data_3LPT # _model_server_result.job_id HPTPliKL0QmDq7q4ZVxiyQ _model_server_result.datetime_utc '2024-11-24 11:43:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lpt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2}' # _entry.id 3LPT # _exptl.entry_id 3LPT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3LPT _cell.length_a 72 _cell.length_b 72 _cell.length_c 65.49 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LPT _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 18 A ASP 64 1_555 A N CAF 19 A CAF 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C CAF 19 A CAF 65 1_555 A N THR 20 A THR 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C ALA 83 A ALA 129 1_555 A N CAF 84 A CAF 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C CAF 84 A CAF 130 1_555 A N TRP 85 A TRP 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 331 n n C1 C2 PEG sing 332 n n C1 H11 PEG sing 333 n n C1 H12 PEG sing 334 n n O1 HO1 PEG sing 335 n n C2 O2 PEG sing 336 n n C2 H21 PEG sing 337 n n C2 H22 PEG sing 338 n n O2 C3 PEG sing 339 n n C3 C4 PEG sing 340 n n C3 H31 PEG sing 341 n n C3 H32 PEG sing 342 n n C4 O4 PEG sing 343 n n C4 H41 PEG sing 344 n n C4 H42 PEG sing 345 n n O4 HO4 PEG sing 346 n n # _atom_sites.entry_id 3LPT _atom_sites.fract_transf_matrix[1][1] 0.013889 _atom_sites.fract_transf_matrix[1][2] 0.008019 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016038 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01527 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 723 A 1 1 1 723 723 . C 3 PEG A 1 213 1 PEG PEG . D 3 PEG A 1 2 2 PEG PEG . E 3 PEG A 1 3 3 PEG PEG . F 4 P03 A 1 4 4 P03 P03 . G 3 PEG A 1 5 5 PEG PEG . H 5 SO4 A 1 470 470 SO4 SO4 . I 5 SO4 A 1 471 471 SO4 SO4 . J 5 SO4 A 1 472 472 SO4 SO4 . K 6 CA A 1 473 473 CA CA . L 7 CL A 1 474 474 CL CL . M 8 HOH A 1 304 304 HOH HOH . M 8 HOH A 2 305 305 HOH HOH . M 8 HOH A 3 306 306 HOH HOH . M 8 HOH A 4 307 307 HOH HOH . M 8 HOH A 5 308 308 HOH HOH . M 8 HOH A 6 309 309 HOH HOH . M 8 HOH A 7 310 310 HOH HOH . M 8 HOH A 8 312 312 HOH HOH . M 8 HOH A 9 313 313 HOH HOH . M 8 HOH A 10 314 314 HOH HOH . M 8 HOH A 11 315 315 HOH HOH . M 8 HOH A 12 316 316 HOH HOH . M 8 HOH A 13 317 317 HOH HOH . M 8 HOH A 14 320 320 HOH HOH . M 8 HOH A 15 321 321 HOH HOH . M 8 HOH A 16 322 322 HOH HOH . M 8 HOH A 17 324 324 HOH HOH . M 8 HOH A 18 326 326 HOH HOH . M 8 HOH A 19 327 327 HOH HOH . M 8 HOH A 20 330 330 HOH HOH . M 8 HOH A 21 333 333 HOH HOH . M 8 HOH A 22 336 336 HOH HOH . M 8 HOH A 23 339 339 HOH HOH . M 8 HOH A 24 341 341 HOH HOH . M 8 HOH A 25 344 344 HOH HOH . M 8 HOH A 26 347 347 HOH HOH . M 8 HOH A 27 349 349 HOH HOH . M 8 HOH A 28 351 351 HOH HOH . M 8 HOH A 29 354 354 HOH HOH . M 8 HOH A 30 358 358 HOH HOH . M 8 HOH A 31 360 360 HOH HOH . M 8 HOH A 32 361 361 HOH HOH . M 8 HOH A 33 363 363 HOH HOH . M 8 HOH A 34 371 371 HOH HOH . M 8 HOH A 35 373 373 HOH HOH . M 8 HOH A 36 377 377 HOH HOH . M 8 HOH A 37 378 378 HOH HOH . M 8 HOH A 38 379 379 HOH HOH . M 8 HOH A 39 381 381 HOH HOH . M 8 HOH A 40 384 384 HOH HOH . M 8 HOH A 41 386 386 HOH HOH . M 8 HOH A 42 388 388 HOH HOH . M 8 HOH A 43 390 390 HOH HOH . M 8 HOH A 44 391 391 HOH HOH . M 8 HOH A 45 392 392 HOH HOH . M 8 HOH A 46 394 394 HOH HOH . M 8 HOH A 47 395 395 HOH HOH . M 8 HOH A 48 397 397 HOH HOH . M 8 HOH A 49 398 398 HOH HOH . M 8 HOH A 50 401 401 HOH HOH . M 8 HOH A 51 402 402 HOH HOH . M 8 HOH A 52 403 403 HOH HOH . M 8 HOH A 53 404 404 HOH HOH . M 8 HOH A 54 405 405 HOH HOH . M 8 HOH A 55 406 406 HOH HOH . M 8 HOH A 56 414 414 HOH HOH . M 8 HOH A 57 415 415 HOH HOH . M 8 HOH A 58 418 418 HOH HOH . M 8 HOH A 59 425 425 HOH HOH . M 8 HOH A 60 426 426 HOH HOH . M 8 HOH A 61 428 428 HOH HOH . M 8 HOH A 62 429 429 HOH HOH . M 8 HOH A 63 431 431 HOH HOH . M 8 HOH A 64 432 432 HOH HOH . M 8 HOH A 65 434 434 HOH HOH . M 8 HOH A 66 438 438 HOH HOH . M 8 HOH A 67 441 441 HOH HOH . M 8 HOH A 68 442 442 HOH HOH . M 8 HOH A 69 443 443 HOH HOH . M 8 HOH A 70 444 444 HOH HOH . M 8 HOH A 71 445 445 HOH HOH . M 8 HOH A 72 446 446 HOH HOH . M 8 HOH A 73 447 447 HOH HOH . M 8 HOH A 74 448 448 HOH HOH . M 8 HOH A 75 449 449 HOH HOH . M 8 HOH A 76 450 450 HOH HOH . M 8 HOH A 77 451 451 HOH HOH . M 8 HOH A 78 452 452 HOH HOH . M 8 HOH A 79 453 453 HOH HOH . M 8 HOH A 80 454 454 HOH HOH . M 8 HOH A 81 455 455 HOH HOH . M 8 HOH A 82 456 456 HOH HOH . M 8 HOH A 83 457 457 HOH HOH . M 8 HOH A 84 458 458 HOH HOH . M 8 HOH A 85 459 459 HOH HOH . M 8 HOH A 86 460 460 HOH HOH . M 8 HOH A 87 461 461 HOH HOH . M 8 HOH A 88 462 462 HOH HOH . M 8 HOH A 89 463 463 HOH HOH . M 8 HOH A 90 464 464 HOH HOH . M 8 HOH A 91 465 465 HOH HOH . M 8 HOH A 92 466 466 HOH HOH . M 8 HOH A 93 467 467 HOH HOH . M 8 HOH A 94 468 468 HOH HOH . M 8 HOH A 95 469 469 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 3 13.658 17.321 -15.364 1 66.21 ? C1 PEG 2 A 1 HETATM 2 O O1 PEG . . . D 3 13.41 16.51 -14.21 1 66.41 ? O1 PEG 2 A 1 HETATM 3 C C2 PEG . . . D 3 15.086 17.093 -15.841 1 66.42 ? C2 PEG 2 A 1 HETATM 4 O O2 PEG . . . D 3 16.009 17.603 -14.879 1 66.67 ? O2 PEG 2 A 1 HETATM 5 C C3 PEG . . . D 3 16.892 18.572 -15.448 1 66.66 ? C3 PEG 2 A 1 HETATM 6 C C4 PEG . . . D 3 18.345 18.159 -15.224 1 66.44 ? C4 PEG 2 A 1 HETATM 7 O O4 PEG . . . D 3 18.875 18.822 -14.069 1 65.89 ? O4 PEG 2 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 226 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #