data_3LON # _model_server_result.job_id LDRZYL3vzmttMwecGlqbJQ _model_server_result.datetime_utc '2024-11-08 15:46:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lon # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":901}' # _entry.id 3LON # _exptl.entry_id 3LON _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3LON _cell.length_a 224.392 _cell.length_b 224.392 _cell.length_c 75.331 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LON _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L 1 1 A,B,E,F,G,I,J 2 1 C,D,H,K,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 27 A CYS 16 1_555 G S2 BME . A BME 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale2 A OG SER 150 A SER 139 1_555 F C43 NNA . A NNA 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.49 ? metalc ? metalc1 A SG CYS 108 A CYS 97 1_555 E ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc2 A SG CYS 110 A CYS 99 1_555 E ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc3 A SG CYS 156 A CYS 145 1_555 E ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc4 I O HOH . A HOH 190 1_555 E ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc5 C SG CYS 108 C CYS 97 1_555 H ZN ZN . C ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc6 C SG CYS 110 C CYS 99 1_555 H ZN ZN . C ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc7 C SG CYS 156 C CYS 145 1_555 H ZN ZN . C ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc8 K O HOH . C HOH 190 1_555 H ZN ZN . C ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3LON _atom_sites.fract_transf_matrix[1][1] 0.004456 _atom_sites.fract_transf_matrix[1][2] 0.002573 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005146 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013275 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 901 901 ZN ZN . F 4 NNA A 1 999 999 NNA NNA . G 5 BME A 1 998 998 BME BME . H 3 ZN C 1 902 902 ZN ZN . I 6 HOH A 1 190 2 HOH HOH . I 6 HOH A 2 191 191 HOH HOH . I 6 HOH A 3 192 192 HOH HOH . I 6 HOH A 4 193 193 HOH HOH . I 6 HOH A 5 194 3 HOH HOH . I 6 HOH A 6 195 195 HOH HOH . I 6 HOH A 7 196 196 HOH HOH . I 6 HOH A 8 197 6 HOH HOH . I 6 HOH A 9 198 198 HOH HOH . I 6 HOH A 10 199 199 HOH HOH . I 6 HOH A 11 200 200 HOH HOH . I 6 HOH A 12 201 7 HOH HOH . I 6 HOH A 13 202 202 HOH HOH . I 6 HOH A 14 203 203 HOH HOH . I 6 HOH A 15 204 8 HOH HOH . I 6 HOH A 16 205 205 HOH HOH . I 6 HOH A 17 206 206 HOH HOH . I 6 HOH A 18 207 9 HOH HOH . I 6 HOH A 19 208 208 HOH HOH . I 6 HOH A 20 209 10 HOH HOH . I 6 HOH A 21 210 210 HOH HOH . I 6 HOH A 22 211 211 HOH HOH . I 6 HOH A 23 212 212 HOH HOH . I 6 HOH A 24 213 14 HOH HOH . I 6 HOH A 25 214 16 HOH HOH . I 6 HOH A 26 215 17 HOH HOH . I 6 HOH A 27 216 216 HOH HOH . I 6 HOH A 28 217 18 HOH HOH . I 6 HOH A 29 218 218 HOH HOH . I 6 HOH A 30 219 219 HOH HOH . I 6 HOH A 31 220 220 HOH HOH . I 6 HOH A 32 221 221 HOH HOH . I 6 HOH A 33 222 222 HOH HOH . I 6 HOH A 34 223 19 HOH HOH . I 6 HOH A 35 224 23 HOH HOH . I 6 HOH A 36 225 26 HOH HOH . I 6 HOH A 37 226 27 HOH HOH . I 6 HOH A 38 227 32 HOH HOH . I 6 HOH A 39 228 35 HOH HOH . I 6 HOH A 40 229 36 HOH HOH . I 6 HOH A 41 230 41 HOH HOH . I 6 HOH A 42 231 42 HOH HOH . I 6 HOH A 43 232 43 HOH HOH . I 6 HOH A 44 233 46 HOH HOH . I 6 HOH A 45 234 48 HOH HOH . I 6 HOH A 46 235 50 HOH HOH . I 6 HOH A 47 236 51 HOH HOH . I 6 HOH A 48 237 52 HOH HOH . I 6 HOH A 49 238 53 HOH HOH . I 6 HOH A 50 239 55 HOH HOH . I 6 HOH A 51 240 57 HOH HOH . I 6 HOH A 52 241 58 HOH HOH . I 6 HOH A 53 242 60 HOH HOH . I 6 HOH A 54 243 63 HOH HOH . I 6 HOH A 55 244 65 HOH HOH . I 6 HOH A 56 245 66 HOH HOH . I 6 HOH A 57 246 69 HOH HOH . I 6 HOH A 58 247 70 HOH HOH . I 6 HOH A 59 248 72 HOH HOH . I 6 HOH A 60 249 74 HOH HOH . I 6 HOH A 61 250 75 HOH HOH . I 6 HOH A 62 251 76 HOH HOH . I 6 HOH A 63 252 77 HOH HOH . I 6 HOH A 64 253 80 HOH HOH . I 6 HOH A 65 254 83 HOH HOH . I 6 HOH A 66 255 85 HOH HOH . I 6 HOH A 67 256 86 HOH HOH . I 6 HOH A 68 257 87 HOH HOH . I 6 HOH A 69 258 88 HOH HOH . I 6 HOH A 70 259 92 HOH HOH . I 6 HOH A 71 260 93 HOH HOH . I 6 HOH A 72 261 95 HOH HOH . I 6 HOH A 73 262 97 HOH HOH . I 6 HOH A 74 263 99 HOH HOH . I 6 HOH A 75 264 100 HOH HOH . I 6 HOH A 76 265 101 HOH HOH . I 6 HOH A 77 266 103 HOH HOH . I 6 HOH A 78 267 105 HOH HOH . I 6 HOH A 79 268 106 HOH HOH . I 6 HOH A 80 269 107 HOH HOH . I 6 HOH A 81 270 108 HOH HOH . I 6 HOH A 82 271 111 HOH HOH . I 6 HOH A 83 272 112 HOH HOH . I 6 HOH A 84 273 113 HOH HOH . I 6 HOH A 85 274 114 HOH HOH . I 6 HOH A 86 275 116 HOH HOH . I 6 HOH A 87 276 118 HOH HOH . I 6 HOH A 88 277 119 HOH HOH . I 6 HOH A 89 278 123 HOH HOH . I 6 HOH A 90 279 125 HOH HOH . I 6 HOH A 91 280 126 HOH HOH . I 6 HOH A 92 281 128 HOH HOH . I 6 HOH A 93 282 129 HOH HOH . I 6 HOH A 94 283 130 HOH HOH . I 6 HOH A 95 284 131 HOH HOH . I 6 HOH A 96 285 134 HOH HOH . I 6 HOH A 97 286 135 HOH HOH . I 6 HOH A 98 287 136 HOH HOH . I 6 HOH A 99 288 137 HOH HOH . I 6 HOH A 100 289 138 HOH HOH . I 6 HOH A 101 290 140 HOH HOH . I 6 HOH A 102 291 146 HOH HOH . I 6 HOH A 103 292 148 HOH HOH . I 6 HOH A 104 293 149 HOH HOH . I 6 HOH A 105 294 152 HOH HOH . I 6 HOH A 106 295 155 HOH HOH . I 6 HOH A 107 296 156 HOH HOH . I 6 HOH A 108 297 157 HOH HOH . I 6 HOH A 109 298 160 HOH HOH . I 6 HOH A 110 299 164 HOH HOH . I 6 HOH A 111 300 165 HOH HOH . I 6 HOH A 112 301 166 HOH HOH . I 6 HOH A 113 302 167 HOH HOH . I 6 HOH A 114 303 171 HOH HOH . I 6 HOH A 115 304 173 HOH HOH . I 6 HOH A 116 305 174 HOH HOH . I 6 HOH A 117 306 175 HOH HOH . I 6 HOH A 118 307 177 HOH HOH . I 6 HOH A 119 308 178 HOH HOH . I 6 HOH A 120 309 179 HOH HOH . I 6 HOH A 121 310 181 HOH HOH . I 6 HOH A 122 311 186 HOH HOH . I 6 HOH A 123 312 188 HOH HOH . I 6 HOH A 124 313 189 HOH HOH . J 6 HOH B 1 13 13 HOH HOH . J 6 HOH B 2 42 24 HOH HOH . J 6 HOH B 3 43 25 HOH HOH . J 6 HOH B 4 68 68 HOH HOH . J 6 HOH B 5 98 98 HOH HOH . J 6 HOH B 6 124 124 HOH HOH . J 6 HOH B 7 159 159 HOH HOH . J 6 HOH B 8 190 190 HOH HOH . J 6 HOH B 9 204 204 HOH HOH . K 6 HOH C 1 190 1 HOH HOH . K 6 HOH C 2 191 4 HOH HOH . K 6 HOH C 3 192 5 HOH HOH . K 6 HOH C 4 193 11 HOH HOH . K 6 HOH C 5 194 194 HOH HOH . K 6 HOH C 6 195 15 HOH HOH . K 6 HOH C 7 196 22 HOH HOH . K 6 HOH C 8 197 197 HOH HOH . K 6 HOH C 9 198 29 HOH HOH . K 6 HOH C 10 199 30 HOH HOH . K 6 HOH C 11 200 31 HOH HOH . K 6 HOH C 12 201 201 HOH HOH . K 6 HOH C 13 202 33 HOH HOH . K 6 HOH C 14 203 34 HOH HOH . K 6 HOH C 15 204 37 HOH HOH . K 6 HOH C 16 205 38 HOH HOH . K 6 HOH C 17 206 39 HOH HOH . K 6 HOH C 18 207 207 HOH HOH . K 6 HOH C 19 208 40 HOH HOH . K 6 HOH C 20 209 209 HOH HOH . K 6 HOH C 21 210 44 HOH HOH . K 6 HOH C 22 211 45 HOH HOH . K 6 HOH C 23 212 47 HOH HOH . K 6 HOH C 24 213 213 HOH HOH . K 6 HOH C 25 214 214 HOH HOH . K 6 HOH C 26 215 215 HOH HOH . K 6 HOH C 27 216 49 HOH HOH . K 6 HOH C 28 217 217 HOH HOH . K 6 HOH C 29 218 54 HOH HOH . K 6 HOH C 30 219 56 HOH HOH . K 6 HOH C 31 220 59 HOH HOH . K 6 HOH C 32 221 61 HOH HOH . K 6 HOH C 33 222 62 HOH HOH . K 6 HOH C 34 223 64 HOH HOH . K 6 HOH C 35 224 67 HOH HOH . K 6 HOH C 36 225 71 HOH HOH . K 6 HOH C 37 226 73 HOH HOH . K 6 HOH C 38 227 79 HOH HOH . K 6 HOH C 39 228 81 HOH HOH . K 6 HOH C 40 229 28 HOH HOH . K 6 HOH C 41 230 84 HOH HOH . K 6 HOH C 42 231 89 HOH HOH . K 6 HOH C 43 232 91 HOH HOH . K 6 HOH C 44 233 94 HOH HOH . K 6 HOH C 45 234 96 HOH HOH . K 6 HOH C 46 235 102 HOH HOH . K 6 HOH C 47 236 104 HOH HOH . K 6 HOH C 48 237 109 HOH HOH . K 6 HOH C 49 238 110 HOH HOH . K 6 HOH C 50 239 115 HOH HOH . K 6 HOH C 51 240 117 HOH HOH . K 6 HOH C 52 241 120 HOH HOH . K 6 HOH C 53 242 121 HOH HOH . K 6 HOH C 54 243 122 HOH HOH . K 6 HOH C 55 244 127 HOH HOH . K 6 HOH C 56 245 132 HOH HOH . K 6 HOH C 57 246 133 HOH HOH . K 6 HOH C 58 247 139 HOH HOH . K 6 HOH C 59 248 141 HOH HOH . K 6 HOH C 60 249 142 HOH HOH . K 6 HOH C 61 250 143 HOH HOH . K 6 HOH C 62 251 144 HOH HOH . K 6 HOH C 63 252 145 HOH HOH . K 6 HOH C 64 253 147 HOH HOH . K 6 HOH C 65 254 150 HOH HOH . K 6 HOH C 66 255 151 HOH HOH . K 6 HOH C 67 256 153 HOH HOH . K 6 HOH C 68 257 154 HOH HOH . K 6 HOH C 69 258 158 HOH HOH . K 6 HOH C 70 259 162 HOH HOH . K 6 HOH C 71 260 163 HOH HOH . K 6 HOH C 72 261 168 HOH HOH . K 6 HOH C 73 262 169 HOH HOH . K 6 HOH C 74 263 170 HOH HOH . K 6 HOH C 75 264 172 HOH HOH . K 6 HOH C 76 265 176 HOH HOH . K 6 HOH C 77 266 180 HOH HOH . K 6 HOH C 78 267 183 HOH HOH . K 6 HOH C 79 268 184 HOH HOH . K 6 HOH C 80 269 185 HOH HOH . K 6 HOH C 81 270 187 HOH HOH . L 6 HOH D 1 12 12 HOH HOH . L 6 HOH D 2 42 20 HOH HOH . L 6 HOH D 3 43 21 HOH HOH . L 6 HOH D 4 78 78 HOH HOH . L 6 HOH D 5 90 90 HOH HOH . L 6 HOH D 6 161 161 HOH HOH . L 6 HOH D 7 182 182 HOH HOH . L 6 HOH D 8 229 82 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 182.071 _atom_site.Cartn_y 8.532 _atom_site.Cartn_z 64.155 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.85 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 901 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #