data_3LKU
#
_model_server_result.job_id            A9W0szY5CJgTzBn3S1GXYQ 
_model_server_result.datetime_utc      '2024-11-05 00:39:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3lku 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1}' 
#
_entry.id    3LKU 
#
_exptl.entry_id    3LKU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              115.13 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PROLINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3LKU 
_cell.length_a            108.733 
_cell.length_b            108.733 
_cell.length_c            169.811 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3LKU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,G,I,J 1 1 
C,D,K,L 2 1 
E,F,H,M,N 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLY 110 A GLY 118 1_555 A N MSE 111 A MSE 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale2 A C MSE 111 A MSE 119 1_555 A N ASN 112 A ASN 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale3 A C PHE 149 A PHE 157 1_555 A N MSE 150 A MSE 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? 
covale ? covale4 A C MSE 150 A MSE 158 1_555 A N LEU 151 A LEU 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale5 A C SER 156 A SER 164 1_555 A N MSE 157 A MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale6 A C MSE 157 A MSE 165 1_555 A N ILE 158 A ILE 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale7 C C MSE 1 C MSE 9 1_555 C N GLY 2 C GLY 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale8 C C GLY 110 C GLY 118 1_555 C N MSE 111 C MSE 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale9 C C MSE 111 C MSE 119 1_555 C N ASN 112 C ASN 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale10 C C PHE 149 C PHE 157 1_555 C N MSE 150 C MSE 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale11 C C MSE 150 C MSE 158 1_555 C N LEU 151 C LEU 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale12 C C SER 156 C SER 164 1_555 C N MSE 157 C MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale13 C C MSE 157 C MSE 165 1_555 C N ILE 158 C ILE 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale14 E C MSE 1 E MSE 9 1_555 E N GLY 2 E GLY 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale15 E C GLY 110 E GLY 118 1_555 E N MSE 111 E MSE 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale16 E C MSE 111 E MSE 119 1_555 E N ASN 112 E ASN 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale17 E C PHE 149 E PHE 157 1_555 E N MSE 150 E MSE 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale18 E C MSE 150 E MSE 158 1_555 E N LEU 151 E LEU 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale19 E C SER 156 E SER 164 1_555 E N MSE 157 E MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale20 E C MSE 157 E MSE 165 1_555 E N ILE 158 E ILE 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
#
_chem_comp.formula           'C5 H9 N O2' 
_chem_comp.formula_weight    115.13 
_chem_comp.id                PRO 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              PROLINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA PRO sing 260 n n 
N CD PRO sing 261 n n 
N H PRO sing 262 n n 
CA C PRO sing 263 n n 
CA CB PRO sing 264 n n 
CA HA PRO sing 265 n n 
C O PRO doub 266 n n 
C OXT PRO sing 267 n n 
CB CG PRO sing 268 n n 
CB HB2 PRO sing 269 n n 
CB HB3 PRO sing 270 n n 
CG CD PRO sing 271 n n 
CG HG2 PRO sing 272 n n 
CG HG3 PRO sing 273 n n 
CD HD2 PRO sing 274 n n 
CD HD3 PRO sing 275 n n 
OXT HXT PRO sing 276 n n 
#
_atom_sites.entry_id                     3LKU 
_atom_sites.fract_transf_matrix[1][1]    0.009197 
_atom_sites.fract_transf_matrix[1][2]    0.00531 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01062 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005889 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 PRO A 1 1 1 PRO PRO . 
H 3 PRO E 1 1 1 PRO PRO . 
I 4 HOH A 1 3 3 HOH HOH . 
I 4 HOH A 2 301 1 HOH HOH . 
I 4 HOH A 3 302 12 HOH HOH . 
I 4 HOH A 4 303 16 HOH HOH . 
I 4 HOH A 5 304 18 HOH HOH . 
I 4 HOH A 6 305 19 HOH HOH . 
I 4 HOH A 7 306 24 HOH HOH . 
I 4 HOH A 8 307 46 HOH HOH . 
I 4 HOH A 9 308 51 HOH HOH . 
I 4 HOH A 10 309 52 HOH HOH . 
I 4 HOH A 11 310 53 HOH HOH . 
I 4 HOH A 12 311 54 HOH HOH . 
I 4 HOH A 13 312 55 HOH HOH . 
I 4 HOH A 14 313 56 HOH HOH . 
I 4 HOH A 15 314 57 HOH HOH . 
I 4 HOH A 16 315 58 HOH HOH . 
I 4 HOH A 17 316 59 HOH HOH . 
I 4 HOH A 18 317 75 HOH HOH . 
I 4 HOH A 19 318 76 HOH HOH . 
I 4 HOH A 20 319 77 HOH HOH . 
I 4 HOH A 21 320 78 HOH HOH . 
J 4 HOH B 1 57 6 HOH HOH . 
J 4 HOH B 2 58 17 HOH HOH . 
J 4 HOH B 3 59 20 HOH HOH . 
J 4 HOH B 4 60 60 HOH HOH . 
J 4 HOH B 5 61 21 HOH HOH . 
J 4 HOH B 6 62 22 HOH HOH . 
J 4 HOH B 7 63 23 HOH HOH . 
J 4 HOH B 8 64 45 HOH HOH . 
K 4 HOH C 1 2 2 HOH HOH . 
K 4 HOH C 2 4 4 HOH HOH . 
K 4 HOH C 3 301 10 HOH HOH . 
K 4 HOH C 4 302 11 HOH HOH . 
K 4 HOH C 5 303 13 HOH HOH . 
K 4 HOH C 6 304 25 HOH HOH . 
K 4 HOH C 7 305 26 HOH HOH . 
K 4 HOH C 8 306 27 HOH HOH . 
K 4 HOH C 9 307 28 HOH HOH . 
K 4 HOH C 10 308 29 HOH HOH . 
K 4 HOH C 11 309 30 HOH HOH . 
K 4 HOH C 12 310 31 HOH HOH . 
K 4 HOH C 13 311 43 HOH HOH . 
K 4 HOH C 14 312 47 HOH HOH . 
K 4 HOH C 15 313 48 HOH HOH . 
K 4 HOH C 16 314 62 HOH HOH . 
K 4 HOH C 17 315 63 HOH HOH . 
K 4 HOH C 18 316 64 HOH HOH . 
K 4 HOH C 19 317 65 HOH HOH . 
K 4 HOH C 20 318 68 HOH HOH . 
K 4 HOH C 21 319 79 HOH HOH . 
K 4 HOH C 22 320 80 HOH HOH . 
L 4 HOH D 1 57 7 HOH HOH . 
L 4 HOH D 2 58 14 HOH HOH . 
L 4 HOH D 3 59 32 HOH HOH . 
L 4 HOH D 4 60 49 HOH HOH . 
L 4 HOH D 5 61 61 HOH HOH . 
L 4 HOH D 6 62 50 HOH HOH . 
L 4 HOH D 7 69 69 HOH HOH . 
L 4 HOH D 8 71 71 HOH HOH . 
L 4 HOH D 9 73 73 HOH HOH . 
L 4 HOH D 10 74 74 HOH HOH . 
L 4 HOH D 11 81 81 HOH HOH . 
L 4 HOH D 12 82 82 HOH HOH . 
M 4 HOH E 1 5 5 HOH HOH . 
M 4 HOH E 2 8 8 HOH HOH . 
M 4 HOH E 3 301 15 HOH HOH . 
M 4 HOH E 4 302 33 HOH HOH . 
M 4 HOH E 5 303 34 HOH HOH . 
M 4 HOH E 6 304 35 HOH HOH . 
M 4 HOH E 7 305 37 HOH HOH . 
M 4 HOH E 8 306 38 HOH HOH . 
M 4 HOH E 9 307 39 HOH HOH . 
M 4 HOH E 10 308 40 HOH HOH . 
M 4 HOH E 11 309 41 HOH HOH . 
M 4 HOH E 12 310 42 HOH HOH . 
M 4 HOH E 13 311 44 HOH HOH . 
M 4 HOH E 14 312 66 HOH HOH . 
M 4 HOH E 15 313 67 HOH HOH . 
M 4 HOH E 16 314 70 HOH HOH . 
M 4 HOH E 17 315 72 HOH HOH . 
M 4 HOH E 18 316 83 HOH HOH . 
M 4 HOH E 19 317 84 HOH HOH . 
N 4 HOH F 1 57 9 HOH HOH . 
N 4 HOH F 2 58 36 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N PRO . . . G 3 6.002 35.021 50.894 1 89.11 ? N PRO 1 A 1 
HETATM 2 C CA PRO . . . G 3 6.721 35.623 52.006 1 96.85 ? CA PRO 1 A 1 
HETATM 3 C C PRO . . . G 3 7.051 34.575 53.053 1 91.68 ? C PRO 1 A 1 
HETATM 4 O O PRO . . . G 3 6.701 33.42 52.883 1 93.09 ? O PRO 1 A 1 
HETATM 5 C CB PRO . . . G 3 5.713 36.643 52.581 1 103.9 ? CB PRO 1 A 1 
HETATM 6 C CG PRO . . . G 3 4.407 36.42 51.849 1 101.13 ? CG PRO 1 A 1 
HETATM 7 C CD PRO . . . G 3 4.549 35.15 51.06 1 96.97 ? CD PRO 1 A 1 
HETATM 8 O OXT PRO . . . G 3 7.653 34.839 54.09 1 90.49 ? OXT PRO 1 A 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           8 
#