data_3LAI # _model_server_result.job_id jcHIx0UWQehukvqc_bQp9Q _model_server_result.datetime_utc '2024-11-15 06:10:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lai # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":501}' # _entry.id 3LAI # _exptl.entry_id 3LAI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LAI _cell.length_a 61.354 _cell.length_b 86.502 _cell.length_c 122.749 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LAI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,M 1 1 B,G,H,I,N 2 1 C,J,K,L,O 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 J N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D FE HEM . A HEM 200 1_555 E N1 IMD . A IMD 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.889 ? metalc ? metalc2 D FE HEM . A HEM 200 1_555 F N1 IMD . A IMD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc3 I FE HEM . B HEM 200 1_555 G N1 IMD . B IMD 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc4 I FE HEM . B HEM 200 1_555 H N1 IMD . B IMD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? metalc ? metalc5 L FE HEM . C HEM 200 1_555 J N1 IMD . C IMD 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 242 n y N1 C5 IMD sing 243 n y N1 HN1 IMD sing 244 n n C2 N3 IMD doub 245 n y C2 H2 IMD sing 246 n n N3 C4 IMD sing 247 n y N3 HN3 IMD sing 248 n n C4 C5 IMD doub 249 n y C4 H4 IMD sing 250 n n C5 H5 IMD sing 251 n n # _atom_sites.entry_id 3LAI _atom_sites.fract_transf_matrix[1][1] 0.016299 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01156 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008147 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HEM A 1 200 200 HEM HEM . E 3 IMD A 1 501 501 IMD IMD . F 3 IMD A 1 502 502 IMD IMD . G 3 IMD B 1 501 501 IMD IMD . H 3 IMD B 1 502 502 IMD IMD . I 2 HEM B 1 200 200 HEM HEM . J 3 IMD C 1 501 501 IMD IMD . K 3 IMD C 1 502 502 IMD IMD . L 2 HEM C 1 200 200 HEM HEM . M 4 HOH A 1 189 1 HOH HOH . M 4 HOH A 2 190 2 HOH HOH . M 4 HOH A 3 191 3 HOH HOH . M 4 HOH A 4 192 4 HOH HOH . M 4 HOH A 5 193 5 HOH HOH . M 4 HOH A 6 194 6 HOH HOH . M 4 HOH A 7 195 7 HOH HOH . M 4 HOH A 8 196 8 HOH HOH . M 4 HOH A 9 197 9 HOH HOH . M 4 HOH A 10 198 10 HOH HOH . M 4 HOH A 11 199 11 HOH HOH . M 4 HOH A 12 201 12 HOH HOH . M 4 HOH A 13 202 13 HOH HOH . M 4 HOH A 14 203 14 HOH HOH . M 4 HOH A 15 204 15 HOH HOH . M 4 HOH A 16 205 16 HOH HOH . M 4 HOH A 17 206 17 HOH HOH . M 4 HOH A 18 207 18 HOH HOH . M 4 HOH A 19 208 19 HOH HOH . M 4 HOH A 20 209 20 HOH HOH . M 4 HOH A 21 210 21 HOH HOH . M 4 HOH A 22 211 22 HOH HOH . M 4 HOH A 23 212 31 HOH HOH . M 4 HOH A 24 213 44 HOH HOH . M 4 HOH A 25 214 46 HOH HOH . M 4 HOH A 26 215 56 HOH HOH . M 4 HOH A 27 216 57 HOH HOH . M 4 HOH A 28 217 63 HOH HOH . M 4 HOH A 29 218 64 HOH HOH . M 4 HOH A 30 219 65 HOH HOH . M 4 HOH A 31 220 67 HOH HOH . M 4 HOH A 32 221 68 HOH HOH . M 4 HOH A 33 222 69 HOH HOH . M 4 HOH A 34 223 71 HOH HOH . M 4 HOH A 35 224 73 HOH HOH . M 4 HOH A 36 225 75 HOH HOH . M 4 HOH A 37 226 77 HOH HOH . M 4 HOH A 38 227 81 HOH HOH . M 4 HOH A 39 228 82 HOH HOH . M 4 HOH A 40 229 83 HOH HOH . M 4 HOH A 41 230 87 HOH HOH . M 4 HOH A 42 231 88 HOH HOH . M 4 HOH A 43 232 89 HOH HOH . M 4 HOH A 44 233 92 HOH HOH . M 4 HOH A 45 234 93 HOH HOH . M 4 HOH A 46 235 97 HOH HOH . M 4 HOH A 47 236 99 HOH HOH . M 4 HOH A 48 237 102 HOH HOH . M 4 HOH A 49 238 103 HOH HOH . M 4 HOH A 50 239 105 HOH HOH . M 4 HOH A 51 240 107 HOH HOH . M 4 HOH A 52 241 110 HOH HOH . M 4 HOH A 53 242 111 HOH HOH . M 4 HOH A 54 243 112 HOH HOH . M 4 HOH A 55 244 120 HOH HOH . N 4 HOH B 1 189 23 HOH HOH . N 4 HOH B 2 190 24 HOH HOH . N 4 HOH B 3 191 25 HOH HOH . N 4 HOH B 4 192 26 HOH HOH . N 4 HOH B 5 193 27 HOH HOH . N 4 HOH B 6 194 28 HOH HOH . N 4 HOH B 7 195 29 HOH HOH . N 4 HOH B 8 196 30 HOH HOH . N 4 HOH B 9 197 32 HOH HOH . N 4 HOH B 10 198 49 HOH HOH . N 4 HOH B 11 199 51 HOH HOH . N 4 HOH B 12 201 59 HOH HOH . N 4 HOH B 13 202 66 HOH HOH . N 4 HOH B 14 203 70 HOH HOH . N 4 HOH B 15 204 74 HOH HOH . N 4 HOH B 16 205 76 HOH HOH . N 4 HOH B 17 206 79 HOH HOH . N 4 HOH B 18 207 86 HOH HOH . N 4 HOH B 19 208 90 HOH HOH . N 4 HOH B 20 209 91 HOH HOH . N 4 HOH B 21 210 95 HOH HOH . N 4 HOH B 22 211 96 HOH HOH . N 4 HOH B 23 212 104 HOH HOH . N 4 HOH B 24 213 106 HOH HOH . N 4 HOH B 25 214 114 HOH HOH . N 4 HOH B 26 215 115 HOH HOH . N 4 HOH B 27 216 117 HOH HOH . N 4 HOH B 28 217 118 HOH HOH . O 4 HOH C 1 189 33 HOH HOH . O 4 HOH C 2 190 34 HOH HOH . O 4 HOH C 3 191 35 HOH HOH . O 4 HOH C 4 192 36 HOH HOH . O 4 HOH C 5 193 37 HOH HOH . O 4 HOH C 6 194 38 HOH HOH . O 4 HOH C 7 195 39 HOH HOH . O 4 HOH C 8 196 40 HOH HOH . O 4 HOH C 9 197 41 HOH HOH . O 4 HOH C 10 198 42 HOH HOH . O 4 HOH C 11 199 43 HOH HOH . O 4 HOH C 12 201 45 HOH HOH . O 4 HOH C 13 202 47 HOH HOH . O 4 HOH C 14 203 48 HOH HOH . O 4 HOH C 15 204 50 HOH HOH . O 4 HOH C 16 205 52 HOH HOH . O 4 HOH C 17 206 53 HOH HOH . O 4 HOH C 18 207 54 HOH HOH . O 4 HOH C 19 208 55 HOH HOH . O 4 HOH C 20 209 58 HOH HOH . O 4 HOH C 21 210 60 HOH HOH . O 4 HOH C 22 211 61 HOH HOH . O 4 HOH C 23 212 62 HOH HOH . O 4 HOH C 24 213 72 HOH HOH . O 4 HOH C 25 214 78 HOH HOH . O 4 HOH C 26 215 80 HOH HOH . O 4 HOH C 27 216 84 HOH HOH . O 4 HOH C 28 217 85 HOH HOH . O 4 HOH C 29 218 94 HOH HOH . O 4 HOH C 30 219 98 HOH HOH . O 4 HOH C 31 220 100 HOH HOH . O 4 HOH C 32 221 101 HOH HOH . O 4 HOH C 33 222 108 HOH HOH . O 4 HOH C 34 223 109 HOH HOH . O 4 HOH C 35 224 113 HOH HOH . O 4 HOH C 36 225 116 HOH HOH . O 4 HOH C 37 226 119 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . J 3 -27.234 19.144 -4.737 1 33.67 ? N1 IMD 501 C 1 HETATM 2 C C2 IMD . . . J 3 -27.523 18.749 -5.996 1 36.37 ? C2 IMD 501 C 1 HETATM 3 N N3 IMD . . . J 3 -28.819 19.031 -6.253 1 33.52 ? N3 IMD 501 C 1 HETATM 4 C C4 IMD . . . J 3 -29.351 19.606 -5.154 1 36.51 ? C4 IMD 501 C 1 HETATM 5 C C5 IMD . . . J 3 -28.349 19.678 -4.196 1 37.13 ? C5 IMD 501 C 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #