data_3LMV
#
_model_server_result.job_id            5DidHtGJHIE18Rvzkb1FTA 
_model_server_result.datetime_utc      '2024-11-15 22:43:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3lmv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":165}' 
#
_entry.id    3LMV 
#
_exptl.entry_id    3LMV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         75.4 
_cell.angle_beta          74.2 
_cell.angle_gamma         86.1 
_cell.entry_id            3LMV 
_cell.length_a            51.65 
_cell.length_b            52.95 
_cell.length_c            89.68 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3LMV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,G,H,I,J,K 1 1 
C,D,L,M 2 1 
E,F,N 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 L N N 
? 2 M N N 
#
_chem_comp.formula           'C8 H18 N2 O4 S' 
_chem_comp.formula_weight    238.305 
_chem_comp.id                EPE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEPES 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 EPE sing 83 n n 
N1 C6 EPE sing 84 n n 
N1 C9 EPE sing 85 n n 
C2 C3 EPE sing 86 n n 
C2 H21 EPE sing 87 n n 
C2 H22 EPE sing 88 n n 
C3 N4 EPE sing 89 n n 
C3 H31 EPE sing 90 n n 
C3 H32 EPE sing 91 n n 
N4 C5 EPE sing 92 n n 
N4 C7 EPE sing 93 n n 
C5 C6 EPE sing 94 n n 
C5 H51 EPE sing 95 n n 
C5 H52 EPE sing 96 n n 
C6 H61 EPE sing 97 n n 
C6 H62 EPE sing 98 n n 
C7 C8 EPE sing 99 n n 
C7 H71 EPE sing 100 n n 
C7 H72 EPE sing 101 n n 
C8 O8 EPE sing 102 n n 
C8 H81 EPE sing 103 n n 
C8 H82 EPE sing 104 n n 
O8 HO8 EPE sing 105 n n 
C9 C10 EPE sing 106 n n 
C9 H91 EPE sing 107 n n 
C9 H92 EPE sing 108 n n 
C10 S EPE sing 109 n n 
C10 H101 EPE sing 110 n n 
C10 H102 EPE sing 111 n n 
S O1S EPE doub 112 n n 
S O2S EPE doub 113 n n 
S O3S EPE sing 114 n n 
O3S HOS3 EPE sing 115 n n 
#
_atom_sites.entry_id                     3LMV 
_atom_sites.fract_transf_matrix[1][1]    0.01936 
_atom_sites.fract_transf_matrix[1][2]    -0.001326 
_atom_sites.fract_transf_matrix[1][3]    -0.005333 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018929 
_atom_sites.fract_transf_matrix[2][3]    -0.004735 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011948 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 EPE A 1 165 3 EPE EPE . 
H 2 EPE B 1 165 1 EPE EPE . 
I 2 EPE B 1 166 5 EPE EPE . 
J 3 SO3 B 1 167 1 SO3 SO3 . 
K 3 SO3 B 1 168 3 SO3 SO3 . 
L 2 EPE C 1 165 4 EPE EPE . 
M 2 EPE D 1 165 2 EPE EPE . 
N 3 SO3 F 1 165 2 SO3 SO3 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 EPE . . . M 2 -40.664 -18.874 -22.272 1 75.24 ? N1 EPE 165 D 1 
HETATM 2 C C2 EPE . . . M 2 -39.386 -18.132 -22.165 1 73.07 ? C2 EPE 165 D 1 
HETATM 3 C C3 EPE . . . M 2 -39.35 -17.132 -21.005 1 67.16 ? C3 EPE 165 D 1 
HETATM 4 N N4 EPE . . . M 2 -39.715 -17.749 -19.743 1 72.74 ? N4 EPE 165 D 1 
HETATM 5 C C5 EPE . . . M 2 -40.586 -18.9 -19.805 1 60.23 ? C5 EPE 165 D 1 
HETATM 6 C C6 EPE . . . M 2 -41.469 -18.842 -21.039 1 51.93 ? C6 EPE 165 D 1 
HETATM 7 C C7 EPE . . . M 2 -38.839 -17.613 -18.593 1 49.79 ? C7 EPE 165 D 1 
HETATM 8 C C8 EPE . . . M 2 -38.079 -16.294 -18.642 1 69.38 ? C8 EPE 165 D 1 
HETATM 9 O O8 EPE . . . M 2 -37.216 -16.191 -17.528 1 69.71 ? O8 EPE 165 D 1 
HETATM 10 C C9 EPE . . . M 2 -41.481 -18.37 -23.393 1 58.65 ? C9 EPE 165 D 1 
HETATM 11 C C10 EPE . . . M 2 -41.049 -18.928 -24.747 1 57.53 ? C10 EPE 165 D 1 
HETATM 12 S S EPE . . . M 2 -42.414 -18.846 -25.933 0.72 72.79 ? S EPE 165 D 1 
HETATM 13 O O1S EPE . . . M 2 -41.954 -18.925 -27.321 1 55.12 ? O1S EPE 165 D 1 
HETATM 14 O O2S EPE . . . M 2 -43.122 -17.574 -25.773 0.67 69.26 ? O2S EPE 165 D 1 
HETATM 15 O O3S EPE . . . M 2 -43.307 -19.975 -25.637 1 82.67 ? O3S EPE 165 D 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    64 
_model_server_stats.query_time_ms           475 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           15 
#