data_3LNB # _model_server_result.job_id MN7vDHAW28LxVPc1X2hJiQ _model_server_result.datetime_utc '2024-11-05 01:20:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lnb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1003}' # _entry.id 3LNB # _exptl.entry_id 3LNB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LNB _cell.length_a 53.99 _cell.length_b 53.99 _cell.length_c 172.44 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LNB _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 169 n n C O2 FMT sing 170 n n C H FMT sing 171 n n O2 HO2 FMT sing 172 n n # _atom_sites.entry_id 3LNB _atom_sites.fract_transf_matrix[1][1] 0.018522 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018522 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005799 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 COA A 1 1001 1001 COA COA . C 3 FMT A 1 1002 1002 FMT FMT . D 3 FMT A 1 1003 1003 FMT FMT . E 4 HOH A 1 281 281 HOH HOH . E 4 HOH A 2 282 282 HOH HOH . E 4 HOH A 3 283 283 HOH HOH . E 4 HOH A 4 284 284 HOH HOH . E 4 HOH A 5 285 285 HOH HOH . E 4 HOH A 6 286 286 HOH HOH . E 4 HOH A 7 287 287 HOH HOH . E 4 HOH A 8 288 288 HOH HOH . E 4 HOH A 9 289 289 HOH HOH . E 4 HOH A 10 290 290 HOH HOH . E 4 HOH A 11 291 291 HOH HOH . E 4 HOH A 12 292 292 HOH HOH . E 4 HOH A 13 293 293 HOH HOH . E 4 HOH A 14 294 294 HOH HOH . E 4 HOH A 15 295 295 HOH HOH . E 4 HOH A 16 296 296 HOH HOH . E 4 HOH A 17 297 297 HOH HOH . E 4 HOH A 18 298 298 HOH HOH . E 4 HOH A 19 299 299 HOH HOH . E 4 HOH A 20 300 300 HOH HOH . E 4 HOH A 21 301 301 HOH HOH . E 4 HOH A 22 302 302 HOH HOH . E 4 HOH A 23 303 303 HOH HOH . E 4 HOH A 24 304 304 HOH HOH . E 4 HOH A 25 305 305 HOH HOH . E 4 HOH A 26 306 306 HOH HOH . E 4 HOH A 27 307 307 HOH HOH . E 4 HOH A 28 308 308 HOH HOH . E 4 HOH A 29 309 309 HOH HOH . E 4 HOH A 30 310 310 HOH HOH . E 4 HOH A 31 311 311 HOH HOH . E 4 HOH A 32 312 312 HOH HOH . E 4 HOH A 33 313 313 HOH HOH . E 4 HOH A 34 314 314 HOH HOH . E 4 HOH A 35 315 315 HOH HOH . E 4 HOH A 36 316 316 HOH HOH . E 4 HOH A 37 317 317 HOH HOH . E 4 HOH A 38 318 318 HOH HOH . E 4 HOH A 39 319 319 HOH HOH . E 4 HOH A 40 320 320 HOH HOH . E 4 HOH A 41 321 321 HOH HOH . E 4 HOH A 42 322 322 HOH HOH . E 4 HOH A 43 323 323 HOH HOH . E 4 HOH A 44 324 324 HOH HOH . E 4 HOH A 45 325 325 HOH HOH . E 4 HOH A 46 326 326 HOH HOH . E 4 HOH A 47 327 327 HOH HOH . E 4 HOH A 48 328 328 HOH HOH . E 4 HOH A 49 329 329 HOH HOH . E 4 HOH A 50 330 330 HOH HOH . E 4 HOH A 51 331 331 HOH HOH . E 4 HOH A 52 332 332 HOH HOH . E 4 HOH A 53 333 333 HOH HOH . E 4 HOH A 54 334 334 HOH HOH . E 4 HOH A 55 335 335 HOH HOH . E 4 HOH A 56 336 336 HOH HOH . E 4 HOH A 57 337 337 HOH HOH . E 4 HOH A 58 338 338 HOH HOH . E 4 HOH A 59 339 339 HOH HOH . E 4 HOH