data_3LIX # _model_server_result.job_id 46Hb7SFoX65goIGsbj0x3w _model_server_result.datetime_utc '2024-11-17 00:31:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lix # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":117}' # _entry.id 3LIX # _exptl.entry_id 3LIX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3LIX _cell.length_a 77.376 _cell.length_b 77.376 _cell.length_c 159.327 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LIX _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dodecameric 12 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 77.376 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 38.688 67.009582 0 4 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/2 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 38.688 67.009582 79.6635 5 'crystal symmetry operation' 11_655 -x+y+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 77.376 0 79.6635 6 'crystal symmetry operation' 12_555 x,x-y,-z+1/2 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 79.6635 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 65 A ASP 65 1_555 C ZN ZN . A ZN 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc2 A OD1 ASP 65 A ASP 65 1_555 C ZN ZN . A ZN 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.645 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3LIX _atom_sites.fract_transf_matrix[1][1] 0.012924 _atom_sites.fract_transf_matrix[1][2] 0.007462 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014923 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006276 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 117 1 ZN ZN . D 3 E17 B 1 117 1 E17 DRG . E 4 HOH A 1 118 1 HOH HOH . E 4 HOH A 2 119 2 HOH HOH . E 4 HOH A 3 120 3 HOH HOH . E 4 HOH A 4 121 8 HOH HOH . E 4 HOH A 5 122 11 HOH HOH . E 4 HOH A 6 123 12 HOH HOH . E 4 HOH A 7 124 13 HOH HOH . E 4 HOH A 8 125 14 HOH HOH . E 4 HOH A 9 126 18 HOH HOH . E 4 HOH A 10 127 20 HOH HOH . E 4 HOH A 11 128 21 HOH HOH . E 4 HOH A 12 129 23 HOH HOH . E 4 HOH A 13 130 24 HOH HOH . E 4 HOH A 14 131 25 HOH HOH . E 4 HOH A 15 132 28 HOH HOH . E 4 HOH A 16 133 30 HOH HOH . E 4 HOH A 17 134 32 HOH HOH . E 4 HOH A 18 135 33 HOH HOH . E 4 HOH A 19 136 34 HOH HOH . E 4 HOH A 20 138 44 HOH HOH . E 4 HOH A 21 139 48 HOH HOH . E 4 HOH A 22 140 52 HOH HOH . E 4 HOH A 23 141 53 HOH HOH . E 4 HOH A 24 142 58 HOH HOH . E 4 HOH A 25 143 59 HOH HOH . E 4 HOH A 26 144 60 HOH HOH . E 4 HOH A 27 145 62 HOH HOH . F 4 HOH B 1 118 6 HOH HOH . F 4 HOH B 2 119 9 HOH HOH . F 4 HOH B 3 120 10 HOH HOH . F 4 HOH B 4 121 15 HOH HOH . F 4 HOH B 5 122 16 HOH HOH . F 4 HOH B 6 123 17 HOH HOH . F 4 HOH B 7 124 19 HOH HOH . F 4 HOH B 8 125 22 HOH HOH . F 4 HOH B 9 126 26 HOH HOH . F 4 HOH B 10 127 27 HOH HOH . F 4 HOH B 11 128 29 HOH HOH . F 4 HOH B 12 129 36 HOH HOH . F 4 HOH B 13 130 38 HOH HOH . F 4 HOH B 14 131 39 HOH HOH . F 4 HOH B 15 132 40 HOH HOH . F 4 HOH B 16 133 42 HOH HOH . F 4 HOH B 17 134 43 HOH HOH . F 4 HOH B 18 135 45 HOH HOH . F 4 HOH B 19 136 46 HOH HOH . F 4 HOH B 20 137 37 HOH HOH . F 4 HOH B 21 138 50 HOH HOH . F 4 HOH B 22 139 51 HOH HOH . F 4 HOH B 23 140 54 HOH HOH . F 4 HOH B 24 141 55 HOH HOH . F 4 HOH B 25 142 56 HOH HOH . F 4 HOH B 26 143 57 HOH HOH . F 4 HOH B 27 144 61 HOH HOH . F 4 HOH B 28 145 47 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 20.8 _atom_site.Cartn_y 39.642 _atom_site.Cartn_z 39.637 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 120.08 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 117 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #