFF . . . C 3 23.119 -1.317 -20.648 1 66.51 ? CBC BFF 361 A 1 HETATM 30 C CBD BFF . . . C 3 21.862 3.833 -23.307 1 67.12 ? CBD BFF 361 A 1 HETATM 31 C CBE BFF . . . C 3 21.919 2.441 -23.341 1 66.06 ? CBE BFF 361 A 1 HETATM 32 N NBF BFF . . . C 3 18.062 6.04 -23.968 1 65.8 ? NBF BFF 361 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 32 #