data_3LA7 # _model_server_result.job_id L4HmW9QaR_X1FYagKqQa4A _model_server_result.datetime_utc '2024-12-21 13:46:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3la7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":224}' # _entry.id 3LA7 # _exptl.entry_id 3LA7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 292.369 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 'octyl beta-D-glucopyranoside' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LA7 _cell.length_a 67.506 _cell.length_b 85.624 _cell.length_c 171.959 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LA7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H28 O6' _chem_comp.formula_weight 292.369 _chem_comp.id BOG _chem_comp.mon_nstd_flag n _chem_comp.name 'octyl beta-D-glucopyranoside' _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms 'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BOG sing 70 n n C1 C2 BOG sing 71 n n C1 O5 BOG sing 72 n n C1 H1 BOG sing 73 n n O1 C1' BOG sing 74 n n C2 O2 BOG sing 75 n n C2 C3 BOG sing 76 n n C2 H2 BOG sing 77 n n O2 HO2 BOG sing 78 n n C3 O3 BOG sing 79 n n C3 C4 BOG sing 80 n n C3 H3 BOG sing 81 n n O3 HO3 BOG sing 82 n n C4 O4 BOG sing 83 n n C4 C5 BOG sing 84 n n C4 H4 BOG sing 85 n n O4 HO4 BOG sing 86 n n C5 O5 BOG sing 87 n n C5 C6 BOG sing 88 n n C5 H5 BOG sing 89 n n C6 O6 BOG sing 90 n n C6 H61 BOG sing 91 n n C6 H62 BOG sing 92 n n O6 HO6 BOG sing 93 n n C1' C2' BOG sing 94 n n C1' "H1'1" BOG sing 95 n n C1' "H1'2" BOG sing 96 n n C2' C3' BOG sing 97 n n C2' "H2'1" BOG sing 98 n n C2' "H2'2" BOG sing 99 n n C3' C4' BOG sing 100 n n C3' "H3'1" BOG sing 101 n n C3' "H3'2" BOG sing 102 n n C4' C5' BOG sing 103 n n C4' "H4'1" BOG sing 104 n n C4' "H4'2" BOG sing 105 n n C5' C6' BOG sing 106 n n C5' "H5'1" BOG sing 107 n n C5' "H5'2" BOG sing 108 n n C6' C7' BOG sing 109 n n C6' "H6'1" BOG sing 110 n n C6' "H6'2" BOG sing 111 n n C7' C8' BOG sing 112 n n C7' "H7'1" BOG sing 113 n n C7' "H7'2" BOG sing 114 n n C8' "H8'1" BOG sing 115 n n C8' "H8'2" BOG sing 116 n n C8' "H8'3" BOG sing 117 n n # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.identifier b-octylglucoside _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 3LA7 _atom_sites.fract_transf_matrix[1][1] 0.014813 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011679 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005815 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BOG A 1 224 215 BOG OBG . D 3 HOH A 1 225 3 HOH HOH . D 3 HOH A 2 226 4 HOH HOH . D 3 HOH A 3 227 5 HOH HOH . D 3 HOH A 4 228 8 HOH HOH . D 3 HOH A 5 229 9 HOH HOH . D 3 HOH A 6 230 10 HOH HOH . D 3 HOH A 7 231 11 HOH HOH . D 3 HOH A 8 232 12 HOH HOH . D 3 HOH A 9 233 14 HOH HOH . D 3 HOH A 10 234 20 HOH HOH . D 3 HOH A 11 235 21 HOH HOH . D 3 HOH A 12 236 23 HOH HOH . D 3 HOH A 13 237 24 HOH HOH . D 3 HOH A 14 238 27 HOH HOH . D 3 HOH A 15 239 28 HOH HOH . D 3 HOH A 16 240 30 HOH HOH . D 3 HOH A 17 241 32 HOH HOH . D 3 HOH A 18 242 33 HOH HOH . D 3 HOH A 19 243 34 HOH HOH . D 3 HOH A 20 244 36 HOH HOH . D 3 HOH A 21 245 37 HOH HOH . D 3 HOH A 22 246 38 HOH HOH . D 3 HOH A 23 247 39 HOH HOH . D 3 HOH A 24 248 40 HOH HOH . D 3 HOH A 25 249 41 HOH HOH . D 3 HOH A 26 250 43 HOH HOH . D 3 HOH A 27 251 46 HOH HOH . D 3 HOH A 28 252 47 HOH HOH . D 3 HOH A 29 253 51 HOH HOH . D 3 HOH A 30 254 53 HOH HOH . D 3 HOH A 31 255 56 HOH HOH . D 3 HOH A 32 256 57 HOH HOH . D 3 HOH A 33 257 63 HOH HOH . D 3 HOH A 34 258 65 HOH HOH . D 3 HOH A 35 259 67 HOH HOH . D 3 HOH A 36 260 68 HOH HOH . D 3 HOH A 37 261 70 HOH HOH . D 3 HOH A 38 262 71 HOH HOH . D 3 HOH A 39 263 74 HOH HOH . D 3 HOH A 40 264 75 HOH HOH . D 3 HOH A 41 265 76 HOH HOH . D 3 HOH A 42 266 77 HOH HOH . D 3 HOH A 43 267 78 HOH HOH . D 3 HOH A 44 268 79 HOH HOH . D 3 HOH A 45 269 81 HOH HOH . D 3 HOH A 46 270 83 HOH HOH . D 3 HOH A 47 271 85 HOH HOH . D 3 HOH A 48 272 86 HOH HOH . D 3 HOH A 49 273 88 HOH HOH . D 3 HOH A 50 274 90 HOH HOH . D 3 HOH A 51 275 91 HOH HOH . D 3 HOH A 52 276 93 HOH HOH . D 3 HOH A 53 277 94 HOH HOH . D 3 HOH A 54 278 96 HOH HOH . D 3 HOH A 55 279 99 HOH HOH . D 3 HOH A 56 280 100 HOH HOH . D 3 HOH A 57 281 101 HOH HOH . D 3 HOH A 58 282 102 HOH HOH . D 3 HOH A 59 283 104 HOH HOH . D 3 HOH A 60 284 106 HOH HOH . D 3 HOH A 61 285 108 HOH HOH . D 3 HOH A 62 286 109 HOH HOH . D 3 HOH A 63 287 111 HOH HOH . D 3 HOH A 64 288 112 HOH HOH . D 3 HOH A 65 289 113 HOH HOH . D 3 HOH A 66 290 114 HOH HOH . D 3 HOH A 67 291 116 HOH HOH . D 3 HOH A 68 292 117 HOH HOH . D 3 HOH A 69 293 120 HOH HOH . D 3 HOH A 70 294 123 HOH HOH . D 3 HOH A 71 295 124 HOH HOH . D 3 HOH A 72 296 125 HOH HOH . D 3 HOH A 73 297 127 HOH HOH . D 3 HOH A 74 298 129 HOH HOH . D 3 HOH A 75 299 132 HOH HOH . D 3 HOH A 76 300 133 HOH HOH . D 3 HOH A 77 301 134 HOH HOH . D 3 HOH A 78 302 137 HOH HOH . D 3 HOH A 79 303 140 HOH HOH . D 3 HOH A 80 304 142 HOH HOH . D 3 HOH A 81 305 143 HOH HOH . D 3 HOH A 82 306 144 HOH HOH . D 3 HOH A 83 307 145 HOH HOH . D 3 HOH A 84 308 146 HOH HOH . D 3 HOH A 85 309 148 HOH HOH . D 3 HOH A 86 310 151 HOH HOH . D 3 HOH A 87 311 153 HOH HOH . D 3 HOH A 88 312 155 HOH HOH . D 3 HOH A 89 313 156 HOH HOH . D 3 HOH A 90 314 157 HOH HOH . D 3 HOH A 91 315 158 HOH HOH . D 3 HOH A 92 316 163 HOH HOH . D 3 HOH A 93 317 166 HOH HOH . D 3 HOH A 94 318 169 HOH HOH . D 3 HOH A 95 319 170 HOH HOH . E 3 HOH B 1 224 1 HOH HOH . E 3 HOH B 2 225 2 HOH HOH . E 3 HOH B 3 226 6 HOH HOH . E 3 HOH B 4 227 7 HOH HOH . E 3 HOH B 5 228 13 HOH HOH . E 3 HOH B 6 229 15 HOH HOH . E 3 HOH B 7 230 16 HOH HOH . E 3 HOH B 8 231 17 HOH HOH . E 3 HOH B 9 232 18 HOH HOH . E 3 HOH B 10 233 19 HOH HOH . E 3 HOH B 11 234 22 HOH HOH . E 3 HOH B 12 235 25 HOH HOH . E 3 HOH B 13 236 26 HOH HOH . E 3 HOH B 14 237 29 HOH HOH . E 3 HOH B 15 238 31 HOH HOH . E 3 HOH B 16 239 35 HOH HOH . E 3 HOH B 17 240 42 HOH HOH . E 3 HOH B 18 241 44 HOH HOH . E 3 HOH B 19 242 45 HOH HOH . E 3 HOH B 20 243 48 HOH HOH . E 3 HOH B 21 244 49 HOH HOH . E 3 HOH B 22 245 50 HOH HOH . E 3 HOH B 23 246 52 HOH HOH . E 3 HOH B 24 247 54 HOH HOH . E 3 HOH B 25 248 55 HOH HOH . E 3 HOH B 26 249 58 HOH HOH . E 3 HOH B 27 250 59 HOH HOH . E 3 HOH B 28 251 60 HOH HOH . E 3 HOH B 29 252 61 HOH HOH . E 3 HOH B 30 253 62 HOH HOH . E 3 HOH B 31 254 64 HOH HOH . E 3 HOH B 32 255 66 HOH HOH . E 3 HOH B 33 256 69 HOH HOH . E 3 HOH B 34 257 72 HOH HOH . E 3 HOH B 35 258 73 HOH HOH . E 3 HOH B 36 259 80 HOH HOH . E 3 HOH B 37 260 82 HOH HOH . E 3 HOH B 38 261 84 HOH HOH . E 3 HOH B 39 262 87 HOH HOH . E 3 HOH B 40 263 89 HOH HOH . E 3 HOH B 41 264 92 HOH HOH . E 3 HOH B 42 265 95 HOH HOH . E 3 HOH B 43 266 97 HOH HOH . E 3 HOH B 44 267 98 HOH HOH . E 3 HOH B 45 268 103 HOH HOH . E 3 HOH B 46 269 105 HOH HOH . E 3 HOH B 47 270 107 HOH HOH . E 3 HOH B 48 271 110 HOH HOH . E 3 HOH B 49 272 115 HOH HOH . E 3 HOH B 50 273 118 HOH HOH . E 3 HOH B 51 274 119 HOH HOH . E 3 HOH B 52 275 121 HOH HOH . E 3 HOH B 53 276 122 HOH HOH . E 3 HOH B 54 277 126 HOH HOH . E 3 HOH B 55 278 128 HOH HOH . E 3 HOH B 56 279 130 HOH HOH . E 3 HOH B 57 280 131 HOH HOH . E 3 HOH B 58 281 135 HOH HOH . E 3 HOH B 59 282 136 HOH HOH . E 3 HOH B 60 283 138 HOH HOH . E 3 HOH B 61 284 139 HOH HOH . E 3 HOH B 62 285 141 HOH HOH . E 3 HOH B 63 286 147 HOH HOH . E 3 HOH B 64 287 149 HOH HOH . E 3 HOH B 65 288 150 HOH HOH . E 3 HOH B 66 289 152 HOH HOH . E 3 HOH B 67 290 154 HOH HOH . E 3 HOH B 68 291 159 HOH HOH . E 3 HOH B 69 292 160 HOH HOH . E 3 HOH B 70 293 161 HOH HOH . E 3 HOH B 71 294 162 HOH HOH . E 3 HOH B 72 295 164 HOH HOH . E 3 HOH B 73 296 165 HOH HOH . E 3 HOH B 74 297 167 HOH HOH . E 3 HOH B 75 298 168 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BOG . . . C 2 -4.912 -11.074 30.163 1 44.21 ? C1 BOG 224 A 1 HETATM 2 O O1 BOG . . . C 2 -5.439 -9.746 30.172 1 42.74 ? O1 BOG 224 A 1 HETATM 3 C C2 BOG . . . C 2 -4.825 -11.723 28.768 1 44.9 ? C2 BOG 224 A 1 HETATM 4 O O2 BOG . . . C 2 -5.916 -11.551 27.922 1 43.44 ? O2 BOG 224 A 1 HETATM 5 C C3 BOG . . . C 2 -4.187 -13.103 28.751 1 46.82 ? C3 BOG 224 A 1 HETATM 6 O O3 BOG . . . C 2 -4.082 -13.715 27.494 1 49.08 ? O3 BOG 224 A 1 HETATM 7 C C4 BOG . . . C 2 -3.006 -13.258 29.703 1 47.61 ? C4 BOG 224 A 1 HETATM 8 O O4 BOG . . . C 2 -2.41 -14.522 29.712 1 49.05 ? O4 BOG 224 A 1 HETATM 9 C C5 BOG . . . C 2 -3.213 -12.592 31.081 1 47.83 ? C5 BOG 224 A 1 HETATM 10 O O5 BOG . . . C 2 -3.747 -11.257 30.956 1 44.93 ? O5 BOG 224 A 1 HETATM 11 C C6 BOG . . . C 2 -1.962 -12.667 31.96 1 49.59 ? C6 BOG 224 A 1 HETATM 12 O O6 BOG . . . C 2 -0.82 -12.267 31.255 1 53.67 ? O6 BOG 224 A 1 HETATM 13 C C1' BOG . . . C 2 -5.89 -9.179 31.383 1 41.91 ? C1' BOG 224 A 1 HETATM 14 C C2' BOG . . . C 2 -6.558 -7.782 31.294 1 44.84 ? C2' BOG 224 A 1 HETATM 15 C C3' BOG . . . C 2 -6.951 -7.239 32.698 1 44 ? C3' BOG 224 A 1 HETATM 16 C C4' BOG . . . C 2 -8.136 -6.26 32.863 1 44.74 ? C4' BOG 224 A 1 HETATM 17 C C5' BOG . . . C 2 -9.075 -6.614 34.075 1 42.97 ? C5' BOG 224 A 1 HETATM 18 C C6' BOG . . . C 2 -9.282 -5.637 35.283 1 43.88 ? C6' BOG 224 A 1 HETATM 19 C C7' BOG . . . C 2 -9.455 -6.243 36.711 1 43.1 ? C7' BOG 224 A 1 HETATM 20 C C8' BOG . . . C 2 -8.146 -6.598 37.447 1 47.83 ? C8' BOG 224 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 20 #