data_3LHO
#
_model_server_result.job_id            8Vy9Haoxhna-i7hVy6Ku-g 
_model_server_result.datetime_utc      '2024-11-14 22:55:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3lho 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":273}' 
#
_entry.id    3LHO 
#
_exptl.entry_id    3LHO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3LHO 
_cell.length_a            42.098 
_cell.length_b            75.035 
_cell.length_c            91.112 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3LHO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLY 1 A GLY 0 1_555 A N MSE 2 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale2 A C MSE 2 A MSE 1 1_555 A N HIS 3 A HIS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale3 A C LYS 19 A LYS 18 1_555 A N MSE 20 A MSE 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale4 A C MSE 20 A MSE 19 1_555 A N THR 21 A THR 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale5 A C THR 213 A THR 212 1_555 A N MSE 214 A MSE 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale6 A C MSE 214 A MSE 213 1_555 A N ALA 215 A ALA 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale7 A C PRO 241 A PRO 240 1_555 A N MSE 242 A MSE 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale8 A C MSE 242 A MSE 241 1_555 A N ALA 243 A ALA 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
metalc ? metalc1 A NE2 HIS 41 A HIS 40 1_555 B NI NI . A NI 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc2 A NE2 HIS 165 A HIS 164 1_555 B NI NI . A NI 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? 
metalc ? metalc3 A OE1 GLU 235 A GLU 234 1_555 B NI NI . A NI 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? 
metalc ? metalc4 B NI NI . A NI 267 1_555 M O HOH . A HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? 
metalc ? metalc5 B NI NI . A NI 267 1_555 M O HOH . A HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
metalc ? metalc6 B NI NI . A NI 267 1_555 M O HOH . A HOH 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     3LHO 
_atom_sites.fract_transf_matrix[1][1]    0.023754 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013327 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010976 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NI A 1 267 1 NI NI . 
C 3 SO4 A 1 268 2 SO4 SO4 . 
D 3 SO4 A 1 269 3 SO4 SO4 . 
E 3 SO4 A 1 270 4 SO4 SO4 . 
F 4 GOL A 1 271 5 GOL GOL . 
G 4 GOL A 1 272 6 GOL GOL . 
H 4 GOL A 1 273 7 GOL GOL . 
I 4 GOL A 1 274 8 GOL GOL . 
J 5 PEG A 1 275 9 PEG PEG . 
K 5 PEG A 1 276 10 PEG PEG . 
L 6 PG4 A 1 277 11 PG4 PG4 . 
M 7 HOH A 1 278 12 HOH HOH . 
M 7 HOH A 2 279 13 HOH HOH . 
M 7 HOH A 3 280 14 HOH HOH . 
M 7 HOH A 4 281 15 HOH HOH . 
M 7 HOH A 5 282 16 HOH HOH . 
M 7 HOH A 6 283 17 HOH HOH . 
M 7 HOH A 7 284 18 HOH HOH . 
M 7 HOH A 8 285 19 HOH HOH . 
M 7 HOH A 9 286 20 HOH HOH . 
M 7 HOH A 10 287 21 HOH HOH . 
M 7 HOH A 11 288 22 HOH HOH . 
M 7 HOH A 12 289 23 HOH HOH . 
M 7 HOH A 13 290 24 HOH HOH . 
M 7 HOH A 14 291 25 HOH HOH . 
M 7 HOH A 15 292 26 HOH HOH . 
M 7 HOH A 16 293 27 HOH HOH . 
M 7 HOH A 17 294 28 HOH HOH . 
M 7 HOH A 18 295 29 HOH HOH . 
M 7 HOH A 19 296 30 HOH HOH . 
M 7 HOH A 20 297 31 HOH HOH . 
M 7 HOH A 21 298 32 HOH HOH . 
M 7 HOH A 22 299 33 HOH HOH . 
M 7 HOH A 23 300 34 HOH HOH . 
M 7 HOH A 24 301 35 HOH HOH . 
M 7 HOH A 25 302 36 HOH HOH . 
M 7 HOH A 26 303 37 HOH HOH . 
M 7 HOH A 27 304 38 HOH HOH . 
M 7 HOH A 28 305 39 HOH HOH . 
M 7 HOH A 29 306 40 HOH HOH . 
M 7 HOH A 30 307 41 HOH HOH . 
M 7 HOH A 31 308 42 HOH HOH . 
M 7 HOH A 32 309 43 HOH HOH . 
M 7 HOH A 33 310 44 HOH HOH . 
M 7 HOH A 34 311 45 HOH HOH . 
M 7 HOH A 35 312 46 HOH HOH . 
M 7 HOH A 36 313 47 HOH HOH . 
M 7 HOH A 37 314 48 HOH HOH . 
M 7 HOH A 38 315 49 HOH HOH . 
M 7 HOH A 39 316 50 HOH HOH . 
M 7 HOH A 40 317 51 HOH HOH . 
M 7 HOH A 41 318 52 HOH HOH . 
M 7 HOH A 42 319 53 HOH HOH . 
M 7 HOH A 43 320 54 HOH HOH . 
M 7 HOH A 44 321 55 HOH HOH . 
M 7 HOH A 45 322 56 HOH HOH . 
M 7 HOH A 46 323 57 HOH HOH . 
M 7 HOH A 47 324 58 HOH HOH . 
M 7 HOH A 48 325 59 HOH HOH . 
M 7 HOH A 49 326 60 HOH HOH . 
M 7 HOH A 50 327 61 HOH HOH . 
M 7 HOH A 51 328 62 HOH HOH . 
M 7 HOH A 52 329 63 HOH HOH . 
M 7 HOH A 53 330 64 HOH HOH . 
M 7 HOH A 54 331 65 HOH HOH . 
M 7 HOH A 55 332 66 HOH HOH . 
M 7 HOH A 56 333 67 HOH HOH . 
M 7 HOH A 57 334 68 HOH HOH . 
M 7 HOH A 58 335 69 HOH HOH . 
M 7 HOH A 59 336 70 HOH HOH . 
M 7 HOH A 60 337 71 HOH HOH . 
M 7 HOH A 61 338 72 HOH HOH . 
M 7 HOH A 62 339 73 HOH HOH . 
M 7 HOH A 63 340 74 HOH HOH . 
M 7 HOH A 64 341 75 HOH HOH . 
M 7 HOH A 65 342 76 HOH HOH . 
M 7 HOH A 66 343 77 HOH HOH . 
M 7 HOH A 67 344 78 HOH HOH . 
M 7 HOH A 68 345 79 HOH HOH . 
M 7 HOH A 69 346 80 HOH HOH . 
M 7 HOH A 70 347 81 HOH HOH . 
M 7 HOH A 71 348 82 HOH HOH . 
M 7 HOH A 72 349 83 HOH HOH . 
M 7 HOH A 73 350 84 HOH HOH . 
M 7 HOH A 74 351 85 HOH HOH . 
M 7 HOH A 75 352 86 HOH HOH . 
M 7 HOH A 76 353 87 HOH HOH . 
M 7 HOH A 77 354 88 HOH HOH . 
M 7 HOH A 78 355 89 HOH HOH . 
M 7 HOH A 79 356 90 HOH HOH . 
M 7 HOH A 80 357 91 HOH HOH . 
M 7 HOH A 81 358 92 HOH HOH . 
M 7 HOH A 82 359 93 HOH HOH . 
M 7 HOH A 83 360 94 HOH HOH . 
M 7 HOH A 84 361 95 HOH HOH . 
M 7 HOH A 85 362 96 HOH HOH . 
M 7 HOH A 86 363 97 HOH HOH . 
M 7 HOH A 87 364 98 HOH HOH . 
M 7 HOH A 88 365 99 HOH HOH . 
M 7 HOH A 89 366 100 HOH HOH . 
M 7 HOH A 90 367 101 HOH HOH . 
M 7 HOH A 91 368 102 HOH HOH . 
M 7 HOH A 92 369 103 HOH HOH . 
M 7 HOH A 93 370 104 HOH HOH . 
M 7 HOH A 94 371 105 HOH HOH . 
M 7 HOH A 95 372 106 HOH HOH . 
M 7 HOH A 96 373 107 HOH HOH . 
M 7 HOH A 97 374 108 HOH HOH . 
M 7 HOH A 98 375 109 HOH HOH . 
M 7 HOH A 99 376 110 HOH HOH . 
M 7 HOH A 100 377 111 HOH HOH . 
M 7 HOH A 101 378 112 HOH HOH . 
M 7 HOH A 102 379 113 HOH HOH . 
M 7 HOH A 103 380 114 HOH HOH . 
M 7 HOH A 104 381 115 HOH HOH . 
M 7 HOH A 105 382 116 HOH HOH . 
M 7 HOH A 106 383 117 HOH HOH . 
M 7 HOH A 107 384 118 HOH HOH . 
M 7 HOH A 108 385 119 HOH HOH . 
M 7 HOH A 109 386 120 HOH HOH . 
M 7 HOH A 110 387 121 HOH HOH . 
M 7 HOH A 111 388 122 HOH HOH . 
M 7 HOH A 112 389 123 HOH HOH . 
M 7 HOH A 113 390 124 HOH HOH . 
M 7 HOH A 114 391 125 HOH HOH . 
M 7 HOH A 115 392 126 HOH HOH . 
M 7 HOH A 116 393 127 HOH HOH . 
M 7 HOH A 117 394 128 HOH HOH . 
M 7 HOH A 118 395 129 HOH HOH . 
M 7 HOH A 119 396 130 HOH HOH . 
M 7 HOH A 120 397 131 HOH HOH . 
M 7 HOH A 121 398 132 HOH HOH . 
M 7 HOH A 122 399 133 HOH HOH . 
M 7 HOH A 123 400 134 HOH HOH . 
M 7 HOH A 124 401 135 HOH HOH . 
M 7 HOH A 125 402 136 HOH HOH . 
M 7 HOH A 126 403 137 HOH HOH . 
M 7 HOH A 127 404 138 HOH HOH . 
M 7 HOH A 128 405 139 HOH HOH . 
M 7 HOH A 129 406 140 HOH HOH . 
M 7 HOH A 130 407 141 HOH HOH . 
M 7 HOH A 131 408 142 HOH HOH . 
M 7 HOH A 132 409 143 HOH HOH . 
M 7 HOH A 133 410 144 HOH HOH . 
M 7 HOH A 134 411 145 HOH HOH . 
M 7 HOH A 135 412 146 HOH HOH . 
M 7 HOH A 136 413 147 HOH HOH . 
M 7 HOH A 137 414 148 HOH HOH . 
M 7 HOH A 138 415 149 HOH HOH . 
M 7 HOH A 139 416 150 HOH HOH . 
M 7 HOH A 140 417 151 HOH HOH . 
M 7 HOH A 141 418 152 HOH HOH . 
M 7 HOH A 142 419 153 HOH HOH . 
M 7 HOH A 143 420 154 HOH HOH . 
M 7 HOH A 144 421 155 HOH HOH . 
M 7 HOH A 145 422 156 HOH HOH . 
M 7 HOH A 146 423 157 HOH HOH . 
M 7 HOH A 147 424 158 HOH HOH . 
M 7 HOH A 148 425 159 HOH HOH . 
M 7 HOH A 149 426 160 HOH HOH . 
M 7 HOH A 150 427 161 HOH HOH . 
M 7 HOH A 151 428 162 HOH HOH . 
M 7 HOH A 152 429 163 HOH HOH . 
M 7 HOH A 153 430 164 HOH HOH . 
M 7 HOH A 154 431 165 HOH HOH . 
M 7 HOH A 155 432 166 HOH HOH . 
M 7 HOH A 156 433 167 HOH HOH . 
M 7 HOH A 157 434 168 HOH HOH . 
M 7 HOH A 158 435 169 HOH HOH . 
M 7 HOH A 159 436 170 HOH HOH . 
M 7 HOH A 160 437 171 HOH HOH . 
M 7 HOH A 161 438 172 HOH HOH . 
M 7 HOH A 162 439 173 HOH HOH . 
M 7 HOH A 163 440 174 HOH HOH . 
M 7 HOH A 164 441 175 HOH HOH . 
M 7 HOH A 165 442 176 HOH HOH . 
M 7 HOH A 166 443 177 HOH HOH . 
M 7 HOH A 167 444 178 HOH HOH . 
M 7 HOH A 168 445 179 HOH HOH . 
M 7 HOH A 169 446 180 HOH HOH . 
M 7 HOH A 170 447 181 HOH HOH . 
M 7 HOH A 171 448 182 HOH HOH . 
M 7 HOH A 172 449 183 HOH HOH . 
M 7 HOH A 173 450 184 HOH HOH . 
M 7 HOH A 174 451 185 HOH HOH . 
M 7 HOH A 175 452 186 HOH HOH . 
M 7 HOH A 176 453 187 HOH HOH . 
M 7 HOH A 177 454 188 HOH HOH . 
M 7 HOH A 178 455 189 HOH HOH . 
M 7 HOH A 179 456 190 HOH HOH . 
M 7 HOH A 180 457 191 HOH HOH . 
M 7 HOH A 181 458 192 HOH HOH . 
M 7 HOH A 182 459 193 HOH HOH . 
M 7 HOH A 183 460 194 HOH HOH . 
M 7 HOH A 184 461 195 HOH HOH . 
M 7 HOH A 185 462 196 HOH HOH . 
M 7 HOH A 186 463 197 HOH HOH . 
M 7 HOH A 187 464 198 HOH HOH . 
M 7 HOH A 188 465 199 HOH HOH . 
M 7 HOH A 189 466 200 HOH HOH . 
M 7 HOH A 190 467 201 HOH HOH . 
M 7 HOH A 191 468 202 HOH HOH . 
M 7 HOH A 192 469 203 HOH HOH . 
M 7 HOH A 193 470 204 HOH HOH . 
M 7 HOH A 194 471 205 HOH HOH . 
M 7 HOH A 195 472 206 HOH HOH . 
M 7 HOH A 196 473 207 HOH HOH . 
M 7 HOH A 197 474 208 HOH HOH . 
M 7 HOH A 198 475 209 HOH HOH . 
M 7 HOH A 199 476 210 HOH HOH . 
M 7 HOH A 200 477 211 HOH HOH . 
M 7 HOH A 201 478 212 HOH HOH . 
M 7 HOH A 202 479 213 HOH HOH . 
M 7 HOH A 203 480 214 HOH HOH . 
M 7 HOH A 204 481 215 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 4 11.057 12.121 22.826 1 64.37 ? C1 GOL 273 A 1 
HETATM 2 O O1 GOL . . . H 4 10.162 11.558 23.755 1 66.74 ? O1 GOL 273 A 1 
HETATM 3 C C2 GOL . . . H 4 11.667 11.019 21.963 1 66.73 ? C2 GOL 273 A 1 
HETATM 4 O O2 GOL . . . H 4 11.783 11.492 20.643 1 64.23 ? O2 GOL 273 A 1 
HETATM 5 C C3 GOL . . . H 4 13.043 10.556 22.446 1 65.43 ? C3 GOL 273 A 1 
HETATM 6 O O3 GOL . . . H 4 13.144 9.146 22.356 1 70.22 ? O3 GOL 273 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           6 
#