data_3LHP # _model_server_result.job_id GKq2GQG4PLqYN7EiAABwRg _model_server_result.datetime_utc '2024-11-08 03:48:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lhp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":113}' # _entry.id 3LHP # _exptl.entry_id 3LHP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LHP _cell.length_a 52.977 _cell.length_b 88.623 _cell.length_c 149.997 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LHP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,H,J,L 1 1 B,D,F,G,I,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 H CYS 22 1_555 A SG CYS 98 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 B SG CYS 24 I CYS 22 1_555 B SG CYS 98 I CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf3 C SG CYS 25 L CYS 23 1_555 C SG CYS 91 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 D SG CYS 25 M CYS 23 1_555 D SG CYS 91 M CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3LHP _atom_sites.fract_transf_matrix[1][1] 0.018876 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011284 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006667 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 EDO M 1 113 100 EDO EDO . H 5 HOH H 1 136 9 HOH HOH . H 5 HOH H 2 137 15 HOH HOH . H 5 HOH H 3 138 18 HOH HOH . H 5 HOH H 4 139 22 HOH HOH . H 5 HOH H 5 140 26 HOH HOH . H 5 HOH H 6 141 27 HOH HOH . H 5 HOH H 7 142 30 HOH HOH . H 5 HOH H 8 143 39 HOH HOH . H 5 HOH H 9 144 40 HOH HOH . H 5 HOH H 10 145 42 HOH HOH . H 5 HOH H 11 146 44 HOH HOH . H 5 HOH H 12 147 47 HOH HOH . H 5 HOH H 13 148 48 HOH HOH . H 5 HOH H 14 149 49 HOH HOH . H 5 HOH H 15 150 50 HOH HOH . H 5 HOH H 16 151 51 HOH HOH . H 5 HOH H 17 152 80 HOH HOH . H 5 HOH H 18 153 82 HOH HOH . I 5 HOH I 1 136 23 HOH HOH . I 5 HOH I 2 137 31 HOH HOH . I 5 HOH I 3 138 38 HOH HOH . I 5 HOH I 4 139 46 HOH HOH . I 5 HOH I 5 140 53 HOH HOH . I 5 HOH I 6 141 81 HOH HOH . J 5 HOH L 1 113 1 HOH HOH . J 5 HOH L 2 114 5 HOH HOH . J 5 HOH L 3 115 10 HOH HOH . J 5 HOH L 4 116 12 HOH HOH . J 5 HOH L 5 117 19 HOH HOH . J 5 HOH L 6 118 21 HOH HOH . J 5 HOH L 7 119 28 HOH HOH . J 5 HOH L 8 120 32 HOH HOH . J 5 HOH L 9 121 33 HOH HOH . J 5 HOH L 10 122 34 HOH HOH . J 5 HOH L 11 123 43 HOH HOH . J 5 HOH L 12 124 54 HOH HOH . J 5 HOH L 13 125 55 HOH HOH . J 5 HOH L 14 126 56 HOH HOH . J 5 HOH L 15 127 57 HOH HOH . J 5 HOH L 16 128 68 HOH HOH . J 5 HOH L 17 129 72 HOH HOH . J 5 HOH L 18 130 73 HOH HOH . J 5 HOH L 19 131 78 HOH HOH . J 5 HOH L 20 132 79 HOH HOH . K 5 HOH M 1 114 3 HOH HOH . K 5 HOH M 2 115 4 HOH HOH . K 5 HOH M 3 116 6 HOH HOH . K 5 HOH M 4 117 7 HOH HOH . K 5 HOH M 5 118 8 HOH HOH . K 5 HOH M 6 119 11 HOH HOH . K 5 HOH M 7 120 13 HOH HOH . K 5 HOH M 8 121 17 HOH HOH . K 5 HOH M 9 122 29 HOH HOH . K 5 HOH M 10 123 35 HOH HOH . K 5 HOH M 11 124 37 HOH HOH . K 5 HOH M 12 125 41 HOH HOH . K 5 HOH M 13 126 45 HOH HOH . K 5 HOH M 14 127 52 HOH HOH . K 5 HOH M 15 128 58 HOH HOH . K 5 HOH M 16 129 59 HOH HOH . K 5 HOH M 17 130 60 HOH HOH . K 5 HOH M 18 131 61 HOH HOH . K 5 HOH M 19 132 67 HOH HOH . K 5 HOH M 20 133 69 HOH HOH . K 5 HOH M 21 134 70 HOH HOH . K 5 HOH M 22 135 74 HOH HOH . K 5 HOH M 23 136 75 HOH HOH . L 5 HOH S 1 124 2 HOH HOH . L 5 HOH S 2 125 14 HOH HOH . L 5 HOH S 3 126 16 HOH HOH . L 5 HOH S 4 127 20 HOH HOH . L 5 HOH S 5 128 24 HOH HOH . L 5 HOH S 6 129 25 HOH HOH . L 5 HOH S 7 130 36 HOH HOH . L 5 HOH S 8 131 62 HOH HOH . L 5 HOH S 9 132 63 HOH HOH . L 5 HOH S 10 133 64 HOH HOH . L 5 HOH S 11 134 76 HOH HOH . L 5 HOH S 12 135 77 HOH HOH . M 5 HOH T 1 124 65 HOH HOH . M 5 HOH T 2 125 66 HOH HOH . M 5 HOH T 3 126 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . G 4 12.924 -25.329 28.83 1 53.97 ? C1 EDO 113 M 1 HETATM 2 O O1 EDO . . . G 4 12.657 -25.685 27.468 1 54.11 ? O1 EDO 113 M 1 HETATM 3 C C2 EDO . . . G 4 14.025 -24.28 28.868 1 52.95 ? C2 EDO 113 M 1 HETATM 4 O O2 EDO . . . G 4 13.505 -23.023 28.445 1 51.9 ? O2 EDO 113 M 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #