data_3LA3 # _model_server_result.job_id qZXWUl_lJtLeBif2rlXPhQ _model_server_result.datetime_utc '2024-11-15 09:31:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3la3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":224}' # _entry.id 3LA3 # _exptl.entry_id 3LA3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 168.096 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2,2-difluoropentanedioic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LA3 _cell.length_a 68.03 _cell.length_b 70.08 _cell.length_c 149.73 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LA3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C5 H6 F2 O4' _chem_comp.formula_weight 168.096 _chem_comp.id 2FT _chem_comp.mon_nstd_flag . _chem_comp.name '2,2-difluoropentanedioic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C02 2FT sing 1 n n C02 O03 2FT doub 2 n n C02 C04 2FT sing 3 n n C04 C05 2FT sing 4 n n C05 C06 2FT sing 5 n n C06 F07 2FT sing 6 n n C06 F08 2FT sing 7 n n C06 C09 2FT sing 8 n n C09 O10 2FT doub 9 n n C09 O11 2FT sing 10 n n O01 HO01 2FT sing 11 n n C04 H04 2FT sing 12 n n C04 H04A 2FT sing 13 n n C05 H05 2FT sing 14 n n C05 H05A 2FT sing 15 n n O11 HO11 2FT sing 16 n n # _atom_sites.entry_id 3LA3 _atom_sites.fract_transf_matrix[1][1] 0.014699 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014269 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006679 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2FT A 1 224 223 2FT DFP . D 2 2FT B 1 224 223 2FT DFP . E 3 HOH A 1 225 4 HOH HOH . E 3 HOH A 2 226 6 HOH HOH . E 3 HOH A 3 227 8 HOH HOH . E 3 HOH A 4 228 10 HOH HOH . E 3 HOH A 5 229 11 HOH HOH . E 3 HOH A 6 230 15 HOH HOH . E 3 HOH A 7 231 16 HOH HOH . E 3 HOH A 8 232 20 HOH HOH . E 3 HOH A 9 233 22 HOH HOH . E 3 HOH A 10 234 25 HOH HOH . E 3 HOH A 11 235 28 HOH HOH . E 3 HOH A 12 236 29 HOH HOH . E 3 HOH A 13 237 31 HOH HOH . E 3 HOH A 14 238 32 HOH HOH . E 3 HOH A 15 239 35 HOH HOH . E 3 HOH A 16 240 38 HOH HOH . E 3 HOH A 17 241 40 HOH HOH . E 3 HOH A 18 242 48 HOH HOH . E 3 HOH A 19 243 49 HOH HOH . E 3 HOH A 20 244 50 HOH HOH . E 3 HOH A 21 245 52 HOH HOH . E 3 HOH A 22 246 53 HOH HOH . E 3 HOH A 23 247 57 HOH HOH . E 3 HOH A 24 248 61 HOH HOH . E 3 HOH A 25 249 65 HOH HOH . E 3 HOH A 26 250 68 HOH HOH . E 3 HOH A 27 251 70 HOH HOH . E 3 HOH A 28 252 74 HOH HOH . E 3 HOH A 29 253 75 HOH HOH . E 3 HOH A 30 254 79 HOH HOH . E 3 HOH A 31 255 80 HOH HOH . E 3 HOH A 32 256 81 HOH HOH . E 3 HOH A 33 257 83 HOH HOH . E 3 HOH A 34 258 87 HOH HOH . E 3 HOH A 35 259 89 HOH HOH . E 3 HOH A 36 260 91 HOH HOH . E 3 HOH A 37 261 92 HOH HOH . E 3 HOH A 38 262 94 HOH HOH . E 3 HOH A 39 263 95 HOH HOH . E 3 HOH A 40 264 96 HOH HOH . E 3 HOH A 41 265 97 HOH HOH . E 3 HOH A 42 266 99 HOH HOH . E 3 HOH A 43 267 105 HOH HOH . E 3 HOH A 44 268 109 HOH HOH . E 3 HOH A 45 269 110 HOH HOH . E 3 HOH A 46 270 112 HOH HOH . E 3 HOH A 47 271 113 HOH HOH . E 3 HOH A 48 272 114 HOH HOH . E 3 HOH A 49 273 116 HOH HOH . E 3 HOH A 50 274 117 HOH HOH . E 3 HOH A 51 275 120 HOH HOH . E 3 HOH A 52 276 123 HOH HOH . E 3 HOH A 53 277 127 HOH HOH . E 3 HOH A 54 278 130 HOH HOH . E 3 HOH A 55 279 132 HOH HOH . E 3 HOH A 56 280 133 HOH HOH . E 3 HOH A 57 281 134 HOH HOH . E 3 HOH A 58 282 135 HOH HOH . E 3 HOH A 59 283 148 HOH HOH . E 3 HOH A 60 284 149 HOH HOH . E 3 HOH A 61 285 150 HOH HOH . E 3 HOH A 62 286 151 HOH HOH . E 3 HOH A 63 287 155 HOH HOH . E 3 HOH A 64 288 158 HOH HOH . F 3 HOH B 1 225 1 HOH HOH . F 3 HOH B 2 226 2 HOH HOH . F 3 HOH B 3 227 3 HOH HOH . F 3 HOH B 4 228 5 HOH HOH . F 3 HOH B 5 229 7 HOH HOH . F 3 HOH B 6 230 9 HOH HOH . F 3 HOH B 7 231 12 HOH HOH . F 3 HOH B 8 232 13 HOH HOH . F 3 HOH B 9 233 14 HOH HOH . F 3 HOH B 10 234 17 HOH HOH . F 3 HOH B 11 235 18 HOH HOH . F 3 HOH B 12 236 19 HOH HOH . F 3 HOH B 13 237 21 HOH HOH . F 3 HOH B 14 238 23 HOH HOH . F 3 HOH B 15 239 24 HOH HOH . F 3 HOH B 16 240 26 HOH HOH . F 3 HOH B 17 241 27 HOH HOH . F 3 HOH B 18 242 30 HOH HOH . F 3 HOH B 19 243 33 HOH HOH . F 3 HOH B 20 244 34 HOH HOH . F 3 HOH B 21 245 36 HOH HOH . F 3 HOH B 22 246 37 HOH HOH . F 3 HOH B 23 247 39 HOH HOH . F 3 HOH B 24 248 41 HOH HOH . F 3 HOH B 25 249 42 HOH HOH . F 3 HOH B 26 250 43 HOH HOH . F 3 HOH B 27 251 44 HOH HOH . F 3 HOH B 28 252 45 HOH HOH . F 3 HOH B 29 253 46 HOH HOH . F 3 HOH B 30 254 47 HOH HOH . F 3 HOH B 31 255 51 HOH HOH . F 3 HOH B 32 256 54 HOH HOH . F 3 HOH B 33 257 55 HOH HOH . F 3 HOH B 34 258 56 HOH HOH . F 3 HOH B 35 259 58 HOH HOH . F 3 HOH B 36 260 59 HOH HOH . F 3 HOH B 37 261 60 HOH HOH . F 3 HOH B 38 262 62 HOH HOH . F 3 HOH B 39 263 63 HOH HOH . F 3 HOH B 40 264 64 HOH HOH . F 3 HOH B 41 265 66 HOH HOH . F 3 HOH B 42 266 67 HOH HOH . F 3 HOH B 43 267 69 HOH HOH . F 3 HOH B 44 268 71 HOH HOH . F 3 HOH B 45 269 72 HOH HOH . F 3 HOH B 46 270 73 HOH HOH . F 3 HOH B 47 271 76 HOH HOH . F 3 HOH B 48 272 77 HOH HOH . F 3 HOH B 49 273 78 HOH HOH . F 3 HOH B 50 274 82 HOH HOH . F 3 HOH B 51 275 84 HOH HOH . F 3 HOH B 52 276 85 HOH HOH . F 3 HOH B 53 277 86 HOH HOH . F 3 HOH B 54 278 88 HOH HOH . F 3 HOH B 55 279 90 HOH HOH . F 3 HOH B 56 280 93 HOH HOH . F 3 HOH B 57 281 98 HOH HOH . F 3 HOH B 58 282 100 HOH HOH . F 3 HOH B 59 283 101 HOH HOH . F 3 HOH B 60 284 102 HOH HOH . F 3 HOH B 61 285 103 HOH HOH . F 3 HOH B 62 286 104 HOH HOH . F 3 HOH B 63 287 106 HOH HOH . F 3 HOH B 64 288 107 HOH HOH . F 3 HOH B 65 289 108 HOH HOH . F 3 HOH B 66 290 111 HOH HOH . F 3 HOH B 67 291 115 HOH HOH . F 3 HOH B 68 292 118 HOH HOH . F 3 HOH B 69 293 119 HOH HOH . F 3 HOH B 70 294 121 HOH HOH . F 3 HOH B 71 295 122 HOH HOH . F 3 HOH B 72 296 124 HOH HOH . F 3 HOH B 73 297 125 HOH HOH . F 3 HOH B 74 298 126 HOH HOH . F 3 HOH B 75 299 128 HOH HOH . F 3 HOH B 76 300 129 HOH HOH . F 3 HOH B 77 301 131 HOH HOH . F 3 HOH B 78 302 136 HOH HOH . F 3 HOH B 79 303 137 HOH HOH . F 3 HOH B 80 304 138 HOH HOH . F 3 HOH B 81 305 139 HOH HOH . F 3 HOH B 82 306 140 HOH HOH . F 3 HOH B 83 307 141 HOH HOH . F 3 HOH B 84 308 142 HOH HOH . F 3 HOH B 85 309 143 HOH HOH . F 3 HOH B 86 310 144 HOH HOH . F 3 HOH B 87 311 145 HOH HOH . F 3 HOH B 88 312 146 HOH HOH . F 3 HOH B 89 313 147 HOH HOH . F 3 HOH B 90 314 152 HOH HOH . F 3 HOH B 91 315 153 HOH HOH . F 3 HOH B 92 316 154 HOH HOH . F 3 HOH B 93 317 156 HOH HOH . F 3 HOH B 94 318 157 HOH HOH . F 3 HOH B 95 319 159 HOH HOH . F 3 HOH B 96 320 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 2FT . . . C 2 0.491 36.729 24.729 1 40.98 ? O01 2FT 224 A 1 HETATM 2 C C02 2FT . . . C 2 -0.581 36.055 25.31 1 42.81 ? C02 2FT 224 A 1 HETATM 3 O O03 2FT . . . C 2 -1.286 36.72 26.001 1 43.44 ? O03 2FT 224 A 1 HETATM 4 C C04 2FT . . . C 2 -0.329 34.618 25.762 1 45.48 ? C04 2FT 224 A 1 HETATM 5 C C05 2FT . . . C 2 1.099 34.14 25.597 1 47.32 ? C05 2FT 224 A 1 HETATM 6 C C06 2FT . . . C 2 1.213 33.733 24.13 1 52.89 ? C06 2FT 224 A 1 HETATM 7 F F07 2FT . . . C 2 0.808 34.775 23.351 1 58.08 ? F07 2FT 224 A 1 HETATM 8 F F08 2FT . . . C 2 0.291 32.764 23.879 1 56.69 ? F08 2FT 224 A 1 HETATM 9 C C09 2FT . . . C 2 2.617 33.291 23.727 1 48.7 ? C09 2FT 224 A 1 HETATM 10 O O10 2FT . . . C 2 3.468 34.1 23.587 1 44.92 ? O10 2FT 224 A 1 HETATM 11 O O11 2FT . . . C 2 2.759 32.03 23.171 1 44.44 ? O11 2FT 224 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #