data_3LPU # _model_server_result.job_id OxN3YaIIUaakdtkF2CTWuQ _model_server_result.datetime_utc '2024-12-01 01:15:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lpu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3LPU # _exptl.entry_id 3LPU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 353.842 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2-(6-chloro-2-methyl-4-phenylquinolin-3-yl)pentanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3LPU _cell.length_a 72.05 _cell.length_b 72.05 _cell.length_c 66.35 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LPU _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 18 A ASP 64 1_555 A N CAF 19 A CAF 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C CAF 19 A CAF 65 1_555 A N THR 20 A THR 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale3 A C ALA 83 A ALA 129 1_555 A N CAF 84 A CAF 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 A C CAF 84 A CAF 130 1_555 A N TRP 85 A TRP 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C21 H20 Cl N O2' _chem_comp.formula_weight 353.842 _chem_comp.id 976 _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2-(6-chloro-2-methyl-4-phenylquinolin-3-yl)pentanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C4 976 doub 1 n y N C7 976 sing 2 n y CL C1 976 sing 3 n n C1 C2 976 sing 4 n y C1 C6 976 doub 5 n y O1 C12 976 doub 6 n n C2 C3 976 doub 7 n y O2 C12 976 sing 8 n n C3 C4 976 sing 9 n y C4 C5 976 sing 10 n y C5 C6 976 sing 11 n y C5 C9 976 doub 12 n y C7 C8 976 doub 13 n y C7 C16 976 sing 14 n n C8 C9 976 sing 15 n y C8 C11 976 sing 16 n n C9 C10 976 sing 17 n y C10 C17 976 doub 18 n y C10 C21 976 sing 19 n y C11 C12 976 sing 20 n n C11 C13 976 sing 21 n n C13 C14 976 sing 22 n n C14 C15 976 sing 23 n n C17 C18 976 sing 24 n y C18 C19 976 doub 25 n y C19 C20 976 sing 26 n y C20 C21 976 doub 27 n y C2 H2 976 sing 28 n n O2 HO2 976 sing 29 n n C3 H3 976 sing 30 n n C6 H6 976 sing 31 n n C11 H11 976 sing 32 n n C13 H13 976 sing 33 n n C13 H13A 976 sing 34 n n C14 H14 976 sing 35 n n C14 H14A 976 sing 36 n n C15 H15 976 sing 37 n n C15 H15A 976 sing 38 n n C15 H15B 976 sing 39 n n C16 H16 976 sing 40 n n C16 H16A 976 sing 41 n n C16 H16B 976 sing 42 n n C17 H17 976 sing 43 n n C18 H18 976 sing 44 n n C19 H19 976 sing 45 n n C20 H20 976 sing 46 n n C21 H21 976 sing 47 n n # _atom_sites.entry_id 3LPU _atom_sites.fract_transf_matrix[1][1] 0.013879 _atom_sites.fract_transf_matrix[1][2] 0.008013 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016026 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015072 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 976 A 1 1 1 976 976 . C 3 P03 A 1 213 1 P03 P03 . D 4 PEG A 1 2 2 PEG P01 . E 4 PEG A 1 3 3 PEG P01 . F 5 SO4 A 1 497 497 SO4 SO4 . G 5 SO4 A 1 498 498 SO4 SO4 . H 5 SO4 A 1 499 499 SO4 SO4 . I 6 CA A 1 500 500 CA CA . J 7 HOH A 1 304 304 HOH HOH . J 7 HOH A 2 305 305 HOH HOH . J 7 HOH A 3 306 306 HOH HOH . J 7 HOH A 4 307 307 HOH HOH . J 7 HOH A 5 308 308 HOH HOH . J 7 HOH A 6 309 309 HOH HOH . J 7 HOH A 7 310 310 HOH HOH . J 7 HOH A 8 312 312 HOH HOH . J 7 HOH A 9 313 313 HOH HOH . J 7 HOH A 10 314 314 HOH HOH . J 7 HOH A 11 315 315 HOH HOH . J 7 HOH A 12 316 316 HOH HOH . J 7 HOH A 13 317 317 HOH HOH . J 7 HOH A 14 320 320 HOH HOH . J 7 HOH A 15 321 321 HOH HOH . J 7 HOH A 16 322 322 HOH HOH . J 7 HOH A 17 324 324 HOH HOH . J 7 HOH A 18 326 326 HOH HOH . J 7 HOH A 19 327 327 HOH HOH . J 7 HOH A 20 330 330 HOH HOH . J 7 HOH A 21 333 333 HOH HOH . J 7 HOH A 22 336 336 HOH HOH . J 7 HOH A 23 339 339 HOH HOH . J 7 HOH A 24 341 341 HOH HOH . J 7 HOH A 25 344 344 HOH HOH . J 7 HOH A 26 345 345 HOH HOH . J 7 HOH A 27 347 347 HOH HOH . J 7 HOH A 28 349 349 HOH HOH . J 7 HOH A 29 350 350 HOH HOH . J 7 HOH A 30 351 351 HOH HOH . J 7 HOH A 31 352 352 HOH HOH . J 7 HOH A 32 354 354 HOH HOH . J 7 HOH A 33 356 356 HOH HOH . J 7 HOH A 34 358 358 HOH HOH . J 7 HOH A 35 360 360 HOH HOH . J 7 HOH A 36 361 361 HOH HOH . J 7 HOH A 37 362 362 HOH HOH . J 7 HOH A 38 363 363 HOH HOH . J 7 HOH A 39 366 366 HOH HOH . J 7 HOH A 40 371 371 HOH HOH . J 7 HOH A 41 373 373 HOH HOH . J 7 HOH A 42 377 377 HOH HOH . J 7 HOH A 43 379 379 HOH HOH . J 7 HOH A 44 381 381 HOH HOH . J 7 HOH A 45 384 384 HOH HOH . J 7 HOH A 46 386 386 HOH HOH . J 7 HOH A 47 388 388 HOH HOH . J 7 HOH A 48 389 389 HOH HOH . J 7 HOH A 49 390 390 HOH HOH . J 7 HOH A 50 392 392 HOH HOH . J 7 HOH A 51 394 394 HOH HOH . J 7 HOH A 52 395 395 HOH HOH . J 7 HOH A 53 396 396 HOH HOH . J 7 HOH A 54 397 397 HOH HOH . J 7 HOH A 55 400 400 HOH HOH . J 7 HOH A 56 401 401 HOH HOH . J 7 HOH A 57 402 402 HOH HOH . J 7 HOH A 58 403 403 HOH HOH . J 7 HOH A 59 404 404 HOH HOH . J 7 HOH A 60 405 405 HOH HOH . J 7 HOH A 61 406 406 HOH HOH . J 7 HOH A 62 407 407 HOH HOH . J 7 HOH A 63 408 408 HOH HOH . J 7 HOH A 64 410 410 HOH HOH . J 7 HOH A 65 411 411 HOH HOH . J 7 HOH A 66 412 412 HOH HOH . J 7 HOH A 67 413 413 HOH HOH . J 7 HOH A 68 414 414 HOH HOH . J 7 HOH A 69 415 415 HOH HOH . J 7 HOH A 70 416 416 HOH HOH . J 7 HOH A 71 418 418 HOH HOH . J 7 HOH A 72 420 420 HOH HOH . J 7 HOH A 73 421 421 HOH HOH . J 7 HOH A 74 423 423 HOH HOH . J 7 HOH A 75 425 425 HOH HOH . J 7 HOH A 76 427 427 HOH HOH . J 7 HOH A 77 428 428 HOH HOH . J 7 HOH A 78 429 429 HOH HOH . J 7 HOH A 79 430 430 HOH HOH . J 7 HOH A 80 431 431 HOH HOH . J 7 HOH A 81 432 432 HOH HOH . J 7 HOH A 82 434 434 HOH HOH . J 7 HOH A 83 435 435 HOH HOH . J 7 HOH A 84 441 441 HOH HOH . J 7 HOH A 85 449 449 HOH HOH . J 7 HOH A 86 450 450 HOH HOH . J 7 HOH A 87 451 451 HOH HOH . J 7 HOH A 88 452 452 HOH HOH . J 7 HOH A 89 453 453 HOH HOH . J 7 HOH A 90 454 454 HOH HOH . J 7 HOH A 91 455 455 HOH HOH . J 7 HOH A 92 456 456 HOH HOH . J 7 HOH A 93 457 457 HOH HOH . J 7 HOH A 94 458 458 HOH HOH . J 7 HOH A 95 459 459 HOH HOH . J 7 HOH A 96 460 460 HOH HOH . J 7 HOH A 97 461 461 HOH HOH . J 7 HOH A 98 462 462 HOH HOH . J 7 HOH A 99 463 463 HOH HOH . J 7 HOH A 100 464 464 HOH HOH . J 7 HOH A 101 465 465 HOH HOH . J 7 HOH A 102 466 466 HOH HOH . J 7 HOH A 103 467 467 HOH HOH . J 7 HOH A 104 468 468 HOH HOH . J 7 HOH A 105 470 470 HOH HOH . J 7 HOH A 106 471 471 HOH HOH . J 7 HOH A 107 472 472 HOH HOH . J 7 HOH A 108 473 473 HOH HOH . J 7 HOH A 109 474 474 HOH HOH . J 7 HOH A 110 476 476 HOH HOH . J 7 HOH A 111 477 477 HOH HOH . J 7 HOH A 112 478 478 HOH HOH . J 7 HOH A 113 479 479 HOH HOH . J 7 HOH A 114 480 480 HOH HOH . J 7 HOH A 115 481 481 HOH HOH . J 7 HOH A 116 482 482 HOH HOH . J 7 HOH A 117 483 483 HOH HOH . J 7 HOH A 118 484 484 HOH HOH . J 7 HOH A 119 485 485 HOH HOH . J 7 HOH A 120 486 486 HOH HOH . J 7 HOH A 121 487 487 HOH HOH . J 7 HOH A 122 492 492 HOH HOH . J 7 HOH A 123 494 494 HOH HOH . J 7 HOH A 124 495 495 HOH HOH . J 7 HOH A 125 496 496 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N 976 . . . B 2 37.44 33.969 5.673 1 33.87 ? N 976 1 A 1 HETATM 2 CL CL 976 . . . B 2 39.814 28.522 6.101 1 39 ? CL 976 1 A 1 HETATM 3 C C1 976 . . . B 2 39.111 30.159 5.964 1 36.06 ? C1 976 1 A 1 HETATM 4 O O1 976 . . . B 2 34.375 33.776 8.719 1 29.13 ? O1 976 1 A 1 HETATM 5 C C2 976 . . . B 2 39.905 31.258 5.639 1 35.53 ? C2 976 1 A 1 HETATM 6 O O2 976 . . . B 2 32.637 34.875 8.022 1 26.43 ? O2 976 1 A 1 HETATM 7 C C3 976 . . . B 2 39.365 32.541 5.539 1 34.8 ? C3 976 1 A 1 HETATM 8 C C4 976 . . . B 2 38.006 32.737 5.762 1 34.03 ? C4 976 1 A 1 HETATM 9 C C5 976 . . . B 2 37.182 31.549 6.105 1 33.78 ? C5 976 1 A 1 HETATM 10 C C6 976 . . . B 2 37.752 30.295 6.197 1 34.2 ? C6 976 1 A 1 HETATM 11 C C7 976 . . . B 2 36.112 34.189 5.891 1 33.49 ? C7 976 1 A 1 HETATM 12 C C8 976 . . . B 2 35.189 33.08 6.239 0.5 32.16 ? C8 976 1 A 1 HETATM 13 C C9 976 . . . B 2 35.739 31.727 6.36 1 31.98 ? C9 976 1 A 1 HETATM 14 C C10 976 . . . B 2 34.885 30.567 6.685 1 30.93 ? C10 976 1 A 1 HETATM 15 C C11 976 . . . B 2 33.747 33.284 6.484 1 30.24 ? C11 976 1 A 1 HETATM 16 C C12 976 . . . B 2 33.601 33.995 7.804 0.5 28.83 ? C12 976 1 A 1 HETATM 17 C C13 976 . . . B 2 33.134 34.07 5.324 1 30.16 ? C13 976 1 A 1 HETATM 18 C C14 976 . . . B 2 32.858 33.163 4.125 1 30.45 ? C14 976 1 A 1 HETATM 19 C C15 976 . . . B 2 31.87 32.064 4.466 1 28.84 ? C15 976 1 A 1 HETATM 20 C C16 976 . . . B 2 35.557 35.583 5.775 1 34.18 ? C16 976 1 A 1 HETATM 21 C C17 976 . . . B 2 34.51 30.286 7.99 1 30.86 ? C17 976 1 A 1 HETATM 22 C C18 976 . . . B 2 33.711 29.177 8.235 1 30.96 ? C18 976 1 A 1 HETATM 23 C C19 976 . . . B 2 33.293 28.354 7.192 1 30.7 ? C19 976 1 A 1 HETATM 24 C C20 976 . . . B 2 33.672 28.645 5.887 1 30.62 ? C20 976 1 A 1 HETATM 25 C C21 976 . . . B 2 34.473 29.754 5.637 1 30.54 ? C21 976 1 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 25 #