data_3LBK # _model_server_result.job_id xfK0-y_54oEiNwFeO4s_Gg _model_server_result.datetime_utc '2025-02-05 11:58:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lbk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3LBK # _exptl.entry_id 3LBK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 462.327 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '6-chloro-3-[1-(4-chlorobenzyl)-4-phenyl-1H-imidazol-5-yl]-1H-indole-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LBK _cell.length_a 60.46 _cell.length_b 60.46 _cell.length_c 48.05 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LBK _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 60.46 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H17 Cl2 N3 O2' _chem_comp.formula_weight 462.327 _chem_comp.id K23 _chem_comp.mon_nstd_flag . _chem_comp.name '6-chloro-3-[1-(4-chlorobenzyl)-4-phenyl-1H-imidazol-5-yl]-1H-indole-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 CL2 K23 sing 173 n n C1 C3 K23 doub 174 n y C1 C7 K23 sing 175 n y C3 C4 K23 sing 176 n y C4 C5 K23 doub 177 n y C5 C6 K23 sing 178 n y C5 C13 K23 sing 179 n y C6 C7 K23 doub 180 n y C6 N8 K23 sing 181 n y N8 C9 K23 sing 182 n y C9 C10 K23 sing 183 n n C9 C13 K23 doub 184 n y C10 O11 K23 sing 185 n n C10 O12 K23 doub 186 n n C13 C14 K23 sing 187 n y C14 C15 K23 doub 188 n y C14 N24 K23 sing 189 n y C15 C16 K23 sing 190 n y C15 N22 K23 sing 191 n y C16 C17 K23 doub 192 n y C16 C21 K23 sing 193 n y C17 C18 K23 sing 194 n y C18 C19 K23 doub 195 n y C19 C20 K23 sing 196 n y C20 C21 K23 doub 197 n y N22 C23 K23 doub 198 n y C23 N24 K23 sing 199 n y N24 C25 K23 sing 200 n n C25 C26 K23 sing 201 n n C26 C27 K23 doub 202 n y C26 C32 K23 sing 203 n y C27 C28 K23 sing 204 n y C28 C29 K23 doub 205 n y C29 CL30 K23 sing 206 n n C29 C31 K23 sing 207 n y C31 C32 K23 doub 208 n y C3 H3 K23 sing 209 n n C4 H4 K23 sing 210 n n C7 H7 K23 sing 211 n n N8 HN8 K23 sing 212 n n O11 HO11 K23 sing 213 n n C17 H17 K23 sing 214 n n C18 H18 K23 sing 215 n n C19 H19 K23 sing 216 n n C20 H20 K23 sing 217 n n C21 H21 K23 sing 218 n n C23 H23 K23 sing 219 n n C25 H25 K23 sing 220 n n C25 H25A K23 sing 221 n n C27 H27 K23 sing 222 n n C28 H28 K23 sing 223 n n C31 H31 K23 sing 224 n n C32 H32 K23 sing 225 n n # _atom_sites.entry_id 3LBK _atom_sites.fract_transf_matrix[1][1] 0.01654 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01654 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020812 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K23 A 1 1 1 K23 K23 . C 3 SO4 A 1 112 1 SO4 SO4 . D 4 HOH A 1 4 4 HOH HOH . D 4 HOH A 2 5 5 HOH HOH . D 4 HOH A 3 7 7 HOH HOH . D 4 HOH A 4 8 8 HOH HOH . D 4 HOH A 5 9 9 HOH HOH . D 4 HOH A 6 10 10 HOH HOH . D 4 HOH A 7 11 11 HOH HOH . D 4 HOH A 8 12 12 HOH HOH . D 4 HOH A 9 13 13 HOH HOH . D 4 HOH A 10 14 14 HOH HOH . D 4 HOH A 11 15 15 HOH HOH . D 4 HOH A 12 16 16 HOH HOH . D 4 HOH A 13 113 18 HOH HOH . D 4 HOH A 14 114 19 HOH HOH . D 4 HOH A 15 115 20 HOH HOH . D 4 HOH A 16 116 22 HOH HOH . D 4 HOH A 17 1001 1001 HOH HOH . D 4 HOH A 18 1002 24 HOH HOH . D 4 HOH A 19 1003 1003 HOH HOH . D 4 HOH A 20 1007 1007 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 K23 . . . B 2 19.389 15.124 3.363 1 27.24 ? C1 K23 1 A 1 HETATM 2 CL CL2 K23 . . . B 2 19.838 13.723 4.262 1 27.99 ? CL2 K23 1 A 1 HETATM 3 C C3 K23 . . . B 2 19.663 16.395 3.778 1 25.59 ? C3 K23 1 A 1 HETATM 4 C C4 K23 . . . B 2 19.28 17.487 3.014 1 27.73 ? C4 K23 1 A 1 HETATM 5 C C5 K23 . . . B 2 18.604 17.292 1.815 1 32.73 ? C5 K23 1 A 1 HETATM 6 C C6 K23 . . . B 2 18.343 15.998 1.401 1 31.78 ? C6 K23 1 A 1 HETATM 7 C C7 K23 . . . B 2 18.735 14.918 2.164 1 30.7 ? C7 K23 1 A 1 HETATM 8 N N8 K23 . . . B 2 17.703 16.03 0.264 1 32.66 ? N8 K23 1 A 1 HETATM 9 C C9 K23 . . . B 2 17.548 17.296 -0.113 1 36.54 ? C9 K23 1 A 1 HETATM 10 C C10 K23 . . . B 2 16.808 17.596 -1.436 1 38.26 ? C10 K23 1 A 1 HETATM 11 O O11 K23 . . . B 2 16.134 16.659 -1.901 1 43.48 ? O11 K23 1 A 1 HETATM 12 O O12 K23 . . . B 2 16.859 18.705 -1.968 1 40.59 ? O12 K23 1 A 1 HETATM 13 C C13 K23 . . . B 2 18.053 18.134 0.861 1 33.83 ? C13 K23 1 A 1 HETATM 14 C C14 K23 . . . B 2 18.161 19.526 0.91 1 37.99 ? C14 K23 1 A 1 HETATM 15 C C15 K23 . . . B 2 17.511 20.448 1.751 1 39.15 ? C15 K23 1 A 1 HETATM 16 C C16 K23 . . . B 2 16.529 20.219 2.706 1 42.05 ? C16 K23 1 A 1 HETATM 17 C C17 K23 . . . B 2 16.575 20.918 3.899 1 45.36 ? C17 K23 1 A 1 HETATM 18 C C18 K23 . . . B 2 15.607 20.762 4.874 1 45.95 ? C18 K23 1 A 1 HETATM 19 C C19 K23 . . . B 2 14.539 19.915 4.642 1 47.27 ? C19 K23 1 A 1 HETATM 20 C C20 K23 . . . B 2 14.472 19.234 3.434 1 46.15 ? C20 K23 1 A 1 HETATM 21 C C21 K23 . . . B 2 15.461 19.391 2.473 1 42.78 ? C21 K23 1 A 1 HETATM 22 N N22 K23 . . . B 2 17.972 21.675 1.475 1 37.86 ? N22 K23 1 A 1 HETATM 23 C C23 K23 . . . B 2 18.884 21.563 0.51 1 39.86 ? C23 K23 1 A 1 HETATM 24 N N24 K23 . . . B 2 19.005 20.267 0.191 1 39.34 ? N24 K23 1 A 1 HETATM 25 C C25 K23 . . . B 2 19.881 19.741 -0.846 1 36.27 ? C25 K23 1 A 1 HETATM 26 C C26 K23 . . . B 2 21.033 18.967 -0.296 1 36.17 ? C26 K23 1 A 1 HETATM 27 C C27 K23 . . . B 2 21.404 17.807 -0.941 1 35.43 ? C27 K23 1 A 1 HETATM 28 C C28 K23 . . . B 2 22.466 17.081 -0.443 1 36.25 ? C28 K23 1 A 1 HETATM 29 C C29 K23 . . . B 2 23.134 17.512 0.668 1 38.02 ? C29 K23 1 A 1 HETATM 30 CL CL30 K23 . . . B 2 24.473 16.601 1.207 1 41.87 ? CL30 K23 1 A 1 HETATM 31 C C31 K23 . . . B 2 22.774 18.682 1.327 1 37.79 ? C31 K23 1 A 1 HETATM 32 C C32 K23 . . . B 2 21.7 19.405 0.833 1 37.11 ? C32 K23 1 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 32 #