data_3LHM # _model_server_result.job_id Xms0y2BViddqZCcxSGGjJA _model_server_result.datetime_utc '2024-11-09 02:33:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lhm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":131}' # _entry.id 3LHM # _exptl.entry_id 3LHM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LHM _cell.length_a 57.39 _cell.length_b 60.97 _cell.length_c 33.69 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LHM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 128 A CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 116 A CYS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf3 A SG CYS 65 A CYS 65 1_555 A SG CYS 81 A CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf4 A SG CYS 77 A CYS 77 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc1 A O ALA 83 A ALA 83 1_555 B CA CA . A CA 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc2 A OD1 ASP 86 A ASP 86 1_555 B CA CA . A CA 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc3 A O ASN 88 A ASN 88 1_555 B CA CA . A CA 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc4 A OD1 ASP 91 A ASP 91 1_555 B CA CA . A CA 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc5 A OD1 ASP 92 A ASP 92 1_555 B CA CA . A CA 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc6 B CA CA . A CA 131 1_555 C O HOH . A HOH 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc7 B CA CA . A CA 131 1_555 C O HOH . A HOH 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.903 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3LHM _atom_sites.fract_transf_matrix[1][1] 0.017425 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016402 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029682 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 131 131 CA CA . C 3 HOH A 1 132 1 HOH HOH . C 3 HOH A 2 133 2 HOH HOH . C 3 HOH A 3 134 3 HOH HOH . C 3 HOH A 4 135 4 HOH HOH . C 3 HOH A 5 136 5 HOH HOH . C 3 HOH A 6 137 6 HOH HOH . C 3 HOH A 7 138 7 HOH HOH . C 3 HOH A 8 139 8 HOH HOH . C 3 HOH A 9 140 9 HOH HOH . C 3 HOH A 10 141 10 HOH HOH . C 3 HOH A 11 142 11 HOH HOH . C 3 HOH A 12 143 12 HOH HOH . C 3 HOH A 13 144 13 HOH HOH . C 3 HOH A 14 145 14 HOH HOH . C 3 HOH A 15 146 15 HOH HOH . C 3 HOH A 16 147 16 HOH HOH . C 3 HOH A 17 148 17 HOH HOH . C 3 HOH A 18 149 18 HOH HOH . C 3 HOH A 19 150 19 HOH HOH . C 3 HOH A 20 151 20 HOH HOH . C 3 HOH A 21 152 21 HOH HOH . C 3 HOH A 22 153 22 HOH HOH . C 3 HOH A 23 154 23 HOH HOH . C 3 HOH A 24 155 24 HOH HOH . C 3 HOH A 25 156 25 HOH HOH . C 3 HOH A 26 157 26 HOH HOH . C 3 HOH A 27 158 27 HOH HOH . C 3 HOH A 28 159 28 HOH HOH . C 3 HOH A 29 160 29 HOH HOH . C 3 HOH A 30 161 30 HOH HOH . C 3 HOH A 31 162 31 HOH HOH . C 3 HOH A 32 163 32 HOH HOH . C 3 HOH A 33 164 33 HOH HOH . C 3 HOH A 34 165 34 HOH HOH . C 3 HOH A 35 166 35 HOH HOH . C 3 HOH A 36 167 36 HOH HOH . C 3 HOH A 37 168 37 HOH HOH . C 3 HOH A 38 169 38 HOH HOH . C 3 HOH A 39 170 39 HOH HOH . C 3 HOH A 40 171 40 HOH HOH . C 3 HOH A 41 172 41 HOH HOH . C 3 HOH A 42 173 42 HOH HOH . C 3 HOH A 43 174 43 HOH HOH . C 3 HOH A 44 175 44 HOH HOH . C 3 HOH A 45 176 45 HOH HOH . C 3 HOH A 46 177 46 HOH HOH . C 3 HOH A 47 178 47 HOH HOH . C 3 HOH A 48 179 48 HOH HOH . C 3 HOH A 49 180 49 HOH HOH . C 3 HOH A 50 181 50 HOH HOH . C 3 HOH A 51 182 51 HOH HOH . C 3 HOH A 52 183 52 HOH HOH . C 3 HOH A 53 184 53 HOH HOH . C 3 HOH A 54 185 54 HOH HOH . C 3 HOH A 55 186 55 HOH HOH . C 3 HOH A 56 187 56 HOH HOH . C 3 HOH A 57 188 57 HOH HOH . C 3 HOH A 58 189 58 HOH HOH . C 3 HOH A 59 190 59 HOH HOH . C 3 HOH A 60 191 60 HOH HOH . C 3 HOH A 61 192 61 HOH HOH . C 3 HOH A 62 193 62 HOH HOH . C 3 HOH A 63 194 63 HOH HOH . C 3 HOH A 64 195 64 HOH HOH . C 3 HOH A 65 196 65 HOH HOH . C 3 HOH A 66 197 66 HOH HOH . C 3 HOH A 67 198 67 HOH HOH . C 3 HOH A 68 199 68 HOH HOH . C 3 HOH A 69 200 69 HOH HOH . C 3 HOH A 70 201 70 HOH HOH . C 3 HOH A 71 202 71 HOH HOH . C 3 HOH A 72 203 72 HOH HOH . C 3 HOH A 73 204 73 HOH HOH . C 3 HOH A 74 205 74 HOH HOH . C 3 HOH A 75 206 75 HOH HOH . C 3 HOH A 76 207 76 HOH HOH . C 3 HOH A 77 208 77 HOH HOH . C 3 HOH A 78 209 78 HOH HOH . C 3 HOH A 79 210 79 HOH HOH . C 3 HOH A 80 211 80 HOH HOH . C 3 HOH A 81 212 81 HOH HOH . C 3 HOH A 82 213 82 HOH HOH . C 3 HOH A 83 214 83 HOH HOH . C 3 HOH A 84 215 84 HOH HOH . C 3 HOH A 85 216 85 HOH HOH . C 3 HOH A 86 217 86 HOH HOH . C 3 HOH A 87 218 87 HOH HOH . C 3 HOH A 88 219 88 HOH HOH . C 3 HOH A 89 220 89 HOH HOH . C 3 HOH A 90 221 90 HOH HOH . C 3 HOH A 91 222 91 HOH HOH . C 3 HOH A 92 223 92 HOH HOH . C 3 HOH A 93 224 93 HOH HOH . C 3 HOH A 94 225 94 HOH HOH . C 3 HOH A 95 226 95 HOH HOH . C 3 HOH A 96 227 96 HOH HOH . C 3 HOH A 97 228 97 HOH HOH . C 3 HOH A 98 229 98 HOH HOH . C 3 HOH A 99 230 99 HOH HOH . C 3 HOH A 100 231 100 HOH HOH . C 3 HOH A 101 232 101 HOH HOH . C 3 HOH A 102 233 102 HOH HOH . C 3 HOH A 103 234 103 HOH HOH . C 3 HOH A 104 235 104 HOH HOH . C 3 HOH A 105 236 105 HOH HOH . C 3 HOH A 106 237 106 HOH HOH . C 3 HOH A 107 238 107 HOH HOH . C 3 HOH A 108 239 108 HOH HOH . C 3 HOH A 109 240 109 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 3.824 _atom_site.Cartn_y 20.427 _atom_site.Cartn_z 32.126 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 10.89 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 131 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #