data_3LO5
#
_model_server_result.job_id            BI_CE0TqZrOgt2KEiEX7Rw 
_model_server_result.datetime_utc      '2025-01-10 08:54:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3lo5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":168}' 
#
_entry.id    3LO5 
#
_exptl.entry_id    3LO5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3LO5 
_cell.length_a            92.475 
_cell.length_b            102.184 
_cell.length_c            117.82 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3LO5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,L 1 1 
B,F,G,H,M 2 1 
C,I,J,K,N 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 H N N 
? 3 J N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 E CA CA . A CA 167 1_555 D O1A GDP . A GDP 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? 
metalc ? metalc2 H CA CA . C CA 168 1_555 F O1A GDP . C GDP 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.823 ? 
metalc ? metalc3 H CA CA . C CA 168 1_555 F O2B GDP . C GDP 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.98 ? 
metalc ? metalc4 C OD2 ASP 30 E ASP 30 1_555 K CA CA . E CA 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? 
metalc ? metalc5 C OD2 ASP 33 E ASP 33 1_555 J CA CA . E CA 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? 
metalc ? metalc6 J CA CA . E CA 167 1_555 N O HOH . E HOH 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.846 ? 
metalc ? metalc7 J CA CA . E CA 167 1_555 I O1A GDP . E GDP 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3LO5 
_atom_sites.fract_transf_matrix[1][1]    0.010814 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009786 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008488 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 GDP A 1 180 180 GDP GDP . 
E 3 CA A 1 167 167 CA CA . 
F 2 GDP C 1 180 180 GDP GDP . 
G 4 SO4 C 1 167 167 SO4 SO4 . 
H 3 CA C 1 168 168 CA CA . 
I 2 GDP E 1 180 180 GDP GDP . 
J 3 CA E 1 167 167 CA CA . 
K 3 CA E 1 168 168 CA CA . 
L 5 HOH A 1 168 168 HOH HOH . 
L 5 HOH A 2 169 169 HOH HOH . 
L 5 HOH A 3 170 170 HOH HOH . 
L 5 HOH A 4 171 171 HOH HOH . 
L 5 HOH A 5 172 172 HOH HOH . 
L 5 HOH A 6 173 173 HOH HOH . 
L 5 HOH A 7 174 174 HOH HOH . 
L 5 HOH A 8 175 175 HOH HOH . 
L 5 HOH A 9 176 176 HOH HOH . 
L 5 HOH A 10 177 177 HOH HOH . 
L 5 HOH A 11 178 178 HOH HOH . 
L 5 HOH A 12 179 179 HOH HOH . 
L 5 HOH A 13 181 181 HOH HOH . 
L 5 HOH A 14 182 182 HOH HOH . 
L 5 HOH A 15 183 183 HOH HOH . 
L 5 HOH A 16 184 184 HOH HOH . 
L 5 HOH A 17 185 185 HOH HOH . 
L 5 HOH A 18 187 187 HOH HOH . 
M 5 HOH C 1 169 169 HOH HOH . 
M 5 HOH C 2 170 170 HOH HOH . 
M 5 HOH C 3 171 171 HOH HOH . 
M 5 HOH C 4 172 172 HOH HOH . 
M 5 HOH C 5 173 173 HOH HOH . 
M 5 HOH C 6 174 174 HOH HOH . 
M 5 HOH C 7 175 175 HOH HOH . 
M 5 HOH C 8 176 176 HOH HOH . 
M 5 HOH C 9 177 177 HOH HOH . 
M 5 HOH C 10 178 178 HOH HOH . 
M 5 HOH C 11 179 179 HOH HOH . 
M 5 HOH C 12 181 181 HOH HOH . 
M 5 HOH C 13 182 182 HOH HOH . 
M 5 HOH C 14 183 183 HOH HOH . 
M 5 HOH C 15 184 184 HOH HOH . 
M 5 HOH C 16 185 185 HOH HOH . 
M 5 HOH C 17 186 186 HOH HOH . 
M 5 HOH C 18 187 187 HOH HOH . 
M 5 HOH C 19 188 188 HOH HOH . 
M 5 HOH C 20 189 189 HOH HOH . 
M 5 HOH C 21 190 190 HOH HOH . 
M 5 HOH C 22 191 191 HOH HOH . 
M 5 HOH C 23 192 192 HOH HOH . 
M 5 HOH C 24 193 193 HOH HOH . 
M 5 HOH C 25 194 194 HOH HOH . 
M 5 HOH C 26 195 195 HOH HOH . 
M 5 HOH C 27 196 196 HOH HOH . 
M 5 HOH C 28 197 197 HOH HOH . 
N 5 HOH E 1 169 169 HOH HOH . 
N 5 HOH E 2 170 170 HOH HOH . 
N 5 HOH E 3 171 171 HOH HOH . 
N 5 HOH E 4 172 172 HOH HOH . 
N 5 HOH E 5 173 173 HOH HOH . 
N 5 HOH E 6 174 174 HOH HOH . 
N 5 HOH E 7 175 175 HOH HOH . 
N 5 HOH E 8 176 176 HOH HOH . 
N 5 HOH E 9 177 177 HOH HOH . 
N 5 HOH E 10 178 178 HOH HOH . 
N 5 HOH E 11 179 179 HOH HOH . 
N 5 HOH E 12 181 181 HOH HOH . 
N 5 HOH E 13 182 182 HOH HOH . 
N 5 HOH E 14 183 183 HOH HOH . 
N 5 HOH E 15 185 185 HOH HOH . 
N 5 HOH E 16 186 186 HOH HOH . 
N 5 HOH E 17 187 187 HOH HOH . 
N 5 HOH E 18 188 188 HOH HOH . 
N 5 HOH E 19 189 189 HOH HOH . 
N 5 HOH E 20 190 190 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         K 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               0 
_atom_site.Cartn_y               -31.4 
_atom_site.Cartn_z               -58.91 
_atom_site.occupancy             0.5 
_atom_site.B_iso_or_equiv        76.13 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           168 
_atom_site.auth_asym_id          E 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#