data_3L8Z # _model_server_result.job_id jzneOtmzw9HH3dq-GYhVKw _model_server_result.datetime_utc '2024-11-27 00:53:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3l8z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 3L8Z # _exptl.entry_id 3L8Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3L8Z _cell.length_a 88.082 _cell.length_b 88.082 _cell.length_c 133.391 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3L8Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3L8Z _atom_sites.fract_transf_matrix[1][1] 0.011353 _atom_sites.fract_transf_matrix[1][2] 0.006555 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013109 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007497 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GNP A 1 201 201 GNP GNP . C 3 MG A 1 202 202 MG MG . D 4 CA A 1 203 203 CA CA . E 4 CA A 1 204 204 CA CA . F 4 CA A 1 205 205 CA CA . G 4 CA A 1 206 206 CA CA . H 5 HOH A 1 167 167 HOH HOH . H 5 HOH A 2 168 168 HOH HOH . H 5 HOH A 3 169 169 HOH HOH . H 5 HOH A 4 170 170 HOH HOH . H 5 HOH A 5 171 1 HOH HOH . H 5 HOH A 6 172 172 HOH HOH . H 5 HOH A 7 173 173 HOH HOH . H 5 HOH A 8 174 174 HOH HOH . H 5 HOH A 9 175 2 HOH HOH . H 5 HOH A 10 176 176 HOH HOH . H 5 HOH A 11 177 177 HOH HOH . H 5 HOH A 12 178 178 HOH HOH . H 5 HOH A 13 179 179 HOH HOH . H 5 HOH A 14 180 3 HOH HOH . H 5 HOH A 15 181 181 HOH HOH . H 5 HOH A 16 182 4 HOH HOH . H 5 HOH A 17 183 6 HOH HOH . H 5 HOH A 18 184 7 HOH HOH . H 5 HOH A 19 185 8 HOH HOH . H 5 HOH A 20 186 186 HOH HOH . H 5 HOH A 21 187 187 HOH HOH . H 5 HOH A 22 188 9 HOH HOH . H 5 HOH A 23 189 189 HOH HOH . H 5 HOH A 24 190 10 HOH HOH . H 5 HOH A 25 191 191 HOH HOH . H 5 HOH A 26 192 11 HOH HOH . H 5 HOH A 27 193 193 HOH HOH . H 5 HOH A 28 194 194 HOH HOH . H 5 HOH A 29 195 12 HOH HOH . H 5 HOH A 30 196 196 HOH HOH . H 5 HOH A 31 197 13 HOH HOH . H 5 HOH A 32 198 198 HOH HOH . H 5 HOH A 33 199 14 HOH HOH . H 5 HOH A 34 200 15 HOH HOH . H 5 HOH A 35 207 207 HOH HOH . H 5 HOH A 36 208 16 HOH HOH . H 5 HOH A 37 209 17 HOH HOH . H 5 HOH A 38 210 18 HOH HOH . H 5 HOH A 39 211 211 HOH HOH . H 5 HOH A 40 212 212 HOH HOH . H 5 HOH A 41 213 213 HOH HOH . H 5 HOH A 42 214 19 HOH HOH . H 5 HOH A 43 215 20 HOH HOH . H 5 HOH A 44 216 23 HOH HOH . H 5 HOH A 45 217 217 HOH HOH . H 5 HOH A 46 218 218 HOH HOH . H 5 HOH A 47 219 25 HOH HOH . H 5 HOH A 48 220 27 HOH HOH . H 5 HOH A 49 221 221 HOH HOH . H 5 HOH A 50 222 222 HOH HOH . H 5 HOH A 51 223 223 HOH HOH . H 5 HOH A 52 224 28 HOH HOH . H 5 HOH A 53 225 30 HOH HOH . H 5 HOH A 54 226 31 HOH HOH . H 5 HOH A 55 227 32 HOH HOH . H 5 HOH A 56 228 228 HOH HOH . H 5 HOH A 57 229 33 HOH HOH . H 5 HOH A 58 230 34 HOH HOH . H 5 HOH A 59 231 35 HOH HOH . H 5 HOH A 60 232 36 HOH HOH . H 5 HOH A 61 233 233 HOH HOH . H 5 HOH A 62 234 234 HOH HOH . H 5 HOH A 63 235 37 HOH HOH . H 5 HOH A 64 236 236 HOH HOH . H 5 HOH A 65 237 237 HOH HOH . H 5 HOH A 66 238 238 HOH HOH . H 5 HOH A 67 239 239 HOH HOH . H 5 HOH A 68 240 240 HOH HOH . H 5 HOH A 69 241 241 HOH HOH . H 5 HOH A 70 242 242 HOH HOH . H 5 HOH A 71 243 243 HOH HOH . H 5 HOH A 72 244 244 HOH HOH . H 5 HOH A 73 245 245 HOH HOH . H 5 HOH A 74 246 38 HOH HOH . H 5 HOH A 75 247 247 HOH HOH . H 5 HOH A 76 248 248 HOH HOH . H 5 HOH A 77 249 249 HOH HOH . H 5 HOH A 78 250 250 HOH HOH . H 5 HOH A 79 251 39 HOH HOH . H 5 HOH A 80 252 252 HOH HOH . H 5 HOH A 81 253 253 HOH HOH . H 5 HOH A 82 254 254 HOH HOH . H 5 HOH A 83 255 255 HOH HOH . H 5 HOH A 84 256 256 HOH HOH . H 5 HOH A 85 257 40 HOH HOH . H 5 HOH A 86 258 41 HOH HOH . H 5 HOH A 87 259 259 HOH HOH . H 5 HOH A 88 260 42 HOH HOH . H 5 HOH A 89 261 43 HOH HOH . H 5 HOH A 90 262 262 HOH HOH . H 5 HOH A 91 263 263 HOH HOH . H 5 HOH A 92 264 264 HOH HOH . H 5 HOH A 93 265 44 HOH HOH . H 5 HOH A 94 266 45 HOH HOH . H 5 HOH A 95 267 46 HOH HOH . H 5 HOH A 96 268 47 HOH HOH . H 5 HOH A 97 269 269 HOH HOH . H 5 HOH A 98 270 270 HOH HOH . H 5 HOH A 99 271 48 HOH HOH . H 5 HOH A 100 272 49 HOH HOH . H 5 HOH A 101 273 273 HOH HOH . H 5 HOH A 102 274 274 HOH HOH . H 5 HOH A 103 275 275 HOH HOH . H 5 HOH A 104 276 276 HOH HOH . H 5 HOH A 105 277 50 HOH HOH . H 5 HOH A 106 278 51 HOH HOH . H 5 HOH A 107 279 279 HOH HOH . H 5 HOH A 108 280 280 HOH HOH . H 5 HOH A 109 281 281 HOH HOH . H 5 HOH A 110 282 52 HOH HOH . H 5 HOH A 111 283 283 HOH HOH . H 5 HOH A 112 284 284 HOH HOH . H 5 HOH A 113 285 285 HOH HOH . H 5 HOH A 114 286 286 HOH HOH . H 5 HOH A 115 287 53 HOH HOH . H 5 HOH A 116 288 54 HOH HOH . H 5 HOH A 117 289 289 HOH HOH . H 5 HOH A 118 290 290 HOH HOH . H 5 HOH A 119 291 55 HOH HOH . H 5 HOH A 120 292 292 HOH HOH . H 5 HOH A 121 293 57 HOH HOH . H 5 HOH A 122 294 294 HOH HOH . H 5 HOH A 123 295 295 HOH HOH . H 5 HOH A 124 296 296 HOH HOH . H 5 HOH A 125 297 297 HOH HOH . H 5 HOH A 126 298 58 HOH HOH . H 5 HOH A 127 299 299 HOH HOH . H 5 HOH A 128 300 300 HOH HOH . H 5 HOH A 129 301 301 HOH HOH . H 5 HOH A 130 302 302 HOH HOH . H 5 HOH A 131 303 303 HOH HOH . H 5 HOH A 132 304 304 HOH HOH . H 5 HOH A 133 305 305 HOH HOH . H 5 HOH A 134 306 306 HOH HOH . H 5 HOH A 135 307 307 HOH HOH . H 5 HOH A 136 308 59 HOH HOH . H 5 HOH A 137 309 309 HOH HOH . H 5 HOH A 138 310 310 HOH HOH . H 5 HOH A 139 311 311 HOH HOH . H 5 HOH A 140 312 312 HOH HOH . H 5 HOH A 141 313 313 HOH HOH . H 5 HOH A 142 314 314 HOH HOH . H 5 HOH A 143 315 315 HOH HOH . H 5 HOH A 144 316 316 HOH HOH . H 5 HOH A 145 317 317 HOH HOH . H 5 HOH A 146 318 318 HOH HOH . H 5 HOH A 147 319 60 HOH HOH . H 5 HOH A 148 320 320 HOH HOH . H 5 HOH A 149 321 61 HOH HOH . H 5 HOH A 150 322 322 HOH HOH . H 5 HOH A 151 323 62 HOH HOH . H 5 HOH A 152 324 324 HOH HOH . H 5 HOH A 153 325 63 HOH HOH . H 5 HOH A 154 326 65 HOH HOH . H 5 HOH A 155 327 327 HOH HOH . H 5 HOH A 156 328 66 HOH HOH . H 5 HOH A 157 329 329 HOH HOH . H 5 HOH A 158 330 330 HOH HOH . H 5 HOH A 159 331 331 HOH HOH . H 5 HOH A 160 332 332 HOH HOH . H 5 HOH A 161 333 333 HOH HOH . H 5 HOH A 162 334 334 HOH HOH . H 5 HOH A 163 335 67 HOH HOH . H 5 HOH A 164 336 336 HOH HOH . H 5 HOH A 165 337 337 HOH HOH . H 5 HOH A 166 338 338 HOH HOH . H 5 HOH A 167 339 339 HOH HOH . H 5 HOH A 168 340 340 HOH HOH . H 5 HOH A 169 341 341 HOH HOH . H 5 HOH A 170 342 342 HOH HOH . H 5 HOH A 171 343 343 HOH HOH . H 5 HOH A 172 344 344 HOH HOH . H 5 HOH A 173 345 345 HOH HOH . H 5 HOH A 174 346 346 HOH HOH . H 5 HOH A 175 347 347 HOH HOH . H 5 HOH A 176 348 348 HOH HOH . H 5 HOH A 177 349 349 HOH HOH . H 5 HOH A 178 350 350 HOH HOH . H 5 HOH A 179 351 351 HOH HOH . H 5 HOH A 180 352 352 HOH HOH . H 5 HOH A 181 353 68 HOH HOH . H 5 HOH A 182 354 69 HOH HOH . H 5 HOH A 183 355 70 HOH HOH . H 5 HOH A 184 356 72 HOH HOH . H 5 HOH A 185 357 73 HOH HOH . H 5 HOH A 186 358 74 HOH HOH . H 5 HOH A 187 359 75 HOH HOH . H 5 HOH A 188 360 76 HOH HOH . H 5 HOH A 189 361 77 HOH HOH . H 5 HOH A 190 362 78 HOH HOH . H 5 HOH A 191 363 79 HOH HOH . H 5 HOH A 192 364 80 HOH HOH . H 5 HOH A 193 365 81 HOH HOH . H 5 HOH A 194 366 82 HOH HOH . H 5 HOH A 195 367 83 HOH HOH . H 5 HOH A 196 368 84 HOH HOH . H 5 HOH A 197 369 85 HOH HOH . H 5 HOH A 198 370 86 HOH HOH . H 5 HOH A 199 371 87 HOH HOH . H 5 HOH A 200 372 88 HOH HOH . H 5 HOH A 201 373 89 HOH HOH . H 5 HOH A 202 374 90 HOH HOH . H 5 HOH A 203 375 91 HOH HOH . H 5 HOH A 204 376 92 HOH HOH . H 5 HOH A 205 377 93 HOH HOH . H 5 HOH A 206 378 94 HOH HOH . H 5 HOH A 207 379 95 HOH HOH . H 5 HOH A 208 380 96 HOH HOH . H 5 HOH A 209 381 97 HOH HOH . H 5 HOH A 210 382 98 HOH HOH . H 5 HOH A 211 383 99 HOH HOH . H 5 HOH A 212 384 100 HOH HOH . H 5 HOH A 213 385 101 HOH HOH . H 5 HOH A 214 386 102 HOH HOH . H 5 HOH A 215 387 103 HOH HOH . H 5 HOH A 216 388 104 HOH HOH . H 5 HOH A 217 389 105 HOH HOH . H 5 HOH A 218 390 106 HOH HOH . H 5 HOH A 219 391 107 HOH HOH . H 5 HOH A 220 392 108 HOH HOH . H 5 HOH A 221 393 109 HOH HOH . H 5 HOH A 222 394 110 HOH HOH . H 5 HOH A 223 395 111 HOH HOH . H 5 HOH A 224 396 112 HOH HOH . H 5 HOH A 225 397 113 HOH HOH . H 5 HOH A 226 398 114 HOH HOH . H 5 HOH A 227 399 116 HOH HOH . H 5 HOH A 228 400 117 HOH HOH . H 5 HOH A 229 401 118 HOH HOH . H 5 HOH A 230 402 119 HOH HOH . H 5 HOH A 231 403 120 HOH HOH . H 5 HOH A 232 404 121 HOH HOH . H 5 HOH A 233 405 122 HOH HOH . H 5 HOH A 234 406 124 HOH HOH . H 5 HOH A 235 407 125 HOH HOH . H 5 HOH A 236 408 126 HOH HOH . H 5 HOH A 237 409 130 HOH HOH . H 5 HOH A 238 410 131 HOH HOH . H 5 HOH A 239 411 132 HOH HOH . H 5 HOH A 240 412 133 HOH HOH . H 5 HOH A 241 413 134 HOH HOH . H 5 HOH A 242 414 135 HOH HOH . H 5 HOH A 243 415 137 HOH HOH . H 5 HOH A 244 416 138 HOH HOH . H 5 HOH A 245 417 140 HOH HOH . H 5 HOH A 246 418 144 HOH HOH . H 5 HOH A 247 419 146 HOH HOH . H 5 HOH A 248 420 147 HOH HOH . H 5 HOH A 249 421 148 HOH HOH . H 5 HOH A 250 422 150 HOH HOH . H 5 HOH A 251 423 151 HOH HOH . H 5 HOH A 252 424 152 HOH HOH . H 5 HOH A 253 425 153 HOH HOH . H 5 HOH A 254 426 155 HOH HOH . H 5 HOH A 255 427 156 HOH HOH . H 5 HOH A 256 428 157 HOH HOH . H 5 HOH A 257 429 158 HOH HOH . H 5 HOH A 258 430 159 HOH HOH . H 5 HOH A 259 431 161 HOH HOH . H 5 HOH A 260 432 163 HOH HOH . H 5 HOH A 261 433 164 HOH HOH . H 5 HOH A 262 434 166 HOH HOH . H 5 HOH A 263 435 201 HOH HOH . H 5 HOH A 264 436 202 HOH HOH . H 5 HOH A 265 437 205 HOH HOH . H 5 HOH A 266 438 206 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x -21.882 _atom_site.Cartn_y -17.656 _atom_site.Cartn_z -27.238 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 14.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 204 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #