data_3LF6 # _model_server_result.job_id y4bT-LwO0-bF7jngBB9E2Q _model_server_result.datetime_utc '2024-11-25 10:37:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lf6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":163}' # _entry.id 3LF6 # _exptl.entry_id 3LF6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LF6 _cell.length_a 49.211 _cell.length_b 81.975 _cell.length_c 94.219 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LF6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 247 n n P O2 PO4 sing 248 n n P O3 PO4 sing 249 n n P O4 PO4 sing 250 n n # _atom_sites.entry_id 3LF6 _atom_sites.fract_transf_matrix[1][1] 0.020321 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012199 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010614 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 162 1 PO4 PO4 . D 2 PO4 A 1 163 2 PO4 PO4 . E 2 PO4 B 1 162 3 PO4 PO4 . F 3 HOH A 1 164 3 HOH HOH . F 3 HOH A 2 165 165 HOH HOH . F 3 HOH A 3 166 6 HOH HOH . F 3 HOH A 4 167 167 HOH HOH . F 3 HOH A 5 168 168 HOH HOH . F 3 HOH A 6 169 169 HOH HOH . F 3 HOH A 7 170 170 HOH HOH . F 3 HOH A 8 171 7 HOH HOH . F 3 HOH A 9 172 172 HOH HOH . F 3 HOH A 10 173 173 HOH HOH . F 3 HOH A 11 174 174 HOH HOH . F 3 HOH A 12 175 175 HOH HOH . F 3 HOH A 13 176 8 HOH HOH . F 3 HOH A 14 177 177 HOH HOH . F 3 HOH A 15 178 10 HOH HOH . F 3 HOH A 16 179 179 HOH HOH . F 3 HOH A 17 180 180 HOH HOH . F 3 HOH A 18 181 181 HOH HOH . F 3 HOH A 19 182 182 HOH HOH . F 3 HOH A 20 183 183 HOH HOH . F 3 HOH A 21 184 11 HOH HOH . F 3 HOH A 22 185 12 HOH HOH . F 3 HOH A 23 186 186 HOH HOH . F 3 HOH A 24 187 187 HOH HOH . F 3 HOH A 25 188 188 HOH HOH . F 3 HOH A 26 189 189 HOH HOH . F 3 HOH A 27 190 190 HOH HOH . F 3 HOH A 28 191 15 HOH HOH . F 3 HOH A 29 192 17 HOH HOH . F 3 HOH A 30 193 193 HOH HOH . F 3 HOH A 31 194 194 HOH HOH . F 3 HOH A 32 195 195 HOH HOH . F 3 HOH A 33 196 196 HOH HOH . F 3 HOH A 34 197 197 HOH HOH . F 3 HOH A 35 198 198 HOH HOH . F 3 HOH A 36 199 199 HOH HOH . F 3 HOH A 37 200 200 HOH HOH . F 3 HOH A 38 201 201 HOH HOH . F 3 HOH A 39 202 18 HOH HOH . F 3 HOH A 40 203 203 HOH HOH . F 3 HOH A 41 204 20 HOH HOH . F 3 HOH A 42 205 21 HOH HOH . F 3 HOH A 43 206 25 HOH HOH . F 3 HOH A 44 207 27 HOH HOH . F 3 HOH A 45 208 29 HOH HOH . F 3 HOH A 46 209 30 HOH HOH . F 3 HOH A 47 210 31 HOH HOH . F 3 HOH A 48 211 36 HOH HOH . F 3 HOH A 49 212 212 HOH HOH . F 3 HOH A 50 213 213 HOH HOH . F 3 HOH A 51 214 37 HOH HOH . F 3 HOH A 52 215 41 HOH HOH . F 3 HOH A 53 216 42 HOH HOH . F 3 HOH A 54 217 217 HOH HOH . F 3 HOH A 55 218 218 HOH HOH . F 3 HOH A 56 219 219 HOH HOH . F 3 HOH A 57 220 43 HOH HOH . F 3 HOH A 58 221 46 HOH HOH . F 3 HOH A 59 222 47 HOH HOH . F 3 HOH A 60 223 223 HOH HOH . F 3 HOH A 61 224 48 HOH HOH . F 3 HOH A 62 225 49 HOH HOH . F 3 HOH A 63 226 55 HOH HOH . F 3 HOH A 64 227 227 HOH HOH . F 3 HOH A 65 228 228 HOH HOH . F 3 HOH A 66 229 229 HOH HOH . F 3 HOH A 67 230 230 HOH HOH . F 3 HOH A 68 231 231 HOH HOH . F 3 HOH A 69 232 56 HOH HOH . F 3 HOH A 70 233 58 HOH HOH . F 3 HOH A 71 234 234 HOH HOH . F 3 HOH A 72 235 60 HOH HOH . F 3 HOH A 73 236 61 HOH HOH . F 3 HOH A 74 237 237 HOH HOH . F 3 HOH A 75 238 238 HOH HOH . F 3 HOH A 76 239 63 HOH HOH . F 3 HOH A 77 240 65 HOH HOH . F 3 HOH A 78 241 69 HOH HOH . F 3 HOH A 79 242 242 HOH HOH . F 3 HOH A 80 243 243 HOH HOH . F 3 HOH A 81 244 70 HOH HOH . F 3 HOH A 82 245 245 HOH HOH . F 3 HOH A 83 246 71 HOH HOH . F 3 HOH A 84 247 247 HOH HOH . F 3 HOH A 85 248 73 HOH HOH . F 3 HOH A 86 249 249 HOH HOH . F 3 HOH A 87 250 250 HOH HOH . F 3 HOH A 88 251 74 HOH HOH . F 3 HOH A 89 252 76 HOH HOH . F 3 HOH A 90 253 77 HOH HOH . F 3 HOH A 91 254 79 HOH HOH . F 3 HOH A 92 255 81 HOH HOH . F 3 HOH A 93 256 256 HOH HOH . F 3 HOH A 94 257 84 HOH HOH . F 3 HOH A 95 258 86 HOH HOH . F 3 HOH A 96 259 259 HOH HOH . F 3 HOH A 97 260 88 HOH HOH . F 3 HOH A 98 261 89 HOH HOH . F 3 HOH A 99 262 90 HOH HOH . F 3 HOH A 100 263 91 HOH HOH . F 3 HOH A 101 264 92 HOH HOH . F 3 HOH A 102 265 94 HOH HOH . F 3 HOH A 103 266 99 HOH HOH . F 3 HOH A 104 267 100 HOH HOH . F 3 HOH A 105 268 102 HOH HOH . F 3 HOH A 106 269 104 HOH HOH . F 3 HOH A 107 270 108 HOH HOH . F 3 HOH A 108 271 112 HOH HOH . F 3 HOH A 109 272 113 HOH HOH . F 3 HOH A 110 273 116 HOH HOH . F 3 HOH A 111 274 117 HOH HOH . F 3 HOH A 112 275 119 HOH HOH . F 3 HOH A 113 276 124 HOH HOH . F 3 HOH A 114 277 128 HOH HOH . F 3 HOH A 115 278 129 HOH HOH . F 3 HOH A 116 279 130 HOH HOH . F 3 HOH A 117 280 131 HOH HOH . F 3 HOH A 118 281 132 HOH HOH . F 3 HOH A 119 282 133 HOH HOH . F 3 HOH A 120 283 139 HOH HOH . F 3 HOH A 121 284 141 HOH HOH . F 3 HOH A 122 285 142 HOH HOH . F 3 HOH A 123 286 146 HOH HOH . F 3 HOH A 124 287 153 HOH HOH . F 3 HOH A 125 288 155 HOH HOH . F 3 HOH A 126 289 159 HOH HOH . F 3 HOH A 127 290 162 HOH HOH . F 3 HOH A 128 291 163 HOH HOH . G 3 HOH B 1 163 1 HOH HOH . G 3 HOH B 2 164 164 HOH HOH . G 3 HOH B 3 165 2 HOH HOH . G 3 HOH B 4 166 166 HOH HOH . G 3 HOH B 5 167 4 HOH HOH . G 3 HOH B 6 168 5 HOH HOH . G 3 HOH B 7 169 9 HOH HOH . G 3 HOH B 8 170 13 HOH HOH . G 3 HOH B 9 171 171 HOH HOH . G 3 HOH B 10 172 14 HOH HOH . G 3 HOH B 11 173 16 HOH HOH . G 3 HOH B 12 174 19 HOH HOH . G 3 HOH B 13 175 22 HOH HOH . G 3 HOH B 14 176 176 HOH HOH . G 3 HOH B 15 177 23 HOH HOH . G 3 HOH B 16 178 178 HOH HOH . G 3 HOH B 17 179 24 HOH HOH . G 3 HOH B 18 180 26 HOH HOH . G 3 HOH B 19 181 28 HOH HOH . G 3 HOH B 20 182 32 HOH HOH . G 3 HOH B 21 183 33 HOH HOH . G 3 HOH B 22 184 184 HOH HOH . G 3 HOH B 23 185 185 HOH HOH . G 3 HOH B 24 186 34 HOH HOH . G 3 HOH B 25 187 35 HOH HOH . G 3 HOH B 26 188 38 HOH HOH . G 3 HOH B 27 189 39 HOH HOH . G 3 HOH B 28 190 40 HOH HOH . G 3 HOH B 29 191 191 HOH HOH . G 3 HOH B 30 192 192 HOH HOH . G 3 HOH B 31 193 44 HOH HOH . G 3 HOH B 32 194 45 HOH HOH . G 3 HOH B 33 195 50 HOH HOH . G 3 HOH B 34 196 51 HOH HOH . G 3 HOH B 35 197 52 HOH HOH . G 3 HOH B 36 198 53 HOH HOH . G 3 HOH B 37 199 54 HOH HOH . G 3 HOH B 38 200 57 HOH HOH . G 3 HOH B 39 201 59 HOH HOH . G 3 HOH B 40 202 202 HOH HOH . G 3 HOH B 41 203 62 HOH HOH . G 3 HOH B 42 204 204 HOH HOH . G 3 HOH B 43 205 205 HOH HOH . G 3 HOH B 44 206 206 HOH HOH . G 3 HOH B 45 207 207 HOH HOH . G 3 HOH B 46 208 208 HOH HOH . G 3 HOH B 47 209 209 HOH HOH . G 3 HOH B 48 210 210 HOH HOH . G 3 HOH B 49 211 211 HOH HOH . G 3 HOH B 50 212 64 HOH HOH . G 3 HOH B 51 213 66 HOH HOH . G 3 HOH B 52 214 214 HOH HOH . G 3 HOH B 53 215 215 HOH HOH . G 3 HOH B 54 216 216 HOH HOH . G 3 HOH B 55 217 67 HOH HOH . G 3 HOH B 56 218 68 HOH HOH . G 3 HOH B 57 219 72 HOH HOH . G 3 HOH B 58 220 220 HOH HOH . G 3 HOH B 59 221 221 HOH HOH . G 3 HOH B 60 222 222 HOH HOH . G 3 HOH B 61 223 75 HOH HOH . G 3 HOH B 62 224 224 HOH HOH . G 3 HOH B 63 225 225 HOH HOH . G 3 HOH B 64 226 226 HOH HOH . G 3 HOH B 65 227 78 HOH HOH . G 3 HOH B 66 228 80 HOH HOH . G 3 HOH B 67 229 82 HOH HOH . G 3 HOH B 68 230 83 HOH HOH . G 3 HOH B 69 231 85 HOH HOH . G 3 HOH B 70 232 232 HOH HOH . G 3 HOH B 71 233 233 HOH HOH . G 3 HOH B 72 234 87 HOH HOH . G 3 HOH B 73 235 235 HOH HOH . G 3 HOH B 74 236 236 HOH HOH . G 3 HOH B 75 237 93 HOH HOH . G 3 HOH B 76 238 95 HOH HOH . G 3 HOH B 77 239 239 HOH HOH . G 3 HOH B 78 240 240 HOH HOH . G 3 HOH B 79 241 241 HOH HOH . G 3 HOH B 80 242 96 HOH HOH . G 3 HOH B 81 243 97 HOH HOH . G 3 HOH B 82 244 244 HOH HOH . G 3 HOH B 83 245 98 HOH HOH . G 3 HOH B 84 246 246 HOH HOH . G 3 HOH B 85 247 101 HOH HOH . G 3 HOH B 86 248 248 HOH HOH . G 3 HOH B 87 249 103 HOH HOH . G 3 HOH B 88 250 105 HOH HOH . G 3 HOH B 89 251 251 HOH HOH . G 3 HOH B 90 252 252 HOH HOH . G 3 HOH B 91 253 253 HOH HOH . G 3 HOH B 92 254 254 HOH HOH . G 3 HOH B 93 255 255 HOH HOH . G 3 HOH B 94 256 106 HOH HOH . G 3 HOH B 95 257 257 HOH HOH . G 3 HOH B 96 258 258 HOH HOH . G 3 HOH B 97 259 107 HOH HOH . G 3 HOH B 98 260 260 HOH HOH . G 3 HOH B 99 261 261 HOH HOH . G 3 HOH B 100 262 262 HOH HOH . G 3 HOH B 101 263 109 HOH HOH . G 3 HOH B 102 264 110 HOH HOH . G 3 HOH B 103 265 111 HOH HOH . G 3 HOH B 104 266 114 HOH HOH . G 3 HOH B 105 267 115 HOH HOH . G 3 HOH B 106 268 118 HOH HOH . G 3 HOH B 107 269 120 HOH HOH . G 3 HOH B 108 270 121 HOH HOH . G 3 HOH B 109 271 122 HOH HOH . G 3 HOH B 110 272 123 HOH HOH . G 3 HOH B 111 273 125 HOH HOH . G 3 HOH B 112 274 126 HOH HOH . G 3 HOH B 113 275 127 HOH HOH . G 3 HOH B 114 276 134 HOH HOH . G 3 HOH B 115 277 135 HOH HOH . G 3 HOH B 116 278 136 HOH HOH . G 3 HOH B 117 279 137 HOH HOH . G 3 HOH B 118 280 138 HOH HOH . G 3 HOH B 119 281 140 HOH HOH . G 3 HOH B 120 282 143 HOH HOH . G 3 HOH B 121 283 144 HOH HOH . G 3 HOH B 122 284 145 HOH HOH . G 3 HOH B 123 285 147 HOH HOH . G 3 HOH B 124 286 148 HOH HOH . G 3 HOH B 125 287 149 HOH HOH . G 3 HOH B 126 288 150 HOH HOH . G 3 HOH B 127 289 151 HOH HOH . G 3 HOH B 128 290 152 HOH HOH . G 3 HOH B 129 291 154 HOH HOH . G 3 HOH B 130 292 156 HOH HOH . G 3 HOH B 131 293 157 HOH HOH . G 3 HOH B 132 294 158 HOH HOH . G 3 HOH B 133 295 160 HOH HOH . G 3 HOH B 134 296 161 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 2 -8.252 -26.823 20.789 1 84 ? P PO4 163 A 1 HETATM 2 O O1 PO4 . . . D 2 -7.16 -26.001 20.127 1 83.76 ? O1 PO4 163 A 1 HETATM 3 O O2 PO4 . . . D 2 -9.274 -25.907 21.434 1 83.31 ? O2 PO4 163 A 1 HETATM 4 O O3 PO4 . . . D 2 -8.941 -27.686 19.761 1 84.19 ? O3 PO4 163 A 1 HETATM 5 O O4 PO4 . . . D 2 -7.65 -27.715 21.853 1 83.72 ? O4 PO4 163 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #