data_3LD9 # _model_server_result.job_id tcJGTFeUv8IwSp335UpOow _model_server_result.datetime_utc '2024-11-07 10:43:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ld9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":300}' # _entry.id 3LD9 # _exptl.entry_id 3LD9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LD9 _cell.length_a 39.17 _cell.length_b 144.82 _cell.length_c 146.84 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LD9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 H N N ? 2 I N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 299 n n S O2 SO4 doub 300 n n S O3 SO4 sing 301 n n S O4 SO4 sing 302 n n # _atom_sites.entry_id 3LD9 _atom_sites.fract_transf_matrix[1][1] 0.02553 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006905 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00681 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 A 1 300 300 SO4 SO4 . F 2 SO4 B 1 300 300 SO4 SO4 . G 3 EDO B 1 301 301 EDO EDO . H 2 SO4 C 1 300 300 SO4 SO4 . I 2 SO4 D 1 300 300 SO4 SO4 . J 3 EDO D 1 301 301 EDO EDO . K 4 HOH A 1 203 7 HOH HOH . K 4 HOH A 2 204 15 HOH HOH . K 4 HOH A 3 205 19 HOH HOH . K 4 HOH A 4 206 24 HOH HOH . K 4 HOH A 5 207 25 HOH HOH . K 4 HOH A 6 208 27 HOH HOH . K 4 HOH A 7 209 33 HOH HOH . K 4 HOH A 8 210 37 HOH HOH . K 4 HOH A 9 211 42 HOH HOH . K 4 HOH A 10 212 45 HOH HOH . K 4 HOH A 11 213 52 HOH HOH . K 4 HOH A 12 214 54 HOH HOH . K 4 HOH A 13 215 215 HOH HOH . K 4 HOH A 14 216 216 HOH HOH . K 4 HOH A 15 217 217 HOH HOH . K 4 HOH A 16 218 218 HOH HOH . K 4 HOH A 17 219 219 HOH HOH . K 4 HOH A 18 220 220 HOH HOH . K 4 HOH A 19 221 221 HOH HOH . K 4 HOH A 20 222 222 HOH HOH . K 4 HOH A 21 223 223 HOH HOH . K 4 HOH A 22 224 224 HOH HOH . K 4 HOH A 23 225 225 HOH HOH . K 4 HOH A 24 226 226 HOH HOH . K 4 HOH A 25 227 57 HOH HOH . K 4 HOH A 26 228 59 HOH HOH . K 4 HOH A 27 229 82 HOH HOH . K 4 HOH A 28 230 86 HOH HOH . K 4 HOH A 29 231 89 HOH HOH . K 4 HOH A 30 232 90 HOH HOH . K 4 HOH A 31 233 95 HOH HOH . K 4 HOH A 32 234 103 HOH HOH . K 4 HOH A 33 235 104 HOH HOH . K 4 HOH A 34 236 236 HOH HOH . K 4 HOH A 35 237 106 HOH HOH . K 4 HOH A 36 238 114 HOH HOH . K 4 HOH A 37 239 115 HOH HOH . K 4 HOH A 38 240 118 HOH HOH . K 4 HOH A 39 241 121 HOH HOH . K 4 HOH A 40 242 122 HOH HOH . K 4 HOH A 41 243 126 HOH HOH . K 4 HOH A 42 244 127 HOH HOH . K 4 HOH A 43 245 128 HOH HOH . K 4 HOH A 44 246 246 HOH HOH . K 4 HOH A 45 247 129 HOH HOH . K 4 HOH A 46 248 130 HOH HOH . K 4 HOH A 47 249 133 HOH HOH . K 4 HOH A 48 250 140 HOH HOH . K 4 HOH A 49 251 145 HOH HOH . K 4 HOH A 50 252 150 HOH HOH . K 4 HOH A 51 253 151 HOH HOH . K 4 HOH A 52 254 162 HOH HOH . K 4 HOH A 53 255 163 HOH HOH . K 4 HOH A 54 256 167 HOH HOH . K 4 HOH A 55 257 169 HOH HOH . K 4 HOH A 56 258 170 HOH HOH . K 4 HOH A 57 259 171 HOH HOH . K 4 HOH A 58 260 172 HOH HOH . K 4 HOH A 59 261 174 HOH HOH . K 4 HOH A 60 262 176 HOH HOH . K 4 HOH A 61 263 178 HOH HOH . K 4 HOH A 62 264 192 HOH HOH . K 4 HOH A 63 265 197 HOH HOH . K 4 HOH A 64 270 270 HOH HOH . K 4 HOH A 65 271 271 HOH HOH . K 4 HOH A 66 272 272 HOH HOH . K 4 HOH A 67 273 273 HOH HOH . K 4 HOH A 68 274 274 HOH HOH . K 4 HOH A 69 275 275 HOH HOH . K 4 HOH A 70 276 276 HOH HOH . K 4 HOH A 71 277 277 HOH HOH . K 4 HOH A 72 278 278 HOH HOH . K 4 HOH A 73 301 301 HOH HOH . L 4 HOH B 1 203 203 HOH HOH . L 4 HOH B 2 204 204 HOH HOH . L 4 HOH B 3 205 205 HOH HOH . L 4 HOH B 4 206 206 HOH HOH . L 4 HOH B 5 207 2 HOH HOH . L 4 HOH B 6 208 8 HOH HOH . L 4 HOH B 7 209 12 HOH HOH . L 4 HOH B 8 210 13 HOH HOH . L 4 HOH B 9 211 16 HOH HOH . L 4 HOH B 10 212 18 HOH HOH . L 4 HOH B 11 213 22 HOH HOH . L 4 HOH B 12 214 28 HOH HOH . L 4 HOH B 13 215 31 HOH HOH . L 4 HOH B 14 216 35 HOH HOH . L 4 HOH B 15 217 36 HOH HOH . L 4 HOH B 16 218 40 HOH HOH . L 4 HOH B 17 219 44 HOH HOH . L 4 HOH B 18 220 48 HOH HOH . L 4 HOH B 19 221 56 HOH HOH . L 4 HOH B 20 222 60 HOH HOH . L 4 HOH B 21 223 61 HOH HOH . L 4 HOH B 22 224 62 HOH HOH . L 4 HOH B 23 225 68 HOH HOH . L 4 HOH B 24 226 69 HOH HOH . L 4 HOH B 25 227 227 HOH HOH . L 4 HOH B 26 228 228 HOH HOH . L 4 HOH B 27 229 229 HOH HOH . L 4 HOH B 28 230 230 HOH HOH . L 4 HOH B 29 231 231 HOH HOH . L 4 HOH B 30 232 232 HOH HOH . L 4 HOH B 31 233 233 HOH HOH . L 4 HOH B 32 234 234 HOH HOH . L 4 HOH B 33 235 71 HOH HOH . L 4 HOH B 34 236 73 HOH HOH . L 4 HOH B 35 237 237 HOH HOH . L 4 HOH B 36 238 238 HOH HOH . L 4 HOH B 37 239 239 HOH HOH . L 4 HOH B 38 240 240 HOH HOH . L 4 HOH B 39 241 241 HOH HOH . L 4 HOH B 40 242 242 HOH HOH . L 4 HOH B 41 243 243 HOH HOH . L 4 HOH B 42 244 244 HOH HOH . L 4 HOH B 43 245 245 HOH HOH . L 4 HOH B 44 246 75 HOH HOH . L 4 HOH B 45 247 247 HOH HOH . L 4 HOH B 46 248 77 HOH HOH . L 4 HOH B 47 249 80 HOH HOH . L 4 HOH B 48 250 83 HOH HOH . L 4 HOH B 49 251 84 HOH HOH . L 4 HOH B 50 252 85 HOH HOH . L 4 HOH B 51 253 94 HOH HOH . L 4 HOH B 52 254 96 HOH HOH . L 4 HOH B 53 255 105 HOH HOH . L 4 HOH B 54 256 107 HOH HOH . L 4 HOH B 55 257 108 HOH HOH . L 4 HOH B 56 258 111 HOH HOH . L 4 HOH B 57 259 113 HOH HOH . L 4 HOH B 58 260 117 HOH HOH . L 4 HOH B 59 261 124 HOH HOH . L 4 HOH B 60 262 135 HOH HOH . L 4 HOH B 61 263 137 HOH HOH . L 4 HOH B 62 264 141 HOH HOH . L 4 HOH B 63 265 148 HOH HOH . L 4 HOH B 64 266 149 HOH HOH . L 4 HOH B 65 267 155 HOH HOH . L 4 HOH B 66 268 157 HOH HOH . L 4 HOH B 67 269 269 HOH HOH . L 4 HOH B 68 270 159 HOH HOH . L 4 HOH B 69 271 164 HOH HOH . L 4 HOH B 70 272 166 HOH HOH . L 4 HOH B 71 273 168 HOH HOH . L 4 HOH B 72 274 177 HOH HOH . L 4 HOH B 73 275 181 HOH HOH . L 4 HOH B 74 276 182 HOH HOH . L 4 HOH B 75 277 190 HOH HOH . L 4 HOH B 76 278 194 HOH HOH . L 4 HOH B 77 279 279 HOH HOH . L 4 HOH B 78 280 280 HOH HOH . L 4 HOH B 79 281 281 HOH HOH . L 4 HOH B 80 282 282 HOH HOH . L 4 HOH B 81 283 283 HOH HOH . L 4 HOH B 82 284 199 HOH HOH . L 4 HOH B 83 285 200 HOH HOH . L 4 HOH B 84 286 201 HOH HOH . L 4 HOH B 85 287 287 HOH HOH . L 4 HOH B 86 288 202 HOH HOH . M 4 HOH C 1 203 1 HOH HOH . M 4 HOH C 2 204 4 HOH HOH . M 4 HOH C 3 205 10 HOH HOH . M 4 HOH C 4 206 11 HOH HOH . M 4 HOH C 5 207 207 HOH HOH . M 4 HOH C 6 208 208 HOH HOH . M 4 HOH C 7 209 14 HOH HOH . M 4 HOH C 8 210 23 HOH HOH . M 4 HOH C 9 211 38 HOH HOH . M 4 HOH C 10 212 47 HOH HOH . M 4 HOH C 11 213 49 HOH HOH . M 4 HOH C 12 214 70 HOH HOH . M 4 HOH C 13 215 79 HOH HOH . M 4 HOH C 14 216 97 HOH HOH . M 4 HOH C 15 217 100 HOH HOH . M 4 HOH C 16 218 109 HOH HOH . M 4 HOH C 17 219 110 HOH HOH . M 4 HOH C 18 220 112 HOH HOH . M 4 HOH C 19 221 116 HOH HOH . M 4 HOH C 20 222 120 HOH HOH . M 4 HOH C 21 223 123 HOH HOH . M 4 HOH C 22 224 136 HOH HOH . M 4 HOH C 23 225 146 HOH HOH . M 4 HOH C 24 226 165 HOH HOH . M 4 HOH C 25 227 173 HOH HOH . M 4 HOH C 26 228 175 HOH HOH . M 4 HOH C 27 229 183 HOH HOH . M 4 HOH C 28 230 184 HOH HOH . M 4 HOH C 29 231 185 HOH HOH . M 4 HOH C 30 232 187 HOH HOH . M 4 HOH C 31 233 188 HOH HOH . M 4 HOH C 32 234 196 HOH HOH . M 4 HOH C 33 235 235 HOH HOH . M 4 HOH C 34 248 248 HOH HOH . M 4 HOH C 35 249 249 HOH HOH . M 4 HOH C 36 250 250 HOH HOH . M 4 HOH C 37 251 251 HOH HOH . M 4 HOH C 38 252 252 HOH HOH . M 4 HOH C 39 253 253 HOH HOH . M 4 HOH C 40 254 254 HOH HOH . M 4 HOH C 41 255 255 HOH HOH . M 4 HOH C 42 285 285 HOH HOH . M 4 HOH C 43 286 286 HOH HOH . M 4 HOH C 44 288 288 HOH HOH . M 4 HOH C 45 290 290 HOH HOH . N 4 HOH D 1 203 3 HOH HOH . N 4 HOH D 2 204 5 HOH HOH . N 4 HOH D 3 205 6 HOH HOH . N 4 HOH D 4 206 9 HOH HOH . N 4 HOH D 5 207 17 HOH HOH . N 4 HOH D 6 208 20 HOH HOH . N 4 HOH D 7 209 209 HOH HOH . N 4 HOH D 8 210 210 HOH HOH . N 4 HOH D 9 211 211 HOH HOH . N 4 HOH D 10 212 212 HOH HOH . N 4 HOH D 11 213 213 HOH HOH . N 4 HOH D 12 214 214 HOH HOH . N 4 HOH D 13 215 21 HOH HOH . N 4 HOH D 14 216 26 HOH HOH . N 4 HOH D 15 217 29 HOH HOH . N 4 HOH D 16 218 30 HOH HOH . N 4 HOH D 17 219 32 HOH HOH . N 4 HOH D 18 220 34 HOH HOH . N 4 HOH D 19 221 39 HOH HOH . N 4 HOH D 20 222 41 HOH HOH . N 4 HOH D 21 223 43 HOH HOH . N 4 HOH D 22 224 46 HOH HOH . N 4 HOH D 23 225 50 HOH HOH . N 4 HOH D 24 226 51 HOH HOH . N 4 HOH D 25 227 53 HOH HOH . N 4 HOH D 26 228 55 HOH HOH . N 4 HOH D 27 229 58 HOH HOH . N 4 HOH D 28 230 63 HOH HOH . N 4 HOH D 29 231 64 HOH HOH . N 4 HOH D 30 232 65 HOH HOH . N 4 HOH D 31 233 66 HOH HOH . N 4 HOH D 32 234 67 HOH HOH . N 4 HOH D 33 235 72 HOH HOH . N 4 HOH D 34 236 74 HOH HOH . N 4 HOH D 35 237 76 HOH HOH . N 4 HOH D 36 238 78 HOH HOH . N 4 HOH D 37 239 81 HOH HOH . N 4 HOH D 38 240 87 HOH HOH . N 4 HOH D 39 241 88 HOH HOH . N 4 HOH D 40 242 91 HOH HOH . N 4 HOH D 41 243 92 HOH HOH . N 4 HOH D 42 244 93 HOH HOH . N 4 HOH D 43 245 98 HOH HOH . N 4 HOH D 44 246 99 HOH HOH . N 4 HOH D 45 247 101 HOH HOH . N 4 HOH D 46 248 102 HOH HOH . N 4 HOH D 47 249 119 HOH HOH . N 4 HOH D 48 250 125 HOH HOH . N 4 HOH D 49 251 131 HOH HOH . N 4 HOH D 50 252 132 HOH HOH . N 4 HOH D 51 253 134 HOH HOH . N 4 HOH D 52 254 138 HOH HOH . N 4 HOH D 53 255 139 HOH HOH . N 4 HOH D 54 256 256 HOH HOH . N 4 HOH D 55 257 257 HOH HOH . N 4 HOH D 56 258 258 HOH HOH . N 4 HOH D 57 259 259 HOH HOH . N 4 HOH D 58 260 260 HOH HOH . N 4 HOH D 59 261 261 HOH HOH . N 4 HOH D 60 262 262 HOH HOH . N 4 HOH D 61 263 263 HOH HOH . N 4 HOH D 62 264 264 HOH HOH . N 4 HOH D 63 265 265 HOH HOH . N 4 HOH D 64 266 266 HOH HOH . N 4 HOH D 65 267 267 HOH HOH . N 4 HOH D 66 268 268 HOH HOH . N 4 HOH D 67 269 142 HOH HOH . N 4 HOH D 68 270 143 HOH HOH . N 4 HOH D 69 271 144 HOH HOH . N 4 HOH D 70 272 147 HOH HOH . N 4 HOH D 71 273 152 HOH HOH . N 4 HOH D 72 274 153 HOH HOH . N 4 HOH D 73 275 154 HOH HOH . N 4 HOH D 74 276 156 HOH HOH . N 4 HOH D 75 277 158 HOH HOH . N 4 HOH D 76 278 160 HOH HOH . N 4 HOH D 77 279 161 HOH HOH . N 4 HOH D 78 280 179 HOH HOH . N 4 HOH D 79 281 180 HOH HOH . N 4 HOH D 80 282 186 HOH HOH . N 4 HOH D 81 283 189 HOH HOH . N 4 HOH D 82 284 284 HOH HOH . N 4 HOH D 83 285 191 HOH HOH . N 4 HOH D 84 286 193 HOH HOH . N 4 HOH D 85 287 195 HOH HOH . N 4 HOH D 86 288 198 HOH HOH . N 4 HOH D 87 289 289 HOH HOH . N 4 HOH D 88 290 300 HOH HOH . N 4 HOH D 89 291 291 HOH HOH . N 4 HOH D 90 292 292 HOH HOH . N 4 HOH D 91 293 293 HOH HOH . N 4 HOH D 92 294 294 HOH HOH . N 4 HOH D 93 295 295 HOH HOH . N 4 HOH D 94 296 296 HOH HOH . N 4 HOH D 95 297 297 HOH HOH . N 4 HOH D 96 298 298 HOH HOH . N 4 HOH D 97 299 299 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 2 25.259 -21.012 130.349 1 45.51 ? S SO4 300 B 1 HETATM 2 O O1 SO4 . . . F 2 25.067 -21.37 131.758 1 44.45 ? O1 SO4 300 B 1 HETATM 3 O O2 SO4 . . . F 2 24.177 -21.608 129.552 1 47.11 ? O2 SO4 300 B 1 HETATM 4 O O3 SO4 . . . F 2 25.226 -19.56 130.127 1 42.92 ? O3 SO4 300 B 1 HETATM 5 O O4 SO4 . . . F 2 26.536 -21.512 129.853 1 44.58 ? O4 SO4 300 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 41 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #