data_3LI2 # _model_server_result.job_id scsQk_x5GEaKYMRHbZTeMw _model_server_result.datetime_utc '2025-02-07 09:11:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3li2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":3}' # _entry.id 3LI2 # _exptl.entry_id 3LI2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.14 _cell.angle_gamma 90 _cell.entry_id 3LI2 _cell.length_a 52.28 _cell.length_b 148.6 _cell.length_c 52.27 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LI2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,L 1 1 B,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 E ZN ZN . A ZN 1 1_555 A NE2 HIS 235 A HIS 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.788 ? metalc ? metalc2 E ZN ZN . A ZN 1 1_555 L O HOH . A HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc3 F ZN ZN . A ZN 2 1_555 A ND1 HIS 235 A HIS 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc4 F ZN ZN . A ZN 2 1_555 A OD1 ASP 239 A ASP 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.725 ? metalc ? metalc5 G ZN ZN . A ZN 3 1_555 A OD1 ASP 217 A ASP 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.842 ? metalc ? metalc6 G ZN ZN . A ZN 3 1_555 A OD2 ASP 217 A ASP 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc7 G ZN ZN . A ZN 3 1_555 A ND1 HIS 220 A HIS 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc8 H ZN ZN . A ZN 4 1_555 A OD2 ASP 223 A ASP 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc9 H ZN ZN . A ZN 4 1_555 A OD1 ASP 223 A ASP 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc10 C FE FE . A FE 500 1_555 D O29 SF8 . A SF8 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.913 ? metalc ? metalc11 C FE FE . A FE 500 1_555 D O22 SF8 . A SF8 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc12 C FE FE . A FE 500 1_555 D O32 SF8 . A SF8 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc13 C FE FE . A FE 500 1_555 D O30 SF8 . A SF8 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc14 C FE FE . A FE 500 1_555 D O19 SF8 . A SF8 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc15 C FE FE . A FE 500 1_555 D O18 SF8 . A SF8 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc16 J FE FE . B FE 500 1_555 K O22 SF8 . B SF8 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? metalc ? metalc17 J FE FE . B FE 500 1_555 K O30 SF8 . B SF8 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc18 J FE FE . B FE 500 1_555 K O29 SF8 . B SF8 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc19 J FE FE . B FE 500 1_555 K O19 SF8 . B SF8 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc20 J FE FE . B FE 500 1_555 K O18 SF8 . B SF8 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc21 J FE FE . B FE 500 1_555 K O32 SF8 . B SF8 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3LI2 _atom_sites.fract_transf_matrix[1][1] 0.019128 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009805 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006729 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021498 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FE A 1 500 500 FE FE . D 3 SF8 A 1 501 501 SF8 SF8 . E 4 ZN A 1 1 1 ZN ZN . F 4 ZN A 1 2 2 ZN ZN . G 4 ZN A 1 3 3 ZN ZN . H 4 ZN A 1 4 4 ZN ZN . I 5 ACT A 1 14 14 ACT ACT . J 2 FE B 1 500 500 FE FE . K 3 SF8 B 1 501 501 SF8 SF8 . L 6 HOH A 1 8 8 HOH HOH . L 6 HOH A 2 11 11 HOH HOH . L 6 HOH A 3 13 13 HOH HOH . L 6 HOH A 4 15 15 HOH HOH . L 6 HOH A 5 16 16 HOH HOH . L 6 HOH A 6 17 17 HOH HOH . L 6 HOH A 7 18 18 HOH HOH . L 6 HOH A 8 20 20 HOH HOH . L 6 HOH A 9 21 21 HOH HOH . L 6 HOH A 10 25 25 HOH HOH . L 6 HOH A 11 26 26 HOH HOH . L 6 HOH A 12 28 28 HOH HOH . L 6 HOH A 13 30 30 HOH HOH . L 6 HOH A 14 328 2 HOH HOH . L 6 HOH A 15 329 3 HOH HOH . L 6 HOH A 16 330 4 HOH HOH . L 6 HOH A 17 331 14 HOH HOH . L 6 HOH A 18 332 32 HOH HOH . L 6 HOH A 19 333 33 HOH HOH . L 6 HOH A 20 334 36 HOH HOH . L 6 HOH A 21 335 37 HOH HOH . L 6 HOH A 22 336 39 HOH HOH . L 6 HOH A 23 337 40 HOH HOH . L 6 HOH A 24 338 42 HOH HOH . L 6 HOH A 25 339 43 HOH HOH . L 6 HOH A 26 340 44 HOH HOH . L 6 HOH A 27 341 47 HOH HOH . L 6 HOH A 28 342 48 HOH HOH . L 6 HOH A 29 343 51 HOH HOH . L 6 HOH A 30 344 54 HOH HOH . L 6 HOH A 31 345 56 HOH HOH . L 6 HOH A 32 346 60 HOH HOH . L 6 HOH A 33 347 62 HOH HOH . L 6 HOH A 34 348 69 HOH HOH . L 6 HOH A 35 349 70 HOH HOH . L 6 HOH A 36 350 73 HOH HOH . L 6 HOH A 37 351 74 HOH HOH . L 6 HOH A 38 352 78 HOH HOH . L 6 HOH A 39 353 80 HOH HOH . L 6 HOH A 40 354 85 HOH HOH . L 6 HOH A 41 355 86 HOH HOH . L 6 HOH A 42 356 87 HOH HOH . L 6 HOH A 43 357 89 HOH HOH . L 6 HOH A 44 358 93 HOH HOH . L 6 HOH A 45 359 96 HOH HOH . L 6 HOH A 46 360 97 HOH HOH . L 6 HOH A 47 361 98 HOH HOH . L 6 HOH A 48 362 100 HOH HOH . L 6 HOH A 49 363 104 HOH HOH . L 6 HOH A 50 364 105 HOH HOH . L 6 HOH A 51 365 108 HOH HOH . L 6 HOH A 52 366 109 HOH HOH . L 6 HOH A 53 367 112 HOH HOH . L 6 HOH A 54 368 113 HOH HOH . L 6 HOH A 55 369 115 HOH HOH . L 6 HOH A 56 370 119 HOH HOH . L 6 HOH A 57 371 120 HOH HOH . L 6 HOH A 58 372 123 HOH HOH . L 6 HOH A 59 373 124 HOH HOH . L 6 HOH A 60 374 125 HOH HOH . L 6 HOH A 61 375 127 HOH HOH . L 6 HOH A 62 376 130 HOH HOH . L 6 HOH A 63 377 133 HOH HOH . L 6 HOH A 64 378 134 HOH HOH . L 6 HOH A 65 379 136 HOH HOH . L 6 HOH A 66 380 142 HOH HOH . L 6 HOH A 67 381 149 HOH HOH . L 6 HOH A 68 382 150 HOH HOH . L 6 HOH A 69 383 152 HOH HOH . L 6 HOH A 70 384 158 HOH HOH . L 6 HOH A 71 385 159 HOH HOH . L 6 HOH A 72 386 160 HOH HOH . L 6 HOH A 73 387 163 HOH HOH . L 6 HOH A 74 388 164 HOH HOH . L 6 HOH A 75 389 165 HOH HOH . L 6 HOH A 76 390 167 HOH HOH . L 6 HOH A 77 391 168 HOH HOH . L 6 HOH A 78 392 171 HOH HOH . L 6 HOH A 79 393 172 HOH HOH . L 6 HOH A 80 394 174 HOH HOH . L 6 HOH A 81 395 176 HOH HOH . L 6 HOH A 82 396 179 HOH HOH . L 6 HOH A 83 397 184 HOH HOH . L 6 HOH A 84 398 186 HOH HOH . L 6 HOH A 85 399 189 HOH HOH . L 6 HOH A 86 400 191 HOH HOH . L 6 HOH A 87 401 192 HOH HOH . L 6 HOH A 88 402 193 HOH HOH . L 6 HOH A 89 403 198 HOH HOH . L 6 HOH A 90 404 199 HOH HOH . L 6 HOH A 91 405 200 HOH HOH . L 6 HOH A 92 406 201 HOH HOH . L 6 HOH A 93 407 202 HOH HOH . L 6 HOH A 94 408 203 HOH HOH . L 6 HOH A 95 409 204 HOH HOH . L 6 HOH A 96 410 206 HOH HOH . L 6 HOH A 97 411 207 HOH HOH . L 6 HOH A 98 412 208 HOH HOH . L 6 HOH A 99 413 209 HOH HOH . L 6 HOH A 100 414 213 HOH HOH . L 6 HOH A 101 415 215 HOH HOH . L 6 HOH A 102 416 218 HOH HOH . M 6 HOH B 1 1 1 HOH HOH . M 6 HOH B 2 5 5 HOH HOH . M 6 HOH B 3 6 6 HOH HOH . M 6 HOH B 4 7 7 HOH HOH . M 6 HOH B 5 9 9 HOH HOH . M 6 HOH B 6 10 10 HOH HOH . M 6 HOH B 7 12 12 HOH HOH . M 6 HOH B 8 19 19 HOH HOH . M 6 HOH B 9 22 22 HOH HOH . M 6 HOH B 10 23 23 HOH HOH . M 6 HOH B 11 24 24 HOH HOH . M 6 HOH B 12 27 27 HOH HOH . M 6 HOH B 13 29 29 HOH HOH . M 6 HOH B 14 31 31 HOH HOH . M 6 HOH B 15 328 34 HOH HOH . M 6 HOH B 16 329 35 HOH HOH . M 6 HOH B 17 330 38 HOH HOH . M 6 HOH B 18 331 41 HOH HOH . M 6 HOH B 19 332 45 HOH HOH . M 6 HOH B 20 333 46 HOH HOH . M 6 HOH B 21 334 49 HOH HOH . M 6 HOH B 22 335 50 HOH HOH . M 6 HOH B 23 336 52 HOH HOH . M 6 HOH B 24 337 53 HOH HOH . M 6 HOH B 25 338 55 HOH HOH . M 6 HOH B 26 339 57 HOH HOH . M 6 HOH B 27 340 58 HOH HOH . M 6 HOH B 28 341 59 HOH HOH . M 6 HOH B 29 342 61 HOH HOH . M 6 HOH B 30 343 63 HOH HOH . M 6 HOH B 31 344 64 HOH HOH . M 6 HOH B 32 345 65 HOH HOH . M 6 HOH B 33 346 66 HOH HOH . M 6 HOH B 34 347 67 HOH HOH . M 6 HOH B 35 348 68 HOH HOH . M 6 HOH B 36 349 71 HOH HOH . M 6 HOH B 37 350 72 HOH HOH . M 6 HOH B 38 351 75 HOH HOH . M 6 HOH B 39 352 76 HOH HOH . M 6 HOH B 40 353 77 HOH HOH . M 6 HOH B 41 354 79 HOH HOH . M 6 HOH B 42 355 81 HOH HOH . M 6 HOH B 43 356 82 HOH HOH . M 6 HOH B 44 357 83 HOH HOH . M 6 HOH B 45 358 84 HOH HOH . M 6 HOH B 46 359 88 HOH HOH . M 6 HOH B 47 360 90 HOH HOH . M 6 HOH B 48 361 91 HOH HOH . M 6 HOH B 49 362 92 HOH HOH . M 6 HOH B 50 363 94 HOH HOH . M 6 HOH B 51 364 95 HOH HOH . M 6 HOH B 52 365 99 HOH HOH . M 6 HOH B 53 366 101 HOH HOH . M 6 HOH B 54 367 102 HOH HOH . M 6 HOH B 55 368 103 HOH HOH . M 6 HOH B 56 369 106 HOH HOH . M 6 HOH B 57 370 107 HOH HOH . M 6 HOH B 58 371 110 HOH HOH . M 6 HOH B 59 372 111 HOH HOH . M 6 HOH B 60 373 114 HOH HOH . M 6 HOH B 61 374 116 HOH HOH . M 6 HOH B 62 375 117 HOH HOH . M 6 HOH B 63 376 118 HOH HOH . M 6 HOH B 64 377 121 HOH HOH . M 6 HOH B 65 378 122 HOH HOH . M 6 HOH B 66 379 126 HOH HOH . M 6 HOH B 67 380 128 HOH HOH . M 6 HOH B 68 381 129 HOH HOH . M 6 HOH B 69 382 131 HOH HOH . M 6 HOH B 70 383 132 HOH HOH . M 6 HOH B 71 384 135 HOH HOH . M 6 HOH B 72 385 137 HOH HOH . M 6 HOH B 73 386 138 HOH HOH . M 6 HOH B 74 387 139 HOH HOH . M 6 HOH B 75 388 140 HOH HOH . M 6 HOH B 76 389 141 HOH HOH . M 6 HOH B 77 390 143 HOH HOH . M 6 HOH B 78 391 144 HOH HOH . M 6 HOH B 79 392 145 HOH HOH . M 6 HOH B 80 393 146 HOH HOH . M 6 HOH B 81 394 147 HOH HOH . M 6 HOH B 82 395 148 HOH HOH . M 6 HOH B 83 396 151 HOH HOH . M 6 HOH B 84 397 153 HOH HOH . M 6 HOH B 85 398 154 HOH HOH . M 6 HOH B 86 399 155 HOH HOH . M 6 HOH B 87 400 156 HOH HOH . M 6 HOH B 88 401 157 HOH HOH . M 6 HOH B 89 402 161 HOH HOH . M 6 HOH B 90 403 162 HOH HOH . M 6 HOH B 91 404 166 HOH HOH . M 6 HOH B 92 405 169 HOH HOH . M 6 HOH B 93 406 170 HOH HOH . M 6 HOH B 94 407 173 HOH HOH . M 6 HOH B 95 408 175 HOH HOH . M 6 HOH B 96 409 177 HOH HOH . M 6 HOH B 97 410 178 HOH HOH . M 6 HOH B 98 411 180 HOH HOH . M 6 HOH B 99 412 181 HOH HOH . M 6 HOH B 100 413 182 HOH HOH . M 6 HOH B 101 414 183 HOH HOH . M 6 HOH B 102 415 185 HOH HOH . M 6 HOH B 103 416 187 HOH HOH . M 6 HOH B 104 417 188 HOH HOH . M 6 HOH B 105 418 190 HOH HOH . M 6 HOH B 106 419 194 HOH HOH . M 6 HOH B 107 420 195 HOH HOH . M 6 HOH B 108 421 196 HOH HOH . M 6 HOH B 109 422 197 HOH HOH . M 6 HOH B 110 423 205 HOH HOH . M 6 HOH B 111 424 210 HOH HOH . M 6 HOH B 112 425 211 HOH HOH . M 6 HOH B 113 426 212 HOH HOH . M 6 HOH B 114 427 214 HOH HOH . M 6 HOH B 115 428 216 HOH HOH . M 6 HOH B 116 429 217 HOH HOH . M 6 HOH B 117 430 219 HOH HOH . M 6 HOH B 118 431 220 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 4 _atom_site.Cartn_x 10.488 _atom_site.Cartn_y 6.065 _atom_site.Cartn_z 19.051 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.98 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 3 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #