data_3LHP
#
_model_server_result.job_id            qxzh-v54Y6eOi5KP1IwiHA 
_model_server_result.datetime_utc      '2024-11-22 17:15:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3lhp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":113}' 
#
_entry.id    3LHP 
#
_exptl.entry_id    3LHP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3LHP 
_cell.length_a            52.977 
_cell.length_b            88.623 
_cell.length_c            149.997 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3LHP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,H,J,L 1 1 
B,D,F,G,I,K,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 24 H CYS 22 1_555 A SG CYS 98 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf2 B SG CYS 24 I CYS 22 1_555 B SG CYS 98 I CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
disulf ? disulf3 C SG CYS 25 L CYS 23 1_555 C SG CYS 91 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf4 D SG CYS 25 M CYS 23 1_555 D SG CYS 91 M CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3LHP 
_atom_sites.fract_transf_matrix[1][1]    0.018876 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011284 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006667 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 EDO M 1 113 100 EDO EDO . 
H 5 HOH H 1 136 9 HOH HOH . 
H 5 HOH H 2 137 15 HOH HOH . 
H 5 HOH H 3 138 18 HOH HOH . 
H 5 HOH H 4 139 22 HOH HOH . 
H 5 HOH H 5 140 26 HOH HOH . 
H 5 HOH H 6 141 27 HOH HOH . 
H 5 HOH H 7 142 30 HOH HOH . 
H 5 HOH H 8 143 39 HOH HOH . 
H 5 HOH H 9 144 40 HOH HOH . 
H 5 HOH H 10 145 42 HOH HOH . 
H 5 HOH H 11 146 44 HOH HOH . 
H 5 HOH H 12 147 47 HOH HOH . 
H 5 HOH H 13 148 48 HOH HOH . 
H 5 HOH H 14 149 49 HOH HOH . 
H 5 HOH H 15 150 50 HOH HOH . 
H 5 HOH H 16 151 51 HOH HOH . 
H 5 HOH H 17 152 80 HOH HOH . 
H 5 HOH H 18 153 82 HOH HOH . 
I 5 HOH I 1 136 23 HOH HOH . 
I 5 HOH I 2 137 31 HOH HOH . 
I 5 HOH I 3 138 38 HOH HOH . 
I 5 HOH I 4 139 46 HOH HOH . 
I 5 HOH I 5 140 53 HOH HOH . 
I 5 HOH I 6 141 81 HOH HOH . 
J 5 HOH L 1 113 1 HOH HOH . 
J 5 HOH L 2 114 5 HOH HOH . 
J 5 HOH L 3 115 10 HOH HOH . 
J 5 HOH L 4 116 12 HOH HOH . 
J 5 HOH L 5 117 19 HOH HOH . 
J 5 HOH L 6 118 21 HOH HOH . 
J 5 HOH L 7 119 28 HOH HOH . 
J 5 HOH L 8 120 32 HOH HOH . 
J 5 HOH L 9 121 33 HOH HOH . 
J 5 HOH L 10 122 34 HOH HOH . 
J 5 HOH L 11 123 43 HOH HOH . 
J 5 HOH L 12 124 54 HOH HOH . 
J 5 HOH L 13 125 55 HOH HOH . 
J 5 HOH L 14 126 56 HOH HOH . 
J 5 HOH L 15 127 57 HOH HOH . 
J 5 HOH L 16 128 68 HOH HOH . 
J 5 HOH L 17 129 72 HOH HOH . 
J 5 HOH L 18 130 73 HOH HOH . 
J 5 HOH L 19 131 78 HOH HOH . 
J 5 HOH L 20 132 79 HOH HOH . 
K 5 HOH M 1 114 3 HOH HOH . 
K 5 HOH M 2 115 4 HOH HOH . 
K 5 HOH M 3 116 6 HOH HOH . 
K 5 HOH M 4 117 7 HOH HOH . 
K 5 HOH M 5 118 8 HOH HOH . 
K 5 HOH M 6 119 11 HOH HOH . 
K 5 HOH M 7 120 13 HOH HOH . 
K 5 HOH M 8 121 17 HOH HOH . 
K 5 HOH M 9 122 29 HOH HOH . 
K 5 HOH M 10 123 35 HOH HOH . 
K 5 HOH M 11 124 37 HOH HOH . 
K 5 HOH M 12 125 41 HOH HOH . 
K 5 HOH M 13 126 45 HOH HOH . 
K 5 HOH M 14 127 52 HOH HOH . 
K 5 HOH M 15 128 58 HOH HOH . 
K 5 HOH M 16 129 59 HOH HOH . 
K 5 HOH M 17 130 60 HOH HOH . 
K 5 HOH M 18 131 61 HOH HOH . 
K 5 HOH M 19 132 67 HOH HOH . 
K 5 HOH M 20 133 69 HOH HOH . 
K 5 HOH M 21 134 70 HOH HOH . 
K 5 HOH M 22 135 74 HOH HOH . 
K 5 HOH M 23 136 75 HOH HOH . 
L 5 HOH S 1 124 2 HOH HOH . 
L 5 HOH S 2 125 14 HOH HOH . 
L 5 HOH S 3 126 16 HOH HOH . 
L 5 HOH S 4 127 20 HOH HOH . 
L 5 HOH S 5 128 24 HOH HOH . 
L 5 HOH S 6 129 25 HOH HOH . 
L 5 HOH S 7 130 36 HOH HOH . 
L 5 HOH S 8 131 62 HOH HOH . 
L 5 HOH S 9 132 63 HOH HOH . 
L 5 HOH S 10 133 64 HOH HOH . 
L 5 HOH S 11 134 76 HOH HOH . 
L 5 HOH S 12 135 77 HOH HOH . 
M 5 HOH T 1 124 65 HOH HOH . 
M 5 HOH T 2 125 66 HOH HOH . 
M 5 HOH T 3 126 71 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . G 4 12.924 -25.329 28.83 1 53.97 ? C1 EDO 113 M 1 
HETATM 2 O O1 EDO . . . G 4 12.657 -25.685 27.468 1 54.11 ? O1 EDO 113 M 1 
HETATM 3 C C2 EDO . . . G 4 14.025 -24.28 28.868 1 52.95 ? C2 EDO 113 M 1 
HETATM 4 O O2 EDO . . . G 4 13.505 -23.023 28.445 1 51.9 ? O2 EDO 113 M 1 
#
_model_server_stats.io_time_ms              119 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#