data_3LO4 # _model_server_result.job_id kGKf-92BDCFdUXWNj9h_kA _model_server_result.datetime_utc '2024-12-12 20:14:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lo4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":31}' # _entry.id 3LO4 # _exptl.entry_id 3LO4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LO4 _cell.length_a 46.627 _cell.length_b 48.673 _cell.length_c 24.557 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LO4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,F 1 1 B,C,D,E,G 2 1 A,B,C,D,E,F,G 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 A CYS 2 1_555 A SG CYS 30 A CYS 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf2 A SG CYS 4 A CYS 4 1_555 A SG CYS 19 A CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? disulf ? disulf3 A SG CYS 9 A CYS 9 1_555 A SG CYS 29 A CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 B SG CYS 2 B CYS 2 1_555 B SG CYS 30 B CYS 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 B SG CYS 4 B CYS 4 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 B SG CYS 9 B CYS 9 1_555 B SG CYS 29 B CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 142 n n C1 C2 PEG sing 143 n n C1 H11 PEG sing 144 n n C1 H12 PEG sing 145 n n O1 HO1 PEG sing 146 n n C2 O2 PEG sing 147 n n C2 H21 PEG sing 148 n n C2 H22 PEG sing 149 n n O2 C3 PEG sing 150 n n C3 C4 PEG sing 151 n n C3 H31 PEG sing 152 n n C3 H32 PEG sing 153 n n C4 O4 PEG sing 154 n n C4 H41 PEG sing 155 n n C4 H42 PEG sing 156 n n O4 HO4 PEG sing 157 n n # _atom_sites.entry_id 3LO4 _atom_sites.fract_transf_matrix[1][1] 0.021447 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020545 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.040722 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEG B 1 6073 6073 PEG PEG . D 2 PEG B 1 31 31 PEG PEG . E 3 CL B 1 33 33 CL CL . F 4 HOH A 1 31 31 HOH HOH . F 4 HOH A 2 32 32 HOH HOH . F 4 HOH A 3 33 33 HOH HOH . F 4 HOH A 4 34 34 HOH HOH . F 4 HOH A 5 35 35 HOH HOH . F 4 HOH A 6 36 36 HOH HOH . F 4 HOH A 7 37 37 HOH HOH . F 4 HOH A 8 38 38 HOH HOH . F 4 HOH A 9 39 39 HOH HOH . F 4 HOH A 10 40 40 HOH HOH . F 4 HOH A 11 41 41 HOH HOH . F 4 HOH A 12 42 42 HOH HOH . F 4 HOH A 13 43 43 HOH HOH . F 4 HOH A 14 44 44 HOH HOH . F 4 HOH A 15 45 45 HOH HOH . F 4 HOH A 16 46 46 HOH HOH . F 4 HOH A 17 47 47 HOH HOH . F 4 HOH A 18 48 48 HOH HOH . F 4 HOH A 19 49 49 HOH HOH . F 4 HOH A 20 50 50 HOH HOH . F 4 HOH A 21 51 51 HOH HOH . F 4 HOH A 22 52 52 HOH HOH . F 4 HOH A 23 53 53 HOH HOH . F 4 HOH A 24 54 54 HOH HOH . F 4 HOH A 25 55 55 HOH HOH . F 4 HOH A 26 57 57 HOH HOH . G 4 HOH B 1 34 34 HOH HOH . G 4 HOH B 2 35 35 HOH HOH . G 4 HOH B 3 36 36 HOH HOH . G 4 HOH B 4 37 37 HOH HOH . G 4 HOH B 5 38 38 HOH HOH . G 4 HOH B 6 39 39 HOH HOH . G 4 HOH B 7 40 40 HOH HOH . G 4 HOH B 8 41 41 HOH HOH . G 4 HOH B 9 42 42 HOH HOH . G 4 HOH B 10 43 43 HOH HOH . G 4 HOH B 11 44 44 HOH HOH . G 4 HOH B 12 45 45 HOH HOH . G 4 HOH B 13 46 46 HOH HOH . G 4 HOH B 14 47 47 HOH HOH . G 4 HOH B 15 48 48 HOH HOH . G 4 HOH B 16 49 49 HOH HOH . G 4 HOH B 17 50 50 HOH HOH . G 4 HOH B 18 51 51 HOH HOH . G 4 HOH B 19 52 52 HOH HOH . G 4 HOH B 20 53 53 HOH HOH . G 4 HOH B 21 54 54 HOH HOH . G 4 HOH B 22 55 55 HOH HOH . G 4 HOH B 23 56 56 HOH HOH . G 4 HOH B 24 57 57 HOH HOH . G 4 HOH B 25 58 58 HOH HOH . G 4 HOH B 26 59 59 HOH HOH . G 4 HOH B 27 60 60 HOH HOH . G 4 HOH B 28 61 61 HOH HOH . G 4 HOH B 29 62 62 HOH HOH . G 4 HOH B 30 63 63 HOH HOH . G 4 HOH B 31 64 64 HOH HOH . G 4 HOH B 32 65 65 HOH HOH . G 4 HOH B 33 66 66 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 2 6.244 -11.158 -18.744 1 45.49 ? C1 PEG 31 B 1 HETATM 2 O O1 PEG . . . D 2 6.957 -9.885 -18.806 1 47.82 ? O1 PEG 31 B 1 HETATM 3 C C2 PEG . . . D 2 7.188 -12.339 -18.952 1 46.73 ? C2 PEG 31 B 1 HETATM 4 O O2 PEG . . . D 2 6.756 -13.292 -19.942 1 45.86 ? O2 PEG 31 B 1 HETATM 5 C C3 PEG . . . D 2 7.796 -13.852 -20.762 1 45 ? C3 PEG 31 B 1 HETATM 6 C C4 PEG . . . D 2 7.878 -13.224 -22.155 1 47.07 ? C4 PEG 31 B 1 HETATM 7 O O4 PEG . . . D 2 9.213 -13.386 -22.653 1 47.85 ? O4 PEG 31 B 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 738 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 7 #