data_3LAF # _model_server_result.job_id 5rgF97EOQ--439dVpCsJVQ _model_server_result.datetime_utc '2024-10-19 14:17:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3laf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":395}' # _entry.id 3LAF # _exptl.entry_id 3LAF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3LAF _cell.length_a 109.38 _cell.length_b 109.38 _cell.length_c 129.442 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LAF _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 2 BMA NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG A 401 NAG 2 n B NAG 2 B 2 NAG A 402 NAG 2 n B BMA 3 B 3 BMA A 403 BMA 2 n C NAG 1 C 1 NAG A 404 NAG 2 n C NAG 2 C 2 NAG A 405 NAG 2 n C BMA 3 C 3 BMA A 406 BMA # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 43 A CYS 23 1_555 A SG CYS 99 A CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? disulf ? disulf2 A SG CYS 143 A CYS 123 1_555 A SG CYS 194 A CYS 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf3 A SG CYS 243 A CYS 223 1_555 A SG CYS 292 A CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf4 A SG CYS 334 A CYS 314 1_555 A SG CYS 382 A CYS 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? covale ? covale1 A ND2 ASN 42 A ASN 22 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale2 A ND2 ASN 76 A ASN 56 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale3 A ND2 ASN 281 A ASN 261 1_555 D C1 NAG . A NAG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale4 A ND2 ASN 300 A ASN 280 1_555 E C1 NAG . A NAG 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.489 ? covale ? covale5 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.395 ? covale ? covale6 B O4 NAG . B NAG 2 1_555 B C1 BMA . B BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale7 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.379 ? covale ? covale8 C O4 NAG . C NAG 2 1_555 C C1 BMA . C BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.398 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3LAF _atom_sites.fract_transf_matrix[1][1] 0.009142 _atom_sites.fract_transf_matrix[1][2] 0.005278 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010557 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007725 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 NAG A 1 407 407 NAG NAG . E 3 NAG A 1 408 408 NAG NAG . F 4 SO4 A 1 384 1 SO4 SO4 . G 4 SO4 A 1 385 2 SO4 SO4 . H 4 SO4 A 1 386 3 SO4 SO4 . I 4 SO4 A 1 387 4 SO4 SO4 . J 4 SO4 A 1 388 5 SO4 SO4 . K 4 SO4 A 1 389 6 SO4 SO4 . L 4 SO4 A 1 390 7 SO4 SO4 . M 4 SO4 A 1 391 8 SO4 SO4 . N 4 SO4 A 1 392 9 SO4 SO4 . O 4 SO4 A 1 393 10 SO4 SO4 . P 4 SO4 A 1 394 11 SO4 SO4 . Q 4 SO4 A 1 395 12 SO4 SO4 . R 5 HOH A 1 396 1 HOH HOH . R 5 HOH A 2 397 2 HOH HOH . R 5 HOH A 3 398 3 HOH HOH . R 5 HOH A 4 399 4 HOH HOH . R 5 HOH A 5 400 5 HOH HOH . R 5 HOH A 6 409 6 HOH HOH . R 5 HOH A 7 410 7 HOH HOH . R 5 HOH A 8 411 8 HOH HOH . R 5 HOH A 9 412 9 HOH HOH . R 5 HOH A 10 413 10 HOH HOH . R 5 HOH A 11 414 11 HOH HOH . R 5 HOH A 12 415 12 HOH HOH . R 5 HOH A 13 416 13 HOH HOH . R 5 HOH A 14 417 14 HOH HOH . R 5 HOH A 15 418 15 HOH HOH . R 5 HOH A 16 419 16 HOH HOH . R 5 HOH A 17 420 17 HOH HOH . R 5 HOH A 18 421 18 HOH HOH . R 5 HOH A 19 422 19 HOH HOH . R 5 HOH A 20 423 20 HOH HOH . R 5 HOH A 21 424 21 HOH HOH . R 5 HOH A 22 425 22 HOH HOH . R 5 HOH A 23 426 23 HOH HOH . R 5 HOH A 24 427 24 HOH HOH . R 5 HOH A 25 428 25 HOH HOH . R 5 HOH A 26 429 26 HOH HOH . R 5 HOH A 27 430 27 HOH HOH . R 5 HOH A 28 431 28 HOH HOH . R 5 HOH A 29 432 29 HOH HOH . R 5 HOH A 30 433 30 HOH HOH . R 5 HOH A 31 434 31 HOH HOH . R 5 HOH A 32 435 32 HOH HOH . R 5 HOH A 33 436 33 HOH HOH . R 5 HOH A 34 437 34 HOH HOH . R 5 HOH A 35 438 35 HOH HOH . R 5 HOH A 36 439 36 HOH HOH . R 5 HOH A 37 440 37 HOH HOH . R 5 HOH A 38 441 38 HOH HOH . R 5 HOH A 39 442 39 HOH HOH . R 5 HOH A 40 443 40 HOH HOH . R 5 HOH A 41 444 41 HOH HOH . R 5 HOH A 42 445 42 HOH HOH . R 5 HOH A 43 446 43 HOH HOH . R 5 HOH A 44 447 44 HOH HOH . R 5 HOH A 45 448 45 HOH HOH . R 5 HOH A 46 449 46 HOH HOH . R 5 HOH A 47 450 47 HOH HOH . R 5 HOH A 48 451 48 HOH HOH . R 5 HOH A 49 452 49 HOH HOH . R 5 HOH A 50 453 50 HOH HOH . R 5 HOH A 51 454 51 HOH HOH . R 5 HOH A 52 455 52 HOH HOH . R 5 HOH A 53 456 53 HOH HOH . R 5 HOH A 54 457 54 HOH HOH . R 5 HOH A 55 458 55 HOH HOH . R 5 HOH A 56 459 56 HOH HOH . R 5 HOH A 57 460 57 HOH HOH . R 5 HOH A 58 461 58 HOH HOH . R 5 HOH A 59 462 59 HOH HOH . R 5 HOH A 60 463 60 HOH HOH . R 5 HOH A 61 464 61 HOH HOH . R 5 HOH A 62 465 62 HOH HOH . R 5 HOH A 63 466 63 HOH HOH . R 5 HOH A 64 467 64 HOH HOH . R 5 HOH A 65 468 65 HOH HOH . R 5 HOH A 66 469 66 HOH HOH . R 5 HOH A 67 470 67 HOH HOH . R 5 HOH A 68 471 68 HOH HOH . R 5 HOH A 69 472 69 HOH HOH . R 5 HOH A 70 473 70 HOH HOH . R 5 HOH A 71 474 71 HOH HOH . R 5 HOH A 72 475 72 HOH HOH . R 5 HOH A 73 476 73 HOH HOH . R 5 HOH A 74 477 74 HOH HOH . R 5 HOH A 75 478 75 HOH HOH . R 5 HOH A 76 479 76 HOH HOH . R 5 HOH A 77 480 77 HOH HOH . R 5 HOH A 78 481 78 HOH HOH . R 5 HOH A 79 482 79 HOH HOH . R 5 HOH A 80 483 80 HOH HOH . R 5 HOH A 81 484 81 HOH HOH . R 5 HOH A 82 485 82 HOH HOH . R 5 HOH A 83 486 83 HOH HOH . R 5 HOH A 84 487 84 HOH HOH . R 5 HOH A 85 488 85 HOH HOH . R 5 HOH A 86 489 86 HOH HOH . R 5 HOH A 87 490 87 HOH HOH . R 5 HOH A 88 491 88 HOH HOH . R 5 HOH A 89 492 89 HOH HOH . R 5 HOH A 90 493 90 HOH HOH . R 5 HOH A 91 494 91 HOH HOH . R 5 HOH A 92 495 92 HOH HOH . R 5 HOH A 93 496 93 HOH HOH . R 5 HOH A 94 497 94 HOH HOH . R 5 HOH A 95 498 95 HOH HOH . R 5 HOH A 96 499 96 HOH HOH . R 5 HOH A 97 500 97 HOH HOH . R 5 HOH A 98 501 98 HOH HOH . R 5 HOH A 99 502 99 HOH HOH . R 5 HOH A 100 503 100 HOH HOH . R 5 HOH A 101 504 101 HOH HOH . R 5 HOH A 102 505 102 HOH HOH . R 5 HOH A 103 506 103 HOH HOH . R 5 HOH A 104 507 104 HOH HOH . R 5 HOH A 105 508 105 HOH HOH . R 5 HOH A 106 509 106 HOH HOH . R 5 HOH A 107 510 107 HOH HOH . R 5 HOH A 108 511 108 HOH HOH . R 5 HOH A 109 512 109 HOH HOH . R 5 HOH A 110 513 110 HOH HOH . R 5 HOH A 111 514 111 HOH HOH . R 5 HOH A 112 515 112 HOH HOH . R 5 HOH A 113 516 113 HOH HOH . R 5 HOH A 114 517 114 HOH HOH . R 5 HOH A 115 518 115 HOH HOH . R 5 HOH A 116 519 116 HOH HOH . R 5 HOH A 117 520 117 HOH HOH . R 5 HOH A 118 521 118 HOH HOH . R 5 HOH A 119 522 119 HOH HOH . R 5 HOH A 120 523 120 HOH HOH . R 5 HOH A 121 524 121 HOH HOH . R 5 HOH A 122 525 122 HOH HOH . R 5 HOH A 123 526 123 HOH HOH . R 5 HOH A 124 527 124 HOH HOH . R 5 HOH A 125 528 125 HOH HOH . R 5 HOH A 126 529 126 HOH HOH . R 5 HOH A 127 530 127 HOH HOH . R 5 HOH A 128 531 128 HOH HOH . R 5 HOH A 129 532 129 HOH HOH . R 5 HOH A 130 533 130 HOH HOH . R 5 HOH A 131 534 131 HOH HOH . R 5 HOH A 132 535 132 HOH HOH . R 5 HOH A 133 536 133 HOH HOH . R 5 HOH A 134 537 134 HOH HOH . R 5 HOH A 135 538 135 HOH HOH . R 5 HOH A 136 539 136 HOH HOH . R 5 HOH A 137 540 137 HOH HOH . R 5 HOH A 138 541 138 HOH HOH . R 5 HOH A 139 542 139 HOH HOH . R 5 HOH A 140 543 140 HOH HOH . R 5 HOH A 141 544 141 HOH HOH . R 5 HOH A 142 545 142 HOH HOH . R 5 HOH A 143 546 143 HOH HOH . R 5 HOH A 144 547 144 HOH HOH . R 5 HOH A 145 548 145 HOH HOH . R 5 HOH A 146 549 146 HOH HOH . R 5 HOH A 147 550 147 HOH HOH . R 5 HOH A 148 551 148 HOH HOH . R 5 HOH A 149 552 149 HOH HOH . R 5 HOH A 150 553 150 HOH HOH . R 5 HOH A 151 554 151 HOH HOH . R 5 HOH A 152 555 152 HOH HOH . R 5 HOH A 153 556 153 HOH HOH . R 5 HOH A 154 557 154 HOH HOH . R 5 HOH A 155 558 155 HOH HOH . R 5 HOH A 156 559 156 HOH HOH . R 5 HOH A 157 560 157 HOH HOH . R 5 HOH A 158 561 158 HOH HOH . R 5 HOH A 159 562 159 HOH HOH . R 5 HOH A 160 563 160 HOH HOH . R 5 HOH A 161 564 161 HOH HOH . R 5 HOH A 162 565 162 HOH HOH . R 5 HOH A 163 566 163 HOH HOH . R 5 HOH A 164 567 164 HOH HOH . R 5 HOH A 165 568 165 HOH HOH . R 5 HOH A 166 569 166 HOH HOH . R 5 HOH A 167 570 167 HOH HOH . R 5 HOH A 168 571 168 HOH HOH . R 5 HOH A 169 572 169 HOH HOH . R 5 HOH A 170 573 170 HOH HOH . R 5 HOH A 171 574 171 HOH HOH . R 5 HOH A 172 575 172 HOH HOH . R 5 HOH A 173 576 173 HOH HOH . R 5 HOH A 174 577 174 HOH HOH . R 5 HOH A 175 578 175 HOH HOH . R 5 HOH A 176 579 176 HOH HOH . R 5 HOH A 177 580 177 HOH HOH . R 5 HOH A 178 581 178 HOH HOH . R 5 HOH A 179 582 179 HOH HOH . R 5 HOH A 180 583 180 HOH HOH . R 5 HOH A 181 584 181 HOH HOH . R 5 HOH A 182 585 182 HOH HOH . R 5 HOH A 183 586 183 HOH HOH . R 5 HOH A 184 587 184 HOH HOH . R 5 HOH A 185 588 185 HOH HOH . R 5 HOH A 186 589 186 HOH HOH . R 5 HOH A 187 590 187 HOH HOH . R 5 HOH A 188 591 188 HOH HOH . R 5 HOH A 189 592 189 HOH HOH . R 5 HOH A 190 593 190 HOH HOH . R 5 HOH A 191 594 191 HOH HOH . R 5 HOH A 192 595 192 HOH HOH . R 5 HOH A 193 596 193 HOH HOH . R 5 HOH A 194 597 194 HOH HOH . R 5 HOH A 195 598 195 HOH HOH . R 5 HOH A 196 599 196 HOH HOH . R 5 HOH A 197 600 197 HOH HOH . R 5 HOH A 198 601 198 HOH HOH . R 5 HOH A 199 602 199 HOH HOH . R 5 HOH A 200 603 200 HOH HOH . R 5 HOH A 201 604 201 HOH HOH . R 5 HOH A 202 605 202 HOH HOH . R 5 HOH A 203 606 203 HOH HOH . R 5 HOH A 204 607 204 HOH HOH . R 5 HOH A 205 608 205 HOH HOH . R 5 HOH A 206 609 206 HOH HOH . R 5 HOH A 207 610 207 HOH HOH . R 5 HOH A 208 611 208 HOH HOH . R 5 HOH A 209 612 209 HOH HOH . R 5 HOH A 210 613 210 HOH HOH . R 5 HOH A 211 614 211 HOH HOH . R 5 HOH A 212 615 212 HOH HOH . R 5 HOH A 213 616 213 HOH HOH . R 5 HOH A 214 617 214 HOH HOH . R 5 HOH A 215 618 215 HOH HOH . R 5 HOH A 216 619 216 HOH HOH . R 5 HOH A 217 620 217 HOH HOH . R 5 HOH A 218 621 218 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . Q 4 41.947 -21.569 24.477 1 158.01 ? S SO4 395 A 1 HETATM 2 O O1 SO4 . . . Q 4 43.282 -21.78 23.881 1 157.43 ? O1 SO4 395 A 1 HETATM 3 O O2 SO4 . . . Q 4 41.031 -21.028 23.457 1 158.28 ? O2 SO4 395 A 1 HETATM 4 O O3 SO4 . . . Q 4 41.421 -22.852 24.974 1 158 ? O3 SO4 395 A 1 HETATM 5 O O4 SO4 . . . Q 4 42.046 -20.616 25.596 1 157.68 ? O4 SO4 395 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #