data_3LFB # _model_server_result.job_id KQrYoDJNM4mFPPnxGOnh5g _model_server_result.datetime_utc '2024-10-11 01:18:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lfb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":361}' # _entry.id 3LFB # _exptl.entry_id 3LFB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 355.457 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]-3-(1,3-thiazol-2-yl)urea _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LFB _cell.length_a 67.12 _cell.length_b 69.89 _cell.length_c 74.43 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LFB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H21 N5 O S' _chem_comp.formula_weight 355.457 _chem_comp.id Z87 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]-3-(1,3-thiazol-2-yl)urea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-(3-tert-butyl-1-p-tolyl-1H-pyrazol-5-yl)-3-(thiazol-2-yl)urea # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBL Z87 sing 424 n n CAA HAA Z87 sing 425 n n CAA HAAA Z87 sing 426 n n CAA HAAB Z87 sing 427 n n CAB CBL Z87 sing 428 n n CAB HAB Z87 sing 429 n n CAB HABA Z87 sing 430 n n CAB HABB Z87 sing 431 n n CBL CAC Z87 sing 432 n n CAC HAC Z87 sing 433 n n CAC HACA Z87 sing 434 n n CAC HACB Z87 sing 435 n n OAE CBC Z87 doub 436 n n CAN CAL Z87 doub 437 n y CAL CBE Z87 sing 438 n y CAL HAL Z87 sing 439 n n CAO CAM Z87 sing 440 n y CAM CBE Z87 doub 441 n y CAM HAM Z87 sing 442 n n CBG CAN Z87 sing 443 n y CAN HAN Z87 sing 444 n n CBG CAO Z87 doub 445 n y CAO HAO Z87 sing 446 n n CAP SBA Z87 sing 447 n y CAP CBF Z87 doub 448 n y CAP HAP Z87 sing 449 n n CAQ CBH Z87 sing 450 n y CAQ CBI Z87 doub 451 n y CAQ HAQ Z87 sing 452 n n CBE CAU Z87 sing 453 n n CAU HAU Z87 sing 454 n n CAU HAUA Z87 sing 455 n n CAU HAUB Z87 sing 456 n n CBF NAV Z87 sing 457 n y NAV CBJ Z87 doub 458 n y CBH NAW Z87 doub 459 n y NAW NBK Z87 sing 460 n y CBC NAX Z87 sing 461 n n NAX CBI Z87 sing 462 n n NAX HNAX Z87 sing 463 n n CBJ NAY Z87 sing 464 n n CBC NAY Z87 sing 465 n n NAY HNAY Z87 sing 466 n n SBA CBJ Z87 sing 467 n y CBF HBF Z87 sing 468 n n NBK CBG Z87 sing 469 n y CBL CBH Z87 sing 470 n n CBI NBK Z87 sing 471 n y # _atom_sites.entry_id 3LFB _atom_sites.fract_transf_matrix[1][1] 0.014899 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014308 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013435 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Z87 A 1 361 1 Z87 Z87 . C 3 BOG A 1 1000 1000 BOG BOG . D 4 HOH A 1 362 1 HOH HOH . D 4 HOH A 2 363 2 HOH HOH . D 4 HOH A 3 364 3 HOH HOH . D 4 HOH A 4 365 4 HOH HOH . D 4 HOH A 5 366 5 HOH HOH . D 4 HOH A 6 367 6 HOH HOH . D 4 HOH A 7 368 7 HOH HOH . D 4 HOH A 8 369 8 HOH HOH . D 4 HOH A 9 370 9 HOH HOH . D 4 HOH A 10 371 10 HOH HOH . D 4 HOH A 11 372 11 HOH HOH . D 4 HOH A 12 373 12 HOH HOH . D 4 HOH A 13 374 13 HOH HOH . D 4 HOH A 14 375 14 HOH HOH . D 4 HOH A 15 376 15 HOH HOH . D 4 HOH A 16 377 16 HOH HOH . D 4 HOH A 17 378 17 HOH HOH . D 4 HOH A 18 379 18 HOH HOH . D 4 HOH A 19 380 19 HOH HOH . D 4 HOH A 20 381 20 HOH HOH . D 4 HOH A 21 382 21 HOH HOH . D 4 HOH A 22 383 22 HOH HOH . D 4 HOH A 23 384 23 HOH HOH . D 4 HOH A 24 385 24 HOH HOH . D 4 HOH A 25 386 25 HOH HOH . D 4 HOH A 26 387 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Z87 . . . B 2 14.047 -7.905 -19.143 1 19.43 ? CAA Z87 361 A 1 HETATM 2 C CAB Z87 . . . B 2 15.291 -10.073 -19.018 1 19.83 ? CAB Z87 361 A 1 HETATM 3 C CAC Z87 . . . B 2 13.824 -9.334 -17.13 1 20.62 ? CAC Z87 361 A 1 HETATM 4 O OAE Z87 . . . B 2 18.299 -5.23 -19.201 1 26.54 ? OAE Z87 361 A 1 HETATM 5 C CAL Z87 . . . B 2 18.758 -6.153 -13.026 1 20.37 ? CAL Z87 361 A 1 HETATM 6 C CAM Z87 . . . B 2 18.699 -8.566 -12.852 1 19.48 ? CAM Z87 361 A 1 HETATM 7 C CAN Z87 . . . B 2 18.158 -6.227 -14.287 1 20.47 ? CAN Z87 361 A 1 HETATM 8 C CAO Z87 . . . B 2 18.113 -8.636 -14.114 1 19.82 ? CAO Z87 361 A 1 HETATM 9 C CAP Z87 . . . B 2 21.525 -2.399 -20.881 1 32.68 ? CAP Z87 361 A 1 HETATM 10 C CAQ Z87 . . . B 2 16.908 -7.445 -18.17 1 22.5 ? CAQ Z87 361 A 1 HETATM 11 C CAU Z87 . . . B 2 19.681 -7.246 -10.913 1 16.89 ? CAU Z87 361 A 1 HETATM 12 N NAV Z87 . . . B 2 22.178 -3.86 -19.256 1 31.42 ? NAV Z87 361 A 1 HETATM 13 N NAW Z87 . . . B 2 16.244 -8.251 -16.258 1 21.74 ? NAW Z87 361 A 1 HETATM 14 N NAX Z87 . . . B 2 18.826 -6.311 -17.299 1 25.55 ? NAX Z87 361 A 1 HETATM 15 N NAY Z87 . . . B 2 20.309 -4.873 -18.206 1 28.71 ? NAY Z87 361 A 1 HETATM 16 S SBA Z87 . . . B 2 20.073 -3.017 -20.24 1 33.4 ? SBA Z87 361 A 1 HETATM 17 C CBC Z87 . . . B 2 19.101 -5.456 -18.291 1 27.16 ? CBC Z87 361 A 1 HETATM 18 C CBE Z87 . . . B 2 19.03 -7.321 -12.305 1 20.05 ? CBE Z87 361 A 1 HETATM 19 C CBF Z87 . . . B 2 22.54 -2.981 -20.218 1 31.9 ? CBF Z87 361 A 1 HETATM 20 C CBG Z87 . . . B 2 17.838 -7.469 -14.837 1 21.24 ? CBG Z87 361 A 1 HETATM 21 C CBH Z87 . . . B 2 15.98 -8.183 -17.559 1 21.06 ? CBH Z87 361 A 1 HETATM 22 C CBI Z87 . . . B 2 17.718 -7.059 -17.182 1 23.56 ? CBI Z87 361 A 1 HETATM 23 C CBJ Z87 . . . B 2 20.852 -4.022 -19.102 1 31.32 ? CBJ Z87 361 A 1 HETATM 24 N NBK Z87 . . . B 2 17.27 -7.592 -16.045 1 22.78 ? NBK Z87 361 A 1 HETATM 25 C CBL Z87 . . . B 2 14.785 -8.871 -18.22 1 20.17 ? CBL Z87 361 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 25 #