data_3LBW # _model_server_result.job_id wmIXmQLZwawtT0eoUIGEMQ _model_server_result.datetime_utc '2024-11-04 22:48:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lbw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":49}' # _entry.id 3LBW # _exptl.entry_id 3LBW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LBW _cell.length_a 48.665 _cell.length_b 79.091 _cell.length_c 48.559 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LBW _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 J N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 E C7 Z82 . A Z82 24 1_555 A N PRO 1 A PRO 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale2 A C LEU 22 A LEU 46 1_555 A N NH2 23 A NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 G C7 Z82 . B Z82 24 1_555 B N PRO 1 B PRO 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale4 B C LEU 22 B LEU 46 1_555 B N NH2 23 B NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale5 I C7 Z82 . C Z82 24 1_555 C N PRO 1 C PRO 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale6 C C LEU 22 C LEU 46 1_555 C N NH2 23 C NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale7 L C7 Z82 . D Z82 24 1_555 D N PRO 1 D PRO 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale8 D C LEU 22 D LEU 46 1_555 D N NH2 23 D NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 130 n n C1 C2 PEG sing 131 n n C1 H11 PEG sing 132 n n C1 H12 PEG sing 133 n n O1 HO1 PEG sing 134 n n C2 O2 PEG sing 135 n n C2 H21 PEG sing 136 n n C2 H22 PEG sing 137 n n O2 C3 PEG sing 138 n n C3 C4 PEG sing 139 n n C3 H31 PEG sing 140 n n C3 H32 PEG sing 141 n n C4 O4 PEG sing 142 n n C4 H41 PEG sing 143 n n C4 H42 PEG sing 144 n n O4 HO4 PEG sing 145 n n # _atom_sites.entry_id 3LBW _atom_sites.fract_transf_matrix[1][1] 0.020549 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012644 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020594 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 Z82 A 1 24 24 Z82 Z82 . F 3 PEG A 1 48 48 PEG PEG . G 2 Z82 B 1 24 24 Z82 Z82 . H 4 XYL B 1 48 48 XYL XYL . I 2 Z82 C 1 24 24 Z82 Z82 . J 3 PEG C 1 49 49 PEG PEG . K 3 PEG C 1 50 50 PEG PEG . L 2 Z82 D 1 24 24 Z82 Z82 . M 5 HOH A 1 100 100 HOH HOH . M 5 HOH A 2 101 101 HOH HOH . M 5 HOH A 3 102 102 HOH HOH . M 5 HOH A 4 103 103 HOH HOH . N 5 HOH B 1 104 104 HOH HOH . N 5 HOH B 2 105 105 HOH HOH . N 5 HOH B 3 106 106 HOH HOH . N 5 HOH B 4 107 107 HOH HOH . N 5 HOH B 5 108 108 HOH HOH . N 5 HOH B 6 109 109 HOH HOH . N 5 HOH B 7 110 110 HOH HOH . N 5 HOH B 8 111 111 HOH HOH . N 5 HOH B 9 112 112 HOH HOH . N 5 HOH B 10 113 113 HOH HOH . O 5 HOH C 1 114 114 HOH HOH . O 5 HOH C 2 115 115 HOH HOH . O 5 HOH C 3 116 116 HOH HOH . O 5 HOH C 4 117 117 HOH HOH . O 5 HOH C 5 118 118 HOH HOH . P 5 HOH D 1 119 119 HOH HOH . P 5 HOH D 2 120 120 HOH HOH . P 5 HOH D 3 121 121 HOH HOH . P 5 HOH D 4 122 122 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . J 3 -11.92 -3.75 -0.713 1 52.38 ? C1 PEG 49 C 1 HETATM 2 O O1 PEG . . . J 3 -11.099 -4.575 0.123 1 52.32 ? O1 PEG 49 C 1 HETATM 3 C C2 PEG . . . J 3 -13.226 -3.434 0.006 1 52.48 ? C2 PEG 49 C 1 HETATM 4 O O2 PEG . . . J 3 -14.323 -3.656 -0.88 1 52.63 ? O2 PEG 49 C 1 HETATM 5 C C3 PEG . . . J 3 -15.493 -4.068 -0.176 1 52.74 ? C3 PEG 49 C 1 HETATM 6 C C4 PEG . . . J 3 -16.664 -3.159 -0.529 1 52.84 ? C4 PEG 49 C 1 HETATM 7 O O4 PEG . . . J 3 -17.861 -3.707 0.034 1 53.25 ? O4 PEG 49 C 1 # _model_server_stats.io_time_ms 4 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #