data_3LB1 # _model_server_result.job_id 0Spzq9DqrbTcBhzZ1Lri-Q _model_server_result.datetime_utc '2024-11-26 13:12:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lb1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":192}' # _entry.id 3LB1 # _exptl.entry_id 3LB1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 220.008 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-IODOPHENOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LB1 _cell.length_a 57.838 _cell.length_b 67.254 _cell.length_c 69.128 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LB1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J 1 1 A,C,D,E,I 2 1 B,F,G,H,J 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_544 x+1/2,-y-1/2,-z-1 1 0 0 0 -1 0 0 0 -1 28.919 -33.627 -69.128 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 89 A HIS 89 1_555 C FE HEM . A HEM 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc2 B NE2 HIS 89 B HIS 89 1_555 G FE HEM . B HEM 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? # _chem_comp.formula 'C6 H5 I O' _chem_comp.formula_weight 220.008 _chem_comp.id IOL _chem_comp.mon_nstd_flag . _chem_comp.name 4-IODOPHENOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 IOL doub 255 n y C2 C1 IOL sing 256 n y C2 H2 IOL sing 257 n n C3 C4 IOL sing 258 n y C3 H3 IOL sing 259 n n C4 O4 IOL sing 260 n n C4 C5 IOL doub 261 n y O4 HO4 IOL sing 262 n n C5 C6 IOL sing 263 n y C5 H5 IOL sing 264 n n C6 C1 IOL doub 265 n y C6 H6 IOL sing 266 n n C1 I1 IOL sing 267 n n # _atom_sites.entry_id 3LB1 _atom_sites.fract_transf_matrix[1][1] 0.01729 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014869 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014466 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 139 139 HEM HEM . D 3 IOL A 1 191 191 IOL IOL . E 4 SO4 A 1 195 195 SO4 SO4 . F 4 SO4 B 1 196 196 SO4 SO4 . G 2 HEM B 1 139 139 HEM HEM . H 3 IOL B 1 192 192 IOL IOL . I 5 HOH A 1 201 201 HOH HOH . I 5 HOH A 2 202 202 HOH HOH . I 5 HOH A 3 204 204 HOH HOH . I 5 HOH A 4 205 205 HOH HOH . I 5 HOH A 5 207 207 HOH HOH . I 5 HOH A 6 208 208 HOH HOH . I 5 HOH A 7 213 213 HOH HOH . I 5 HOH A 8 216 216 HOH HOH . I 5 HOH A 9 218 218 HOH HOH . I 5 HOH A 10 220 220 HOH HOH . I 5 HOH A 11 224 224 HOH HOH . I 5 HOH A 12 226 226 HOH HOH . I 5 HOH A 13 228 228 HOH HOH . I 5 HOH A 14 230 230 HOH HOH . I 5 HOH A 15 231 231 HOH HOH . I 5 HOH A 16 233 233 HOH HOH . I 5 HOH A 17 234 234 HOH HOH . I 5 HOH A 18 235 235 HOH HOH . I 5 HOH A 19 240 240 HOH HOH . I 5 HOH A 20 242 242 HOH HOH . I 5 HOH A 21 243 243 HOH HOH . I 5 HOH A 22 244 244 HOH HOH . I 5 HOH A 23 247 247 HOH HOH . I 5 HOH A 24 248 248 HOH HOH . I 5 HOH A 25 250 250 HOH HOH . I 5 HOH A 26 251 251 HOH HOH . I 5 HOH A 27 256 256 HOH HOH . I 5 HOH A 28 260 260 HOH HOH . I 5 HOH A 29 261 261 HOH HOH . I 5 HOH A 30 263 263 HOH HOH . I 5 HOH A 31 264 264 HOH HOH . I 5 HOH A 32 265 265 HOH HOH . I 5 HOH A 33 266 266 HOH HOH . I 5 HOH A 34 267 267 HOH HOH . I 5 HOH A 35 268 268 HOH HOH . I 5 HOH A 36 269 269 HOH HOH . I 5 HOH A 37 270 270 HOH HOH . I 5 HOH A 38 273 273 HOH HOH . I 5 HOH A 39 274 274 HOH HOH . I 5 HOH A 40 275 275 HOH HOH . I 5 HOH A 41 277 277 HOH HOH . I 5 HOH A 42 280 280 HOH HOH . I 5 HOH A 43 284 284 HOH HOH . I 5 HOH A 44 290 290 HOH HOH . I 5 HOH A 45 294 294 HOH HOH . I 5 HOH A 46 295 295 HOH HOH . I 5 HOH A 47 296 296 HOH HOH . I 5 HOH A 48 297 297 HOH HOH . I 5 HOH A 49 300 300 HOH HOH . I 5 HOH A 50 301 301 HOH HOH . I 5 HOH A 51 308 308 HOH HOH . I 5 HOH A 52 309 309 HOH HOH . I 5 HOH A 53 311 311 HOH HOH . I 5 HOH A 54 312 312 HOH HOH . I 5 HOH A 55 314 314 HOH HOH . I 5 HOH A 56 317 317 HOH HOH . I 5 HOH A 57 329 329 HOH HOH . I 5 HOH A 58 330 330 HOH HOH . I 5 HOH A 59 334 334 HOH HOH . I 5 HOH A 60 335 335 HOH HOH . I 5 HOH A 61 336 336 HOH HOH . I 5 HOH A 62 337 337 HOH HOH . I 5 HOH A 63 338 338 HOH HOH . I 5 HOH A 64 340 340 HOH HOH . I 5 HOH A 65 349 349 HOH HOH . I 5 HOH A 66 350 350 HOH HOH . I 5 HOH A 67 354 354 HOH HOH . I 5 HOH A 68 358 358 HOH HOH . I 5 HOH A 69 361 361 HOH HOH . I 5 HOH A 70 362 362 HOH HOH . I 5 HOH A 71 363 363 HOH HOH . I 5 HOH A 72 364 364 HOH HOH . I 5 HOH A 73 367 367 HOH HOH . I 5 HOH A 74 371 371 HOH HOH . I 5 HOH A 75 373 373 HOH HOH . I 5 HOH A 76 378 378 HOH HOH . I 5 HOH A 77 379 379 HOH HOH . I 5 HOH A 78 381 381 HOH HOH . I 5 HOH A 79 383 383 HOH HOH . I 5 HOH A 80 384 384 HOH HOH . I 5 HOH A 81 386 386 HOH HOH . I 5 HOH A 82 388 388 HOH HOH . I 5 HOH A 83 389 389 HOH HOH . I 5 HOH A 84 393 393 HOH HOH . I 5 HOH A 85 396 396 HOH HOH . I 5 HOH A 86 399 399 HOH HOH . I 5 HOH A 87 404 404 HOH HOH . I 5 HOH A 88 405 405 HOH HOH . I 5 HOH A 89 407 407 HOH HOH . I 5 HOH A 90 409 409 HOH HOH . I 5 HOH A 91 410 410 HOH HOH . I 5 HOH A 92 411 411 HOH HOH . I 5 HOH A 93 416 416 HOH HOH . I 5 HOH A 94 424 424 HOH HOH . I 5 HOH A 95 426 426 HOH HOH . I 5 HOH A 96 427 427 HOH HOH . I 5 HOH A 97 429 429 HOH HOH . I 5 HOH A 98 434 434 HOH HOH . I 5 HOH A 99 435 435 HOH HOH . I 5 HOH A 100 445 445 HOH HOH . I 5 HOH A 101 447 447 HOH HOH . I 5 HOH A 102 453 453 HOH HOH . I 5 HOH A 103 458 458 HOH HOH . I 5 HOH A 104 471 471 HOH HOH . I 5 HOH A 105 483 483 HOH HOH . I 5 HOH A 106 487 487 HOH HOH . I 5 HOH A 107 501 501 HOH HOH . I 5 HOH A 108 515 515 HOH HOH . I 5 HOH A 109 516 516 HOH HOH . I 5 HOH A 110 517 517 HOH HOH . I 5 HOH A 111 532 532 HOH HOH . I 5 HOH A 112 534 534 HOH HOH . I 5 HOH A 113 537 537 HOH HOH . I 5 HOH A 114 544 544 HOH HOH . I 5 HOH A 115 547 547 HOH HOH . I 5 HOH A 116 549 549 HOH HOH . I 5 HOH A 117 550 550 HOH HOH . I 5 HOH A 118 552 552 HOH HOH . I 5 HOH A 119 556 556 HOH HOH . I 5 HOH A 120 558 558 HOH HOH . I 5 HOH A 121 566 566 HOH HOH . I 5 HOH A 122 574 574 HOH HOH . I 5 HOH A 123 580 580 HOH HOH . I 5 HOH A 124 585 585 HOH HOH . I 5 HOH A 125 598 598 HOH HOH . I 5 HOH A 126 603 603 HOH HOH . I 5 HOH A 127 613 613 HOH HOH . I 5 HOH A 128 617 617 HOH HOH . J 5 HOH B 1 203 203 HOH HOH . J 5 HOH B 2 206 206 HOH HOH . J 5 HOH B 3 209 209 HOH HOH . J 5 HOH B 4 210 210 HOH HOH . J 5 HOH B 5 211 211 HOH HOH . J 5 HOH B 6 212 212 HOH HOH . J 5 HOH B 7 214 214 HOH HOH . J 5 HOH B 8 215 215 HOH HOH . J 5 HOH B 9 217 217 HOH HOH . J 5 HOH B 10 219 219 HOH HOH . J 5 HOH B 11 221 221 HOH HOH . J 5 HOH B 12 222 222 HOH HOH . J 5 HOH B 13 223 223 HOH HOH . J 5 HOH B 14 225 225 HOH HOH . J 5 HOH B 15 227 227 HOH HOH . J 5 HOH B 16 229 229 HOH HOH . J 5 HOH B 17 232 232 HOH HOH . J 5 HOH B 18 236 236 HOH HOH . J 5 HOH B 19 237 237 HOH HOH . J 5 HOH B 20 238 238 HOH HOH . J 5 HOH B 21 239 239 HOH HOH . J 5 HOH B 22 241 241 HOH HOH . J 5 HOH B 23 246 246 HOH HOH . J 5 HOH B 24 249 249 HOH HOH . J 5 HOH B 25 253 253 HOH HOH . J 5 HOH B 26 255 255 HOH HOH . J 5 HOH B 27 257 257 HOH HOH . J 5 HOH B 28 258 258 HOH HOH . J 5 HOH B 29 262 262 HOH HOH . J 5 HOH B 30 271 271 HOH HOH . J 5 HOH B 31 272 272 HOH HOH . J 5 HOH B 32 276 276 HOH HOH . J 5 HOH B 33 278 278 HOH HOH . J 5 HOH B 34 279 279 HOH HOH . J 5 HOH B 35 281 281 HOH HOH . J 5 HOH B 36 282 282 HOH HOH . J 5 HOH B 37 283 283 HOH HOH . J 5 HOH B 38 285 285 HOH HOH . J 5 HOH B 39 286 286 HOH HOH . J 5 HOH B 40 288 288 HOH HOH . J 5 HOH B 41 289 289 HOH HOH . J 5 HOH B 42 292 292 HOH HOH . J 5 HOH B 43 293 293 HOH HOH . J 5 HOH B 44 298 298 HOH HOH . J 5 HOH B 45 299 299 HOH HOH . J 5 HOH B 46 302 302 HOH HOH . J 5 HOH B 47 304 304 HOH HOH . J 5 HOH B 48 305 305 HOH HOH . J 5 HOH B 49 306 306 HOH HOH . J 5 HOH B 50 310 310 HOH HOH . J 5 HOH B 51 313 313 HOH HOH . J 5 HOH B 52 315 315 HOH HOH . J 5 HOH B 53 316 316 HOH HOH . J 5 HOH B 54 318 318 HOH HOH . J 5 HOH B 55 319 319 HOH HOH . J 5 HOH B 56 321 321 HOH HOH . J 5 HOH B 57 322 322 HOH HOH . J 5 HOH B 58 323 323 HOH HOH . J 5 HOH B 59 325 325 HOH HOH . J 5 HOH B 60 326 326 HOH HOH . J 5 HOH B 61 328 328 HOH HOH . J 5 HOH B 62 332 332 HOH HOH . J 5 HOH B 63 333 333 HOH HOH . J 5 HOH B 64 341 341 HOH HOH . J 5 HOH B 65 343 343 HOH HOH . J 5 HOH B 66 344 344 HOH HOH . J 5 HOH B 67 345 345 HOH HOH . J 5 HOH B 68 346 346 HOH HOH . J 5 HOH B 69 347 347 HOH HOH . J 5 HOH B 70 351 351 HOH HOH . J 5 HOH B 71 352 352 HOH HOH . J 5 HOH B 72 365 365 HOH HOH . J 5 HOH B 73 368 368 HOH HOH . J 5 HOH B 74 369 369 HOH HOH . J 5 HOH B 75 372 372 HOH HOH . J 5 HOH B 76 375 375 HOH HOH . J 5 HOH B 77 376 376 HOH HOH . J 5 HOH B 78 380 380 HOH HOH . J 5 HOH B 79 382 382 HOH HOH . J 5 HOH B 80 385 385 HOH HOH . J 5 HOH B 81 390 390 HOH HOH . J 5 HOH B 82 392 392 HOH HOH . J 5 HOH B 83 394 394 HOH HOH . J 5 HOH B 84 395 395 HOH HOH . J 5 HOH B 85 397 397 HOH HOH . J 5 HOH B 86 398 398 HOH HOH . J 5 HOH B 87 400 400 HOH HOH . J 5 HOH B 88 403 403 HOH HOH . J 5 HOH B 89 406 406 HOH HOH . J 5 HOH B 90 408 408 HOH HOH . J 5 HOH B 91 412 412 HOH HOH . J 5 HOH B 92 414 414 HOH HOH . J 5 HOH B 93 420 420 HOH HOH . J 5 HOH B 94 431 431 HOH HOH . J 5 HOH B 95 437 437 HOH HOH . J 5 HOH B 96 439 439 HOH HOH . J 5 HOH B 97 440 440 HOH HOH . J 5 HOH B 98 443 443 HOH HOH . J 5 HOH B 99 451 451 HOH HOH . J 5 HOH B 100 452 452 HOH HOH . J 5 HOH B 101 454 454 HOH HOH . J 5 HOH B 102 455 455 HOH HOH . J 5 HOH B 103 456 456 HOH HOH . J 5 HOH B 104 462 462 HOH HOH . J 5 HOH B 105 463 463 HOH HOH . J 5 HOH B 106 464 464 HOH HOH . J 5 HOH B 107 478 478 HOH HOH . J 5 HOH B 108 479 479 HOH HOH . J 5 HOH B 109 480 480 HOH HOH . J 5 HOH B 110 482 482 HOH HOH . J 5 HOH B 111 491 491 HOH HOH . J 5 HOH B 112 494 494 HOH HOH . J 5 HOH B 113 503 503 HOH HOH . J 5 HOH B 114 504 504 HOH HOH . J 5 HOH B 115 505 505 HOH HOH . J 5 HOH B 116 509 509 HOH HOH . J 5 HOH B 117 520 520 HOH HOH . J 5 HOH B 118 523 523 HOH HOH . J 5 HOH B 119 524 524 HOH HOH . J 5 HOH B 120 525 525 HOH HOH . J 5 HOH B 121 530 530 HOH HOH . J 5 HOH B 122 548 548 HOH HOH . J 5 HOH B 123 551 551 HOH HOH . J 5 HOH B 124 553 553 HOH HOH . J 5 HOH B 125 555 555 HOH HOH . J 5 HOH B 126 559 559 HOH HOH . J 5 HOH B 127 561 561 HOH HOH . J 5 HOH B 128 562 562 HOH HOH . J 5 HOH B 129 568 568 HOH HOH . J 5 HOH B 130 570 570 HOH HOH . J 5 HOH B 131 572 572 HOH HOH . J 5 HOH B 132 575 575 HOH HOH . J 5 HOH B 133 576 576 HOH HOH . J 5 HOH B 134 577 577 HOH HOH . J 5 HOH B 135 593 593 HOH HOH . J 5 HOH B 136 612 612 HOH HOH . J 5 HOH B 137 614 614 HOH HOH . J 5 HOH B 138 615 615 HOH HOH . J 5 HOH B 139 616 616 HOH HOH . J 5 HOH B 140 618 618 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 IOL . . . H 3 -5.147 0.702 -54.022 1 15.69 ? C2 IOL 192 B 1 HETATM 2 C C3 IOL . . . H 3 -4.475 0.608 -55.243 1 15.19 ? C3 IOL 192 B 1 HETATM 3 C C4 IOL . . . H 3 -4.704 1.577 -56.225 1 14.61 ? C4 IOL 192 B 1 HETATM 4 O O4 IOL . . . H 3 -4.045 1.49 -57.408 1 15.94 ? O4 IOL 192 B 1 HETATM 5 C C5 IOL . . . H 3 -5.594 2.624 -55.989 1 14.59 ? C5 IOL 192 B 1 HETATM 6 C C6 IOL . . . H 3 -6.276 2.71 -54.767 1 14 ? C6 IOL 192 B 1 HETATM 7 C C1 IOL . . . H 3 -6.052 1.74 -53.781 1 14.6 ? C1 IOL 192 B 1 HETATM 8 I I1 IOL . . . H 3 -7.061 1.832 -51.953 0.55 11.32 ? I1 IOL 192 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #