data_3LMV # _model_server_result.job_id GQjB9hQD0oeSFu0VP8L3PA _model_server_result.datetime_utc '2024-11-15 23:01:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lmv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":165}' # _entry.id 3LMV # _exptl.entry_id 3LMV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 75.4 _cell.angle_beta 74.2 _cell.angle_gamma 86.1 _cell.entry_id 3LMV _cell.length_a 51.65 _cell.length_b 52.95 _cell.length_c 89.68 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LMV _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,I,J,K 1 1 C,D,L,M 2 1 E,F,N 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 L N N ? 2 M N N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 3LMV _atom_sites.fract_transf_matrix[1][1] 0.01936 _atom_sites.fract_transf_matrix[1][2] -0.001326 _atom_sites.fract_transf_matrix[1][3] -0.005333 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018929 _atom_sites.fract_transf_matrix[2][3] -0.004735 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011948 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 EPE A 1 165 3 EPE EPE . H 2 EPE B 1 165 1 EPE EPE . I 2 EPE B 1 166 5 EPE EPE . J 3 SO3 B 1 167 1 SO3 SO3 . K 3 SO3 B 1 168 3 SO3 SO3 . L 2 EPE C 1 165 4 EPE EPE . M 2 EPE D 1 165 2 EPE EPE . N 3 SO3 F 1 165 2 SO3 SO3 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . G 2 -9.624 5.25 8.585 1 78.11 ? N1 EPE 165 A 1 HETATM 2 C C2 EPE . . . G 2 -10.662 6.12 9.175 0.93 78.24 ? C2 EPE 165 A 1 HETATM 3 C C3 EPE . . . G 2 -11.412 6.947 8.121 1 77.08 ? C3 EPE 165 A 1 HETATM 4 N N4 EPE . . . G 2 -10.622 7.199 6.93 0.45 72.94 ? N4 EPE 165 A 1 HETATM 5 C C5 EPE . . . G 2 -9.948 6.084 6.289 1 76.08 ? C5 EPE 165 A 1 HETATM 6 C C6 EPE . . . G 2 -9.904 4.853 7.194 0.91 80.29 ? C6 EPE 165 A 1 HETATM 7 C C7 EPE . . . G 2 -10.69 8.494 6.271 1 66.69 ? C7 EPE 165 A 1 HETATM 8 C C8 EPE . . . G 2 -11.9 8.671 5.352 1 70.24 ? C8 EPE 165 A 1 HETATM 9 O O8 EPE . . . G 2 -11.879 9.966 4.78 1 86.26 ? O8 EPE 165 A 1 HETATM 10 C C9 EPE . . . G 2 -9.382 4.057 9.408 1 78.22 ? C9 EPE 165 A 1 HETATM 11 C C10 EPE . . . G 2 -10.412 2.989 9.054 1 69.75 ? C10 EPE 165 A 1 HETATM 12 S S EPE . . . G 2 -10.279 1.503 10.089 0.37 75.91 ? S EPE 165 A 1 HETATM 13 O O1S EPE . . . G 2 -11.583 1.257 10.707 1 72.04 ? O1S EPE 165 A 1 HETATM 14 O O2S EPE . . . G 2 -9.239 1.703 11.109 1 69.07 ? O2S EPE 165 A 1 HETATM 15 O O3S EPE . . . G 2 -9.937 0.343 9.266 1 67.3 ? O3S EPE 165 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #