data_3LCO
#
_model_server_result.job_id            KZeq8dq-RmnpKnNYIskShw 
_model_server_result.datetime_utc      '2024-10-16 10:36:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3lco 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":999}' 
#
_entry.id    3LCO 
#
_exptl.entry_id    3LCO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              448.474 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-({4-methoxy-5-[(4-methoxybenzyl)oxy]pyridin-2-yl}methoxy)-5-(1-methyl-1H-pyrazol-4-yl)pyrazin-2-amine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3LCO 
_cell.length_a            62.916 
_cell.length_b            62.916 
_cell.length_c            183.943 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3LCO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C23 H24 N6 O4' 
_chem_comp.formula_weight    448.474 
_chem_comp.id                LC0 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-({4-methoxy-5-[(4-methoxybenzyl)oxy]pyridin-2-yl}methoxy)-5-(1-methyl-1H-pyrazol-4-yl)pyrazin-2-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C4 C6 LC0 doub 171 n y 
C4 C15 LC0 sing 172 n y 
C5 C7 LC0 sing 173 n y 
C5 C15 LC0 doub 174 n y 
C6 C16 LC0 sing 175 n y 
C7 C16 LC0 doub 176 n y 
C8 C17 LC0 doub 177 n y 
C8 C18 LC0 sing 178 n y 
C10 C20 LC0 sing 179 n y 
C10 N25 LC0 doub 180 n y 
C13 C15 LC0 sing 181 n n 
C13 O32 LC0 sing 182 n n 
C17 C14 LC0 sing 183 n n 
C17 N25 LC0 sing 184 n y 
C20 C18 LC0 doub 185 n y 
C20 O32 LC0 sing 186 n n 
C21 C11 LC0 doub 187 n y 
C21 C19 LC0 sing 188 n y 
C21 N28 LC0 sing 189 n y 
C22 C23 LC0 sing 190 n y 
C22 N24 LC0 sing 191 n n 
C22 N26 LC0 doub 192 n y 
C1 N29 LC0 sing 193 n n 
C2 O30 LC0 sing 194 n n 
C3 O31 LC0 sing 195 n n 
C9 C19 LC0 sing 196 n y 
C9 N27 LC0 doub 197 n y 
C11 N26 LC0 sing 198 n y 
C12 C19 LC0 doub 199 n y 
C12 N29 LC0 sing 200 n y 
C14 O33 LC0 sing 201 n n 
C16 O30 LC0 sing 202 n n 
C18 O31 LC0 sing 203 n n 
C23 N28 LC0 doub 204 n y 
C23 O33 LC0 sing 205 n n 
N27 N29 LC0 sing 206 n y 
C4 H4 LC0 sing 207 n n 
C5 H5 LC0 sing 208 n n 
C6 H6 LC0 sing 209 n n 
C7 H7 LC0 sing 210 n n 
C8 H8 LC0 sing 211 n n 
C10 H10 LC0 sing 212 n n 
C13 H13 LC0 sing 213 n n 
C13 H13A LC0 sing 214 n n 
C1 H1 LC0 sing 215 n n 
C1 H1A LC0 sing 216 n n 
C1 H1B LC0 sing 217 n n 
C2 H2 LC0 sing 218 n n 
C2 H2A LC0 sing 219 n n 
C2 H2B LC0 sing 220 n n 
C3 H3 LC0 sing 221 n n 
C3 H3A LC0 sing 222 n n 
C3 H3B LC0 sing 223 n n 
C9 H9 LC0 sing 224 n n 
C11 H11 LC0 sing 225 n n 
C12 H12 LC0 sing 226 n n 
C14 H14 LC0 sing 227 n n 
C14 H14A LC0 sing 228 n n 
N24 HN24 LC0 sing 229 n n 
N24 HN2A LC0 sing 230 n n 
#
_atom_sites.entry_id                     3LCO 
_atom_sites.fract_transf_matrix[1][1]    0.015894 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015894 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005436 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           LC0 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      999 
_pdbx_nonpoly_scheme.auth_seq_num     999 
_pdbx_nonpoly_scheme.pdb_mon_id       LC0 
_pdbx_nonpoly_scheme.auth_mon_id      LIG 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 LC0 . . . B 2 -9.7 21.615 -15.052 1 59.99 ? C4 LC0 999 A 1 
HETATM 2 C C5 LC0 . . . B 2 -10.611 19.417 -15.228 1 60.02 ? C5 LC0 999 A 1 
HETATM 3 C C6 LC0 . . . B 2 -10.66 21.941 -14.119 1 59.96 ? C6 LC0 999 A 1 
HETATM 4 C C7 LC0 . . . B 2 -11.576 19.732 -14.297 1 59.95 ? C7 LC0 999 A 1 
HETATM 5 C C8 LC0 . . . B 2 -4.934 17.836 -16.956 1 60.07 ? C8 LC0 999 A 1 
HETATM 6 C C10 LC0 . . . B 2 -7.12 18.023 -18.529 1 59.97 ? C10 LC0 999 A 1 
HETATM 7 C C13 LC0 . . . B 2 -8.626 20.01 -16.618 1 59.9 ? C13 LC0 999 A 1 
HETATM 8 C C15 LC0 . . . B 2 -9.671 20.353 -15.608 1 60 ? C15 LC0 999 A 1 
HETATM 9 C C17 LC0 . . . B 2 -4.898 17.611 -18.314 1 60.13 ? C17 LC0 999 A 1 
HETATM 10 C C20 LC0 . . . B 2 -7.254 18.273 -17.181 1 59.94 ? C20 LC0 999 A 1 
HETATM 11 C C21 LC0 . . . B 2 0.215 17.944 -18.784 1 59.95 ? C21 LC0 999 A 1 
HETATM 12 C C22 LC0 . . . B 2 -1.526 19.873 -19.266 1 59.98 ? C22 LC0 999 A 1 
HETATM 13 C C1 LC0 . . . B 2 4.488 15.58 -18.203 1 60 ? C1 LC0 999 A 1 
HETATM 14 C C2 LC0 . . . B 2 -12.046 20.894 -11.555 1 59.75 ? C2 LC0 999 A 1 
HETATM 15 C C3 LC0 . . . B 2 -4.93 18.608 -14.53 1 60.14 ? C3 LC0 999 A 1 
HETATM 16 C C9 LC0 . . . B 2 1.011 15.619 -17.983 1 60.04 ? C9 LC0 999 A 1 
HETATM 17 C C11 LC0 . . . B 2 0.548 19.271 -18.643 1 59.98 ? C11 LC0 999 A 1 
HETATM 18 C C12 LC0 . . . B 2 2.543 17.086 -18.637 1 60.05 ? C12 LC0 999 A 1 
HETATM 19 C C14 LC0 . . . B 2 -3.59 17.241 -18.922 1 60.17 ? C14 LC0 999 A 1 
HETATM 20 C C16 LC0 . . . B 2 -11.59 20.995 -13.745 1 59.92 ? C16 LC0 999 A 1 
HETATM 21 C C18 LC0 . . . B 2 -6.139 18.173 -16.379 1 60.03 ? C18 LC0 999 A 1 
HETATM 22 C C19 LC0 . . . B 2 1.186 16.93 -18.487 1 60 ? C19 LC0 999 A 1 
HETATM 23 C C23 LC0 . . . B 2 -1.845 18.541 -19.407 1 59.99 ? C23 LC0 999 A 1 
HETATM 24 N N24 LC0 . . . B 2 -2.514 20.822 -19.541 1 59.91 ? N24 LC0 999 A 1 
HETATM 25 N N25 LC0 . . . B 2 -5.965 17.694 -19.119 1 60.05 ? N25 LC0 999 A 1 
HETATM 26 N N26 LC0 . . . B 2 -0.31 20.266 -18.877 1 60.04 ? N26 LC0 999 A 1 
HETATM 27 N N27 LC0 . . . B 2 2.177 14.986 -17.824 1 60.11 ? N27 LC0 999 A 1 
HETATM 28 N N28 LC0 . . . B 2 -0.995 17.535 -19.173 1 59.95 ? N28 LC0 999 A 1 
HETATM 29 N N29 LC0 . . . B 2 3.077 15.897 -18.23 1 60.11 ? N29 LC0 999 A 1 
HETATM 30 O O30 LC0 . . . B 2 -12.558 21.32 -12.812 1 59.84 ? O30 LC0 999 A 1 
HETATM 31 O O31 LC0 . . . B 2 -6.25 18.412 -15.021 1 60.11 ? O31 LC0 999 A 1 
HETATM 32 O O32 LC0 . . . B 2 -8.489 18.595 -16.648 1 59.84 ? O32 LC0 999 A 1 
HETATM 33 O O33 LC0 . . . B 2 -3.135 18.246 -19.816 1 60.09 ? O33 LC0 999 A 1 
#
_model_server_stats.io_time_ms              54 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           33 
#