A 60 340 340 HOH HOH . E 4 HOH A 61 341 341 HOH HOH . E 4 HOH A 62 342 342 HOH HOH . E 4 HOH A 63 343 343 HOH HOH . E 4 HOH A 64 344 344 HOH HOH . E 4 HOH A 65 345 345 HOH HOH . E 4 HOH A 66 346 346 HOH HOH . E 4 HOH A 67 347 347 HOH HOH . E 4 HOH A 68 348 348 HOH HOH . E 4 HOH A 69 349 349 HOH HOH . E 4 HOH A 70 350 350 HOH HOH . E 4 HOH A 71 351 351 HOH HOH . E 4 HOH A 72 352 352 HOH HOH . E 4 HOH A 73 353 353 HOH HOH . E 4 HOH A 74 354 354 HOH HOH . E 4 HOH A 75 355 355 HOH HOH . E 4 HOH A 76 356 356 HOH HOH . E 4 HOH A 77 357 357 HOH HOH . E 4 HOH A 78 358 358 HOH HOH . E 4 HOH A 79 359 359 HOH HOH . E 4 HOH A 80 360 360 HOH HOH . E 4 HOH A 81 361 361 HOH HOH . E 4 HOH A 82 362 362 HOH HOH . E 4 HOH A 83 363 363 HOH HOH . E 4 HOH A 84 364 364 HOH HOH . E 4 HOH A 85 365 365 HOH HOH . E 4 HOH A 86 366 366 HOH HOH . E 4 HOH A 87 367 367 HOH HOH . E 4 HOH A 88 368 368 HOH HOH . E 4 HOH A 89 369 369 HOH HOH . E 4 HOH A 90 370 370 HOH HOH . E 4 HOH A 91 371 371 HOH HOH . E 4 HOH A 92 372 372 HOH HOH . E 4 HOH A 93 373 373 HOH HOH . E 4 HOH A 94 374 374 HOH HOH . E 4 HOH A 95 375 375 HOH HOH . E 4 HOH A 96 376 376 HOH HOH . E 4 HOH A 97 377 377 HOH HOH . E 4 HOH A 98 378 378 HOH HOH . E 4 HOH A 99 379 379 HOH HOH . E 4 HOH A 100 380 380 HOH HOH . E 4 HOH A 101 381 381 HOH HOH . E 4 HOH A 102 382 382 HOH HOH . E 4 HOH A 103 383 383 HOH HOH . E 4 HOH A 104 384 384 HOH HOH . E 4 HOH A 105 385 385 HOH HOH . E 4 HOH A 106 386 386 HOH HOH . E 4 HOH A 107 387 387 HOH HOH . E 4 HOH A 108 388 388 HOH HOH . E 4 HOH A 109 389 389 HOH HOH . E 4 HOH A 110 390 390 HOH HOH . E 4 HOH A 111 391 391 HOH HOH . E 4 HOH A 112 392 392 HOH HOH . E 4 HOH A 113 393 393 HOH HOH . E 4 HOH A 114 394 394 HOH HOH . E 4 HOH A 115 395 395 HOH HOH . E 4 HOH A 116 396 396 HOH HOH . E 4 HOH A 117 397 397 HOH HOH . E 4 HOH A 118 398 398 HOH HOH . E 4 HOH A 119 399 399 HOH HOH . E 4 HOH A 120 400 400 HOH HOH . E 4 HOH A 121 401 401 HOH HOH . E 4 HOH A 122 402 402 HOH HOH . E 4 HOH A 123 403 403 HOH HOH . E 4 HOH A 124 404 404 HOH HOH . E 4 HOH A 125 405 405 HOH HOH . E 4 HOH A 126 406 406 HOH HOH . E 4 HOH A 127 407 407 HOH HOH . E 4 HOH A 128 408 408 HOH HOH . E 4 HOH A 129 409 409 HOH HOH . E 4 HOH A 130 410 410 HOH HOH . E 4 HOH A 131 411 411 HOH HOH . E 4 HOH A 132 412 412 HOH HOH . E 4 HOH A 133 413 413 HOH HOH . E 4 HOH A 134 414 414 HOH HOH . E 4 HOH A 135 415 415 HOH HOH . E 4 HOH A 136 416 416 HOH HOH . E 4 HOH A 137 417 417 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . D 3 -10.343 12.016 -3.927 1 27.03 ? C FMT 1003 A 1 HETATM 2 O O1 FMT . . . D 3 -9.364 11.373 -3.604 1 27.75 ? O1 FMT 1003 A 1 HETATM 3 O O2 FMT . . . D 3 -10.4 13.336 -3.676 1 23.61 ? O2 FMT 1003 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 3 